KEGG   Rissa tridactyla (black-legged kittiwake): 128908975
Entry
128908975         CDS       T09443                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128908975 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rtd03400]
    128908975 (TDP1)
DNA repair and recombination proteins [BR:rtd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     128908975 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 128908975
NCBI-ProteinID: XP_054055991
UniProt: A0A7L3SHF9
LinkDB
Position
4:complement(22475514..22524896)
AA seq 607 aa
MLQEGAHGKWTVSSSDESTEENSDSEKPSTSSLLDATRGRTSGPQYPCSDARKAAHKRKA
SPLKLSDKKISTEIPPAEKQRASQEGLGWCLSSSDEEPEDQEKNAHKETLKEEKCDSPKE
HPLNLSKDDELPENQKAEEYDETPSEAQDTWDLLNGGNPFRFFLTKVKGIEQSYNSGALH
IKDILSPLFGTLISSAQFNYCIDVGWLVRQYPQEFRKKPLLIVHGEKRESKAELLAQARP
YENISFCQAKLDIAFGTHHTKMMLLSYEEGLRVVIHTSNLIAEDWHQKTQGIWISPLYPR
LPQGTTGSAGESETNFKSDLISYLMAYNSPVLKEWIDLIQEHDLSETRVYLLGSTPGRYQ
GSDKEKWGHLRLRKLLKEHASSIPAQESWPVVGQFSSIGSMGADGSKWLCSEFQESLVAA
GSSVTTLLKCDVPVHLVYPTVNNVRQSLEGYPAGGSLPYSIQTAQKQLWLHSYFHKWSAE
VSGRSHAIPHIKTYMRPSPDFQKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLF
LPSAFGLEKGYFRVRGKMLSESKDSATYFPVPYDLPPEQYGSKDQPWIWNIPYTDAPDTH
GNMWVPS
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgcttcaggaaggtgcgcatggaaaatggacagtatctagcagtgatgaaagtaccgag
gaaaattctgacagtgaaaaaccgtctacatcttcactactggatgctacacgtggcaga
acgagtggaccacaatatccatgctctgacgctaggaaagctgctcacaagagaaaagct
tctcccctgaagctcagtgataaaaaaatttctacagaaatacctccagcagaaaaacag
agagctagccaagaaggcttaggctggtgtctttctagtagtgatgaagagcctgaagat
caggaaaagaatgcccacaaagaaacactgaaagaagaaaagtgtgattcgcccaaagaa
catcctctgaatcttagcaaagatgatgaactcccagagaatcagaaagcagaggagtat
gatgaaacacccagtgaagcccaagatacctgggatttgttgaatggaggaaaccctttc
aggttttttctcactaaagtcaaaggaattgaacagagctataattctggagccctgcac
ataaaagatattttatctcctctttttgggactctcatatcttctgctcagtttaactac
tgtatagatgtgggatggcttgtaagacagtatccgcaggaattcaggaagaagccattg
ttgatagttcatggcgaaaagagagaatccaaagctgaactgcttgcacaagcacgccct
tatgagaacattagcttttgtcaggctaaactggatattgcatttggaactcaccatacg
aaaatgatgttgttgtcatatgaagaaggtcttcgagttgtgatacatacatccaatctt
attgctgaagattggcaccagaaaactcagggaatatggataagccctttatatccaagg
ctacctcagggaacaactggttctgctggtgaatctgaaactaattttaaatctgaccta
ataagttacttgatggcttacaattctcctgtgctcaaggaatggatagatctgattcaa
gaacatgatttatcagagacaagagtgtatctgcttggttctacccctggacgataccaa
ggtagtgataaagaaaagtggggtcatcttaggctcagaaagcttttgaaagagcatgct
tcatcgataccagcacaggagtcctggcctgttgttggacagttctcaagcattggctca
atgggagctgatgggtccaaatggctttgctcagagttccaggagagcctggtggctgca
ggcagcagtgtgacaactctccttaaatgcgatgttccagttcatctggtttatcctact
gtgaacaatgtgaggcaaagtctggaaggctatcctgctggtggctcacttccgtacagt
atacagacagcacagaaacagctgtggttgcattcctattttcacaaatggtcagcagaa
gtctcgggtcgaagtcatgctatacctcacattaagacatacatgagaccctctcctgat
ttccagaagattgcgtggttcttagttacaagtgccaatctatctaaagcagcttgggga
gctctggagaaaaatggcacccaactgatgatccgttcttatgaacttggagtccttttc
ttgccttcagcatttggattggaaaaaggttacttccgtgtgagagggaaaatgctttca
gaaagtaaagattcagcaacatattttcctgtaccttatgacctgcccccagaacaatac
ggaagcaaagatcagccgtggatttggaacattccttacactgacgcccctgatacacat
ggaaatatgtgggttccatcatga

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