Rissa tridactyla (black-legged kittiwake): 128909001
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Entry
128909001 CDS
T09443
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128909001 (EXOSC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128909001 (EXOSC6)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128909001 (EXOSC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
128909001
NCBI-ProteinID:
XP_054056058
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All DBs
Position
4:72620756..72622381
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AA seq
271 aa
AA seq
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MPLDHRRVRGPEESQPPELWGGTRKDEEEDEDEAPRDPCALRPLFARAGLLSQAEGSAYL
ELGGGTKVLCAAWGPREAGELGATGGGQLLCEFRRAPFAGRGARWRPGTATEREAEREAA
AALREALEPAVRLSRYPRARLAVSALLLQDGGSALAAAISAAALALADAGVEMYDLAVGC
ALCRSPGPAAPWMLQPAEPEERRAVARLTVALLPALNQVSAVLGGGQGSPPDTWAQALRL
GIDGCHRLYPVLRQSLLRAARRRDAAAATTA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggatcaccgccgggtgcggggtccggaggaatcgcagcccccggagctgtgg
gggggaacgaggaaagatgaggaggaggatgaagacgaagcccccagggacccctgcgcc
ttgcggccgctcttcgcccgggccgggctgctgagccaggcggagggctcggcctacctg
gagctgggcggtggaaccaaggtcctctgtgccgcctggggcccgcgggaagctggcgag
ctcggggccacaggaggtggccaactcctctgcgagttccgccgggcccccttcgccggc
cgcggggctcgctggaggccgggcacggcgaccgaacgggaagcggagcgggaagcggcg
gcggctttgcgggaagccttggagccggcggtgcggttgtcccgttacccgcgggctcgg
ctggctgtcagcgctctgctgctgcaggacggtggctcggcgctggcggccgccatcagc
gctgccgccttggccctggccgatgccggggtggagatgtacgatctggcggtgggatgc
gccttgtgccgctctcccggtccggctgctccgtggatgctgcaacctgcagagcccgag
gaacgtcgcgccgtggcccggctcaccgtggctctgctgcccgctctcaaccaagtgtcg
gcagtgctggggggcgggcagggcagccctcccgacacctgggcgcaggcccttcgactc
ggcatcgacggctgccaccgcctctaccctgtgctgcggcagagcctgctgcgggccgcc
cggcgccgcgatgctgctgctgccaccaccgcctga
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