Rissa tridactyla (black-legged kittiwake): 128908925
Help
Entry
128908925 CDS
T09443
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128908925 (TDRD12)
Enzymes [BR:
rtd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
128908925 (TDRD12)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Gene silencing
piRNA pathway
128908925 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
128908925
NCBI-ProteinID:
XP_054055906
LinkDB
All DBs
Position
4:82825563..82858427
Genome browser
AA seq
1234 aa
AA seq
DB search
MEVLVLEIEDPGCFWVTMKGCEPYIVDETEYKNLNAEMNQFYDKSYKDADEVKPLMVKEG
QICVVFSEELRCWCRAVIKSIMYCTDDYQTECFLLDYAKYIFVKSKNIRVALEAFMQIPY
RAKKCRLYRTKPVTLRIDFCEDTAKIVPAKRWDSAATWYFQNLLKATTQVKVKLCAVEDN
TFDVFLYVTIKDEKVCVNDDLVSKNFACFEEAKENMGSSADYQENQMSLNVECLPVKIVN
PALTFRPVLFQEEVSTNHETGLAVSSSFLQETYQRSSTDLNENTASIVKAIPGLPFKENT
AVHTDRLQQFLNCDPLKTHIIEDDQQSVQSLSEERNFVFLSNKIEPSSVLETAPLSDDLK
KELTRKKFLGPSFTESYCWPPVARGCDVVVISYEGNDPFLYIPPVLTFLQSGSCYKGLPN
RNGPLALILCPGWKKAQLVFELLKTYEGCSRQLHPMLIILGQNKEETRSVKIRGCEVIVT
TPYSLLRLFEHQSLLFCRLCHLVLDEIEVLFSDATEQVFTILDCYKKAIITEEWEYSPHQ
IIAVGTHWNKHIAHLIKEFMNDPYIVITAMEEASIYGNVQQVLQPCTYSERTAVLLKTLD
FIDNNLQKVLVFTNSVNEAEMVHEALKSNSIFSLKIHKESEFNFKYILEQWTKKYSSGTH
VVLVLTDDCMQSLGITDATCVIHFSLPSPRIFGQRLHSMSDNFCNVIEDSSVDYEYIKAR
SVILIAENSACHALGILRYLQHAEAEIPPELHDFTAKMLEAEEDKKFSRPLCAYLKIFGI
CKNRTVCPDRHQINLQIDMPQNIPDRVTRTPACVTILPLHIVNATNYFGRIVDKQKDQYT
ILAEEMNDYFKKPSNKTSVKNVEKLAFYGLCEETLFHRVQVVEISPKEEEDLFFKVKIKY
IDEGRISQVQSYQLLHLPARFQRLPPQAVEFVICRVKPIDNEIEWNPKVTSYIHHKIKGK
LHEAKIVHTLGNTAWVDPMVRVTRLSDLKISVNEYNVRSEILATGLGTDNPEHITQLQKL
CGHVEVLDHAKNLKPLGKKEDTADPQNVSSPQNMSVQENSTENHNSSKITSESHPCDGVA
QTKEAEDSTLHQRKCFYPEIKWFQNEETVTVKVKIASEADCKSEFSKEKVVFSACSGDKI
YLADMELYQYILPEKSTCVIKDKEAIIVLTKEKKGAWCKLLKKKNPRVSFDFEHWEDFED
RSPFPVGTKKLYCTTAVTEELVDSSEDSGTESDE
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcttggtattagagattgaagatccaggttgcttttgggttactatgaaagga
tgtgagccttacatagtcgatgaaacagaatataaaaacctgaatgctgaaatgaatcag
ttctatgacaaatcttacaaagatgcagatgaagtaaaaccactaatggtaaaagaaggc
cagatttgtgtggttttcagtgaggaactcagatgctggtgtagagcggttattaagtca
atcatgtactgtacagatgattatcaaacagaatgttttcttctggattatgccaaatac
atttttgttaaatcaaagaacattcgagttgcactggaagcatttatgcagatcccatat
agggcaaagaagtgtagactgtatcgcacaaagccagtgacattgcgtatcgatttttgt
gaagatactgcaaaaatagtaccagccaaaagatgggatagtgctgctacttggtatttt
caaaaccttcttaaagcaactacccaagtgaaagtcaagttatgtgctgtagaagataac
acatttgatgtatttctttatgtgacaataaaggatgaaaaggtatgcgttaatgacgat
cttgtctcaaagaactttgcttgttttgaggaagctaaagagaatatggggagttctgca
gattatcaggagaaccaaatgtcattaaatgttgagtgtcttccagtgaaaattgttaat
cctgcacttactttcaggccagtgctgtttcaggaggaggtatcaacaaatcatgaaaca
ggtcttgctgtttccagttctttccttcaagagacttaccaaaggtcaagcacagatcta
aatgaaaatactgcatctattgtcaaagcaattccaggtttgcctttcaaggaaaataca
gcagttcacacagacaggcttcaacagttcttaaattgtgatcctctgaagactcacata
attgaagatgaccaacagagtgttcaaagtcttagtgaagaaagaaactttgtctttctt
agcaacaaaattgagccatcgtcagttctggaaacagcaccactttctgatgatctgaaa
aaggagcttactcggaaaaaatttttaggtcctagcttcactgaatcctactgttggccg
ccagtagctcgaggatgtgatgtagttgtcatctcgtatgagggaaatgatcctttttta
tatattccaccagttcttacatttttgcagtcgggaagttgctacaaaggcttgccaaac
aggaatggaccactagcacttattttatgtcctgggtggaagaaggcacaacttgttttt
gagctactgaaaacatatgagggatgctccagacagcttcatccaatgttgataatcctt
gggcagaacaaagaagaaactagaagtgtgaaaatccgaggatgtgaagtaatcgtgact
acaccatatagcctcctgagactgtttgaacatcagagtttattattttgtagactttgc
catcttgttcttgatgagattgaggtactgttctctgatgctactgaacaggtttttact
atattagattgttataagaaagccattataactgaagagtgggagtattcaccacatcag
attattgctgttggaactcattggaataaacatatagcacacttgataaaggagtttatg
aatgatccttacattgtgataacagctatggaagaagcttccatctatggaaatgtgcaa
caggttctgcaaccttgcacgtacagtgagagaactgctgtgttactcaaaacactggat
tttattgacaataatcttcagaaggtgctggtattcactaattcagtaaatgaagcagaa
atggttcatgaggcactgaagagcaactccatattttccttgaaaatacataaagagagt
gagtttaatttcaagtatatcttagagcagtggacaaaaaaatacagttctggcactcat
gttgtattagttttaacagatgactgcatgcagtctttgggaattacagacgcaacttgt
gtgatacatttcagtcttccttctccaagaatctttggtcaacgtctacacagcatgtct
gacaacttctgtaatgtgatagaggattcttctgtagattacgaatatataaaggcaagg
tcagtcattttgatagcagaaaacagtgcatgtcatgcacttgggatcctgcgctatttg
caacatgcagaagctgaaattccaccagaactgcatgattttactgcaaagatgctagaa
gctgaagaagataagaaattttcacgaccactgtgtgcctatcttaaaatatttgggatt
tgcaagaatagaacagtgtgtccagatcgtcatcaaattaatttacaaatagacatgcca
cagaatataccagatagagttacacgaacacctgcatgtgtgacaatactacctctccac
attgtaaatgcaacaaactactttggtcgaatagtggataaacaaaaggaccaatataca
attcttgctgaagaaatgaatgactattttaagaaacccagtaataaaacttccgttaaa
aacgtggagaagctagcattttacggattatgtgaggaaacgcttttccacagggttcag
gtggtagagatttctccaaaagaagaggaagacttgttctttaaggtcaaaattaaatat
atagatgaaggcagaataagtcaagttcagagctatcagctgcttcacttacctgcgagg
tttcaacgtctgccacctcaggctgtggaatttgtcatttgtagagtgaaacccattgat
aatgaaattgaatggaacccaaaggtaacaagttatattcatcacaaaattaaaggaaaa
ctacatgaagcaaaaatagtacataccttgggaaacacagcttgggttgaccccatggtc
cgggttaccaggctttcagatttgaagatatcagtcaatgaatacaatgttcgatctgag
attttggctacgggtctgggaactgacaatccagaacatataacacaacttcagaagttg
tgcggacacgtggaagtattagatcatgcaaagaacttgaagcctttaggcaaaaaggag
gatacagcggatccgcagaatgtgtccagtccacagaatatgtcagtgcaagaaaattct
actgaaaaccataattcttctaaaattacttcggagagtcatccatgtgatggtgtagct
caaactaaggaagcagaagactctaccctgcatcagcgtaaatgcttttatccagaaata
aagtggtttcaaaatgaagagactgttacagtgaaggtaaaaatagcaagtgaagctgac
tgtaaaagtgagttctctaaagagaaggtggttttcagtgcttgttcaggagacaagatt
tatttggctgacatggagctgtatcaatatatactaccagaaaagtctacatgtgtgatt
aaggataaagaggctattattgttctcacgaaagagaaaaaaggagcatggtgcaaatta
ctgaagaaaaagaatcctcgtgtgtcttttgattttgaacattgggaagattttgaagat
agaagcccttttccagttggtactaaaaaactgtattgcaccactgcagtaactgaagaa
ttggttgattcctcagaagacagtggaacagaaagcgatgagtaa
DBGET
integrated database retrieval system
