Rissa tridactyla (black-legged kittiwake): 128908898
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Entry
128908898 CDS
T09443
Symbol
TRPM5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtd04040
]
128908898 (TRPM5)
Ion channels [BR:
rtd04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128908898 (TRPM5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Mso1_Sec1_bdg
Motif
Other DBs
NCBI-GeneID:
128908898
NCBI-ProteinID:
XP_054055853
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Position
4:18020822..18061311
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AA seq
1172 aa
AA seq
DB search
MEEMETKLCSPDKEAAFKREPPYCIGEIDFTASGKKRGKFIKVPSTIHPGIIFEVMLNKW
KLPAPNLVVSLVGEEENFQMKPWLRDTLKKGLIKAAQSTGAWIFTSALRVGITRHLVQAV
RDHALASTSSKVRVITIGITSLRKTQHREILDNTKNESLVHYESDDNIQGPLYSLDHNHS
HFILVDHITPDEPDGTTKLRLTLEKHISEQRTGYGGTGSIEIPVLCLLVNGGPGTLERIC
SGLENSAPWLILAGSGGTADVLAAFVNDPQLIMPEAVEKQFKEKFPAERFLWKDILQWTA
TIQNIVSHQHLLTLHNFEQDGSEELDTVILKALVKACKSHSQDAQEYLDELKLAVAWNRV
DIAKSEIFNGDVEWKSCDLEEVMMDALVNDKPEFVKLFVDNGANISEFLTYSRLQRLYCS
ISQKCLLYELLLKKHEESKRTLAGLTGQQHKEQKEISPLFTLGEVSRVLKDFLHDACKGF
YQDLRHGGKKKYDKMNTKQVPGPLDMNQKSENPWRDLFVWAVLQNRHKMANYFWAMGQEG
VASALAACKILKEMSRLETETEVARIMKEAKYEQLAVELFSECYHNSEERAFALLVRKNQ
YWSKTTCLQLATEAEARSFFAHDGVQAFLTKIWWGDMSTSTQILKLICGFWCPFLIYTNL
IAFSEEKQSKNESEPFRDLDSLDTERTPFFSKEEDRGNGKMEKQNPSENTAWATFMFTRW
RKFWSAPVTVFVGNVIMYFAFLFLFTYVLLLDFKPPPPEGPSAKEFILYFWVFTLVLEEI
RQSFYTDEDTNLRKKFKLYVEDNWNKCDMVTIFLFIIGVTCRMLNSTFQAGRTILAIDFM
VFTLRLIHIFAIHKQLGPKIIIVERMMKDVFFFLFFLSVWLIAYGVTTQALLHPDDSRAE
WIFRRVLYRPYLQIFGQIPLDEIDTSRMYPRNCTVNPLQILQQNSPSCPNSYANWVVILL
LVIFLLVTNVLLMNLLIAMFSYTFQVVQGNADIFWKIQRYNLIVEYHGRPALAPPFIIIN
HITLVLRRIFNKTQHKKEHLERDLPIGLDQKIITWELVQKENYLVNLEQERKESNEERLK
ATSNKVDNLSKYFSGLKEQEKRFKVMEAQICYCTAVISSMAELLTKTNLLCNQPAPSYTC
VTNANTEVPLPERSEREERTNQSKTDITYIDN
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatggaaaccaagctctgcagccctgacaaagaagcagctttcaaaagagaa
ccaccatactgcataggagaaatagacttcacagcttctgggaagaaacgtggaaagttt
attaaggtcccaagtaccattcatcctggaattatattcgaagttatgctcaacaaatgg
aagctaccagctcccaatttggttgtctcgttagtaggggaagaagaaaatttccagatg
aagccttggctacgggacaccttaaaaaaaggacttataaaggccgctcaaagcacaggt
gcctggatttttaccagtgctttacgtgtaggaataacaagacacttagtgcaagcagtc
cgagatcacgcactggctagtacttcatccaaagtaagagtgattaccataggaataact
tcactcagaaaaactcagcacagagaaattctggacaacacaaagaatgaaagtcttgta
cactatgaatcagatgataatatccaaggcccactgtattccctggaccacaaccattcc
cattttattttggtggatcacataaccccagatgagccagatggaaccactaagctacgt
ctcaccttggaaaagcatatttcagaacagcgtactggatatggtggaacaggtagcatt
gagatccctgtgctttgcttactggtaaacggaggaccaggcacacttgagagaatttgc
agcggtttggaaaattctgctccctggcttatcttagcagggtctggaggtacagccgac
gtcttagctgcatttgtgaatgacccacagcttatcatgccagaagctgttgaaaagcaa
tttaaggagaaattccctgcagaaaggttcttgtggaaggacattcttcaatggacagca
acaattcagaacattgtttcacaccaacatcttctaactctgcacaactttgagcaagat
ggttcagaagaactagacacagtcattttaaaagctttagtaaaagcctgtaaaagtcac
agtcaggatgctcaggaatatctggatgaactgaagctggcagtggcctggaatagagtg
gacatagctaaaagtgaaattttcaatggtgacgtggaatggaagtcctgtgacctggaa
gaagtgatgatggatgctctggtcaatgacaagccagaatttgtaaaattatttgttgac
aatggggctaacatatctgaattcctgacatatagtcgtctgcagagactctactgttcc
atttctcagaagtgtctcctctatgaacttctactgaagaaacatgaagaaagcaagcga
actttggcagggctcactggtcaacagcataaggaacagaaggagatcagcccactcttc
actctcggtgaggtctctagagttctcaaggattttctccatgatgcatgcaaaggtttc
tatcaagaccttagacatggaggcaagaagaaatacgataaaatgaatacaaagcaagta
cctggacccttggatatgaaccagaaaagtgaaaatccttggagagatttgtttgtatgg
gcagtacttcaaaaccggcacaagatggcaaactatttctgggctatgggtcaggagggt
gtagcttcagctctggcagcctgcaagatccttaaagagatgtcccgcttggagacggaa
accgaagtagcacgtataatgaaagaggccaagtatgagcagctcgctgttgaactgttt
agtgaatgctaccacaatagcgaggagagagcgtttgctctgttggtgaggaaaaatcag
tactggagcaaaaccacctgccttcagctggctacagaagcggaggcaaggtctttcttt
gcacatgatggtgtccaggccttcctgacgaaaatatggtggggagacatgtctacaagc
acacagattctgaagttaatctgtggattctggtgtcctttcctaatttacacaaattta
atagcattcagtgaggaaaaacaatcaaagaatgagtcagagccatttagagatctggac
agtttagatacagagaggactccgtttttttccaaggaagaagatagaggaaatggtaaa
atggaaaagcaaaacccttctgaaaacacagcgtgggcgacattcatgtttactcggtgg
agaaaattctggagtgcccctgtaactgtatttgtggggaatgttataatgtactttgct
tttctgtttctatttacttacgtccttttactggacttcaaaccacctccacctgagggt
ccatctgctaaagaatttatactttacttctgggtttttaccctggtcttggaagaaatc
cgacagagtttctatacagatgaagacacaaatttaaggaaaaaatttaagctgtatgtg
gaggataactggaataaatgtgatatggtgaccatcttcctcttcataatcggggtaacc
tgcagaatgctgaactcaacttttcaagctggccgtacaatacttgccattgattttatg
gtgtttacacttagacttatacatatttttgcaattcacaaacaacttggaccaaagatc
ataattgtggaaaggatgatgaaggatgttttcttctttctgtttttcttgagtgtgtgg
ctcattgcctatggtgtgacaactcaagctctacttcatcctgatgacagccgagcggaa
tggatattcaggagggtgctttatcgtccctaccttcagatatttggccagattccactg
gatgaaatagacacatctcggatgtatcccaggaactgtacagttaatccactgcagatt
ctgcagcagaactcaccatcatgtcctaatagctatgccaactgggtcgtcatacttctg
ttggtcatcttcctgctagtcacaaatgttctccttatgaatctcctgattgctatgttc
agctacacttttcaagttgttcagggcaatgcagacatcttttggaaaattcagcgctac
aacctgattgttgaatatcacggccggcctgccttagcaccaccatttatcattattaac
cacataactctggttctcagaagaatcttcaacaaaacgcaacataaaaaagaacatctg
gaaagagatcttcccattggcctagatcaaaaaatcataacatgggagctggtgcaaaaa
gagaattatcttgtaaaccttgaacaagagaggaaagaaagcaatgaagaaaggctgaag
gccacatctaataaggtggataatttgtctaaatattttagtggattgaaagaacaagaa
aagcggtttaaagttatggaagcccagatttgctactgtacagctgttatctcctcaatg
gcagagcttttaaccaaaaccaacctcttgtgcaaccaaccagctccaagctatacatgt
gtgacgaatgccaatacagaagtgcctttgccagaaagaagtgaaagagaagagcgcaca
aatcagtccaagactgacatcacatacatcgataactga
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