Rissa tridactyla (black-legged kittiwake): 128909198
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Entry
128909198 CDS
T09443
Symbol
TRIM66
Name
(RefSeq) tripartite motif-containing protein 66 isoform X1
KO
K12032
tripartite motif-containing protein 66
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128909198 (TRIM66)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128909198 (TRIM66)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
128909198
NCBI-ProteinID:
XP_054056517
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Position
4:13593724..13652962
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AA seq
1277 aa
AA seq
DB search
MSHFVTLRVFDVKLHPTEMETLDLLRNCLVCKWDLRRRDPRMLPCLHSFCKDCLPDLIQG
YSCIPTEYEVLYEGILSCPVCKQTCFARDVVENFFLKDFPTSNSAMAKSCSTCKEKRPAH
SLCTSCNKWLCSSCTEEHRHGKETGDRLLSVSLKGCTATEDEASEFSLFCPVHTQEPLKL
FCETCDTLTCRGCLLTEHKEHRFRHLDEALQNQRVILENVITKVEEKKNGIQVSAKQIED
RLLEVKHLYEKVENQIKMAKMVLMNEINKRTNILLEQLEKITSERKQKLEQQLQSVVVLS
RQVEHVQNFISWAVCSKNSIPFLFSKELIVFQIQRLLETNCNTDIGPPLKIRFTWDPSYW
TKQLSNLGGFTMEGGHISHSDVLLCGSVQGLQTSLYHGHRSPASQLDAVNSQLHQFPPAV
QCPTPVCCSRCLSVPHPNKAQPSYQDINCHQNFQQPPEVREQHFPLQYSMQQHDKEQRDA
PQPLKLTQSGLEQQSQSEPENVSRRMGKHLPSQQTAPLGYAVVSHEAQQVHMSHPQPFRT
QASLQTSTVQVQLGHLQKIKANHLQQPPQQQQQPPASPPSDQNENTHKQVIQQSLDIMHH
QFELEEMKKDLELLLQAQGQSSLQLNQAKPPQHVQQTIVGQINYIVRQPAPVQQQIQDEA
QVCESSTELDAQKPVIPLDKRDSPSLSQSLDEEASVSSHSPESTLQQSAFHPVRKHSASL
SIVGFSNSLEMELPSTRLSSSADLQTQGAAAVTLGPSPNALCDCDAPPESVPSYSLALGR
APSDLSLAAAAGLTPGDALQGSTKCKLENEDFNTADHPLENSLDTAGQDAVNELTFSMQK
VLEEPINLSIKKSQHCTSPSELLSNNFLPVNARMRQLGSKADSNNCEKEHFEMDMKSNQN
VRAGPREQKNPYVRLERLKICTSEAGELPVFKLQPQDNEQEGNFLLIIECGTQSSSMSIK
INKDSPPEGLKSKEENSKDRKLLISQAAGQTQSPPVNTASVDQKLSNGISIMKKSPVTQE
VNPIENEDFCAVCLNGGELLCCDHCPKVFHLSCHVPALLSFPVGEWVCTLCRNPVKPEVE
YDCENTRYSHSCNVQYGLGDCDQKKCEKLVLSLFCSSMSLPFHEPVSPLARHYYQIIKRP
MDLSIIRKKLQKKDKSHYSAPEELVTDVRLMFWNCAKFNYPDSEVAEAGRCLDVFFEGKL
KEIYPDRYFPSMQQEDSDSEEAESQNSKMLPQDFQWPSYGQECIQPKRRRRHAESEKAKR
MMFQPANSLPQPEGWDR
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgagccattttgtgactcttcgtgtttttgatgtcaaacttcatccaacagaaatggag
accctggatctgctgaggaattgtttagtgtgcaaatgggacctgcggaggagagacccc
agaatgctaccttgccttcattccttctgtaaggactgtcttccagatttgattcaagga
tatagctgtattcccactgagtatgaagttctctacgaaggtatcctttcctgtcctgtg
tgcaaacagacctgctttgcaagggatgtagttgaaaatttctttctcaaggactttccc
acttctaattcagctatggcaaagagctgctccacgtgtaaagagaagagacccgctcac
agtctctgtacaagctgcaataagtggttgtgcagctcatgtacagaggaacatagacat
ggcaaggaaactggagaccgcttactttctgtatccctgaagggctgcacagcaactgag
gatgaagcaagcgagttttccttattttgtccagtgcacactcaagagccactcaagctg
ttttgtgagacctgcgatacccttacatgccgcggctgccttctgacagagcacaaggaa
cacaggttcagacaccttgatgaagctttgcagaatcagagagttatcctggaaaatgtc
ataactaaagtggaagagaaaaaaaatgggattcaggtttcagctaaacagatcgaagac
aggttacttgaagtaaaacatttatacgaaaaggtagaaaatcaaataaaaatggccaag
atggttttgatgaatgaaatcaataaacgaacgaacatccttcttgaacaacttgaaaaa
atcaccagtgaaaggaagcagaaattggagcagcaactgcaaagtgttgtggttttaagc
agacaggtagaacatgtgcagaacttcatcagctgggcagtgtgcagtaaaaacagcatc
ccatttctctttagtaaagaactgattgtatttcagatccagcgcttgttagagacaaac
tgtaacacagacataggccctcctctgaagatcagatttacttgggatccctcctactgg
actaaacaactgtccaacttgggaggtttcactatggaaggtggacacatttctcactca
gatgtgctactctgtggaagtgtgcaaggattacagacctctttgtatcatgggcaccgt
tcaccagcgtcacagctggatgctgtgaatagccagctacatcagtttccacctgcagtt
cagtgtcctacacctgtgtgttgctcacgctgcctcagtgtacctcacccaaacaaagct
cagccttcttaccaagacataaactgccatcaaaattttcagcaacctccagaagtgcgt
gagcagcactttcctctgcagtacagcatgcaacaacatgacaaagagcaaagggatgcc
ccccaacctctgaagctaacacagtctgggctggaacagcagtcacagtcagagccagag
aacgtgtccaggaggatgggaaagcatttaccatcccagcagactgcgcccctgggttat
gctgttgtatcacatgaagctcagcaagttcacatgagccatccacagccattccgcacg
caggcttctttgcagacatcaactgtgcaagtgcaacttggtcatctccagaagataaaa
gctaaccacttgcagcagccaccacaacagcagcagcagccaccggcatcaccaccatca
gatcagaatgagaacacccacaaacaagtcatccagcaaagcctggacataatgcaccac
caatttgagctggaggagatgaaaaaggatctggagcttcttctgcaggcccaaggacag
tccagcttgcagctgaaccaagccaagccacctcagcacgttcaacagaccatagttggt
caaatcaactacatagtgaggcagccagccccagttcagcaacaaatccaagatgaagca
caagtctgtgagagttccactgaacttgatgcccagaagcctgtaattcctcttgacaaa
cgtgatagtccctccctgtcacagtcactagatgaagaagccagtgtcagcagtcactcc
cctgagagcacattgcaacaatcagctttccatccagtgagaaagcattccgcatcctta
agcattgtgggcttttcaaacagtttagaaatggaactaccttccacaaggttgtctagc
tcggccgatctacagacgcaaggtgcagctgctgtaacacttggtccatccccaaacgcc
ctttgtgactgcgatgctccaccagagtcggtccccagctacagcttggcattgggcaga
gctccaagtgacctgagccttgcggctgctgctggcctcacaccaggtgatgcactccag
ggcagcactaagtgcaagctggaaaatgaagacttcaatactgcagatcatcctctagaa
aatagcttggacactgctgggcaagatgcagttaatgaattaactttttctatgcaaaaa
gtgcttgaagagcctattaatctttcgatcaaaaaatctcaacattgcacttctccttct
gaactgctcagcaacaatttcctgcctgtgaatgccagaatgagacagcttggaagcaaa
gcagattccaataactgtgaaaaggaacattttgaaatggatatgaaaagcaatcagaat
gtcagagctggccctagggagcagaagaacccctatgtgagactggaacgtctgaaaata
tgtacatcagaagcaggggagctcccggtgtttaagctccagccacaggacaatgagcag
gaaggaaacttcctcctgataattgaatgtgggacccagtcttcaagtatgtctataaag
ataaataaagatagtccacctgaaggactgaaatccaaagaggagaactcaaaggacaga
aagctgctcatatcccaggctgcaggacagacacaatctcctcctgtgaatactgcatct
gttgatcagaagctcagcaatggcatctccatcatgaaaaaatctccagttactcaggaa
gtcaatcccattgaaaatgaggatttctgtgctgtgtgtcttaatggaggagaactgttg
tgctgtgatcactgccccaaggtcttccatctctcctgccatgttccagccctgctcagc
tttccagtgggagaatgggtgtgcacactttgccgtaatccagtgaagccagaggtagaa
tatgactgtgaaaacacacgctacagccacagctgtaatgtacaatatggccttggtgac
tgtgaccagaagaagtgtgaaaagctggtgctttccctgttctgcagtagtatgagcctc
ccatttcatgaacctgtcagccccctggctcgccactattatcagatcatcaaaaggcca
atggatttgtcaattatacgaaaaaagctgcaaaaaaaggacaagtctcactattctgca
cctgaggaactcgtgactgacgtgcgtctcatgttttggaactgtgcaaagttcaattat
ccagattcagaggttgctgaggctggacgatgcctagatgtattctttgagggcaaactg
aaggagatttatccagacaggtattttccttcaatgcaacaagaagactctgattctgaa
gaagcggagagtcagaatagcaaaatgctaccccaagattttcagtggccgtcatacgga
caggagtgcattcagcctaaaaggagacggcgccatgctgaaagtgaaaaagctaaaaga
atgatgtttcagccagctaacagccttcctcagcctgaagggtgggataggtaa
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