Rissa tridactyla (black-legged kittiwake): 128909061
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Entry
128909061 CDS
T09443
Symbol
CDH5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04514
Cell adhesion molecules
rtd04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128909061 (CDH5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128909061 (CDH5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128909061 (CDH5)
04090 CD molecules [BR:
rtd04090
]
128909061 (CDH5)
Cell adhesion molecules [BR:
rtd04515
]
Cadherins
Major cadherins
128909061 (CDH5)
CD molecules [BR:
rtd04090
]
Proteins
128909061 (CDH5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
LysM2_NFP
Motif
Other DBs
NCBI-GeneID:
128909061
NCBI-ProteinID:
XP_054056211
LinkDB
All DBs
Position
4:complement(84621220..84651236)
Genome browser
AA seq
772 aa
AA seq
DB search
MNHLILLFSLFLAPAFADKESQKTNQNFSSNSASHKRLKRDWIWNQMHIKEEIDTPLPHH
VGKITSSVRNNNAKYIIEGEYANTIFKVEETSGDVYAFERLDREKKAEYELTALIIDRRN
NQSLEPPSKFIIKVYDINDNVPVFVQKVFNGSVPEMSPVGTSVTKVTAVDADDPTVTGHA
TVTYQVIKGDEYFTVDDSGVISTTRADLDRENQSTYEIVVKAKDAPGSSGDSSTATVIIT
LTDINDNFPVFKHPSFHFRVPENISVGGEVGRVKVEDIDEPQHRNTTYSFVRGDYRDTFE
IVANPFTNEGIIRPKKPLDFEKVAEYRFNIEATDPTVDLRYFKVGGSRSISTVTIEVTDV
DEPPVFTKLPYEFKVRENDPEIRTLGSVWAHDPDAAKRKIRFIRRRASPSGDYIRVSDTG
IIQLPKPLDREFSSSYNITVAAQEILEDGRLSDRESHAQVHVIVTDENDNAPELVYPEEP
RVCENAAPGKVIIRISATDKDEISPRGFFKYSLATEDSNFSLVENYDNTANITVKYGQFN
RELAKIHYLPVIISDNGDPELSSTNTLVISVCKCNEKGNFTFCEERAKQVGVSIQALVAI
FICIFTIIIIILLILLRKRHKKDLSGLGRNVAEIHEQLVTYDEEGGGEMDTTSYDVSVLN
SVRKNGIKPELVPSPYAQVQKPPGNPTSGAGEMEMMIEVKKDEADNDRDLLPYDTLHIYG
YEGAESIAESLSSLGSGSSDSDIDYDFLNDWGPRFKMLAELYGSEPNEDFVY
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaccttattctacttttctcattgttcttggctccagcatttgctgacaaagaa
agtcagaaaacaaaccaaaacttttcttcaaacagcgccagtcataaacgactgaagaga
gactggatatggaaccaaatgcatatcaaagaagagattgataccccattaccgcaccac
gttggcaagatcacatcaagcgtaaggaacaacaacgctaagtacattattgaaggtgaa
tatgccaacaccatttttaaagttgaagaaaccagtggtgatgtatatgcatttgagagg
cttgacagagaaaagaaagcagagtatgagctgacagccctcattattgacagaagaaac
aaccagtcactggaacccccatctaaattcattatcaaggtttatgatattaatgataat
gtccctgtgtttgtacaaaaggtattcaatggatctgtcccagaaatgtcaccagtagga
acctcagtcaccaaagtgacagctgtagatgctgatgacccaacagttacaggtcatgcc
acggttacgtaccaagtcattaaaggagacgaatacttcacagttgatgactctggtgtg
atttctacaacaagggctgatctagacagagagaatcaatcaacatatgaaatcgttgtt
aaagcaaaagatgctccagggtcttctggggattcaagcacagctacagtcattatcact
ttaaccgacatcaacgacaacttcccagtattcaaacacccatcatttcactttagagtt
cctgaaaacatttcagtaggaggagaagttggcagagtcaaagtagaagatattgacgaa
ccacaacaccgaaatacaacatacagttttgtcagaggagattacagggatacctttgaa
attgtagcaaatccattcacaaatgaaggaatcattaggccaaagaagcccctggacttc
gaaaaagtagcagaatacaggtttaacattgaagcgacagatcccacagttgatcttcgc
tattttaaagtcggtggctctaggagcatttcaacagtcaccattgaagtcaccgatgtc
gatgagcctccagtcttcactaaactaccatatgaatttaaagtgagggaaaacgatcca
gaaataagaacacttggttcagtttgggcacacgaccccgacgcagctaaacggaaaatc
agatttattcgacgaagagctagtcctagcggagactatattagggtatccgatactgga
attattcaacttcccaagcccctggacagagaattcagttcctcatacaacatcactgtc
gcagctcaggaaatccttgaagatggccgtctttctgacagagaatcacatgcccaagtt
cacgtaatcgttactgatgaaaacgataatgctccagagcttgtctatcctgaggaaccc
agagtgtgtgaaaacgctgcaccaggaaaggtaatcatcaggatttcagctactgacaag
gatgaaatatcacccagaggtttcttcaaatactccctggccacagaagacagcaacttc
tccttggttgagaactacgataacacagctaatatcactgtcaaatatggacagtttaat
cgtgaacttgccaaaatccactacctgcctgtcatcatctcagacaacggtgatcctgag
ctcagcagcacaaatacacttgtcatcagtgtctgcaagtgcaatgaaaaaggcaacttc
actttttgtgaggaaagagctaaacaagttggagtcagtatacaagcactggtggcaatt
tttatctgtatcttcacaatcattataatcatattgctaattcttctaagaaagagacac
aagaaggatttgagcggtcttgggaggaatgtggcagagattcacgagcagcttgtcact
tacgatgaagaaggtggtggggaaatggataccaccagctatgatgtgtccgtcctcaac
tctgtccgcaagaatggtataaagccggaactggtgccctctccgtatgcacaagtccaa
aagcctcctggaaatccaacttctggtgctggagaaatggaaatgatgattgaagtcaag
aaggatgaagccgacaatgacagggatttgctgccttatgacacacttcacatttatggc
tacgaaggtgccgagtccattgcggaatctctcagttctctgggatcgggctcctcagac
tcagatattgattatgactttctaaacgactggggacccaggtttaaaatgttagctgag
ctgtatggatcagaaccaaatgaagattttgtgtattaa
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