Rissa tridactyla (black-legged kittiwake): 128909312
Help
Entry
128909312 CDS
T09443
Symbol
ATG2B
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04136
Autophagy - other
rtd04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128909312 (ATG2B)
04136 Autophagy - other
128909312 (ATG2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128909312 (ATG2B)
03029 Mitochondrial biogenesis [BR:
rtd03029
]
128909312 (ATG2B)
Membrane trafficking [BR:
rtd04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
128909312 (ATG2B)
Mitochondrial biogenesis [BR:
rtd03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128909312 (ATG2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
128909312
NCBI-ProteinID:
XP_054056786
LinkDB
All DBs
Position
4:complement(56378194..56430948)
Genome browser
AA seq
2094 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLTQVPLDKWCLNEIL
ESADAPLEVTDGFIQSISLSVPWGSLLQDNCALEIKGLEMVFRPRPRLASGSEPMYWSSF
MTSSMQLAKECLSQKLTDEQGEGSQPFEGLEKFAETIETVLRRVKVTFLDTVLRIEHVPE
NSKSGTALEIRIERTMYCDETADECSGINVHQPTAFAHKLLQLSGVSFFWDEFPASAKSS
PVCSATQLATEPKLSPSWNPKIIYEPHPQLTRNLPEITPSDPVQISKLIGRMELSLTLKQ
NEVLPGAKLDVDGQIDSIHLFLSPRQVHLLLDMVAAIAGPESLSRLELSNKDRKNRPMQQ
EDEYRIQMELKRYLRKESLSAGASSEQSFYETESARTPSSREEEVFFSMAEMDMSHSLSS
LPPLGDPPTMDLDLSLTSTYTTTPAGSPLSTTVLQPTWGDFLDRNKQELQPPRGSSLTAN
MVHQTSLRRTSIPSRSVSVDESRPELLFRLAVGTFSVSVLHIDPLPPPESSLNLNPLTPM
ARDFFTRIEKIEPVKFSTEDFLSFREVFAEACSHDHLRFIGTGIKVSYEQRQRTASRSFS
TDLSIGDLEFLECLFSTDSHSIQPHYTELLTFRSEEGNDSRAMPCLQLHYKHSDNRGPQG
SQGRLSSVPQKAELQIKLSPVFCELDISIVDRLNSLLQPQKLTTVEMMASHMYASYNKHI
NLHKAFTEVFLDDSHTPANCRVSVQVNAPALNLSVRFPIPDLRSDQERGPWFKKSLQKEI
LHLEFTDTEFKTEFIGGSTPEQVKLELTFKELTGSFEEDNAEAPIKFFQVSGGIDGDITS
SSDNFDWPRIVLKINPLAVHSILERIAAEEEEGDNNFQEEEEGGSHSLKDVCDIRRPEPS
PFSSRRVMFENEEMVMPGDVVEMTEFQDKTISNSHYVLELMLPNIHLTLPNKSFYEKLYN
RISNDLLLWEPTAPSPVETFENLSYGVGLSVASQLINTFSKDSFSQFKSAVNYDDESGSE
EETLQYYSTVDPNYRSRRRKKLDSQNKNSQSFLSVLLNVTHGLVSIFTDVKQDDGNTVEG
KYGEFWLEFNSGSLFSVTKYEGFEDRHYVCLHSSSLNLYHQGLVDGVVPSSEVRLPSTIR
PHWLEPTICFSEEDGLSRTTSDGVGVDSPSMLTVAVKIQSDKIESNTKEFLVAVGLRGAT
LQHRVLPSGLSWHEQILYFLNISDEPVLGYNPPATITTFHVHLWSCALDYRPLFLPVRSL
LTVETFSISSSVAVDKSSSTLRIILDEAALHLSDKCNTVMVNLHRDYVRVMDMGLLELTI
TAVKSDSDGERTKPRFELHCSSDVIHIRTCSDSCAALMNLIQYIASYGDLHPPAKTEIKR
GVSKPKMKVETFSQPSSHGTVLPESEQQILRDLMSDAMEEIETQQTAAAMKPESNDFSSE
TCFFSTLLQLPGVLDDRSQTQEPSCSDLFLFPDESGNVSQEPSPTYASFTHHLINEAMGD
VPAESDDFCILFAPKVAVAEKEEEPVIKIMVDDAIIIKENHFSQPIKKTDTSKAPLHFPV
PLVRYVVKEISLIWHLYGGRDFGTAPPTSPAKSFISPHSSPSHTPTRHGRTTASGGRGRN
PDFLMEIQLSKVKFQHEVYPPGGAEGESSLLEQPVSRQVFIVQDLEIRDRLATSQMNKFL
YLYCSKEMPRKAHSNMLTVKALHVRPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFF
TSLSTEVELLVTPDPEVKKSPGAEVTCSLPRHVSSLKDPSPVISFSSPKQANENGSIDSV
DVVNGDDHHFSQEVTSYSDQPVFFREFRFTSEVPIRLDYHGKHVSMDQGTLAGILIGLAQ
LNCSELKLKRLCYRHGLLGVDKLFSYAISEWLNDIKKNQLPGILGGVGPMHSLVQLVQGL
KDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSP
GPTFIEAKKIKRFPRHRLAHQPVDLREGVAKAYSVVKEGITDTAQTIYETAAREHENRGV
TGAVGGVLRQIPPTVVKPFIVATEATSNVLGGMRNQIRPDVRQEESQKWRLGED
NT seq
6285 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggcctttctcggagtccatcaagaagagggcctgcaggtacctgctgcagagg
tacctgggccacttcttgcaggagaagctcagcctggagcagctcagcctggatctctac
cagggcaccggctccctgacgcaggtcccgctggataagtggtgtcttaatgagatcctg
gagtctgcagacgcacctctggaagtcacagatggatttatccagtcaatttctttatct
gttccatgggggtcgttgctacaggataactgtgcattagaaataaaaggattagagatg
gtcttcaggccaagaccaaggcttgcatctgggtctgagccaatgtattggtcaagtttt
atgaccagtagtatgcagcttgcaaaagagtgtcttagccaaaaattgacagatgaacaa
ggagaagggtcccagccttttgaaggacttgagaaatttgcagaaactattgaaacagtt
ctaagaagagtgaaagttacctttttagatactgttttgcgaatagaacatgtgccggaa
aactctaaaagtggaactgcacttgaaatcagaatcgaaagaactatgtactgtgatgaa
actgcagatgagtgctctggaataaatgtacatcagcccacagcttttgctcacaagtta
ctgcagctctcaggtgtctccttcttctgggatgagtttcctgcatcagcaaagtcctcc
ccagtgtgttcagctacacagctggcaactgaaccaaagctttcacctagctggaatcca
aaaatcatttatgagccacatccgcaattaacaagaaacttgccagaaattactccttct
gaccctgtacagatcagtaagctgattggtagaatggagttgagcctaacattaaagcaa
aatgaagtacttcctggagctaagttggatgtagatggacaaatagactccatacatcta
tttctgtcaccaaggcaggtgcaccttttattggacatggtagcagctattgctggacca
gagagcctaagcaggctagaattgtcaaataaagataggaaaaaccggcctatgcaacag
gaagatgagtatcggattcagatggagctgaaacgttatttaagaaaagagtctttatct
gcaggagcatcatctgaacaaagcttctatgagacagagagtgccagaacgccttctagt
cgtgaagaagaagttttcttctcaatggccgaaatggacatgtctcacagcctttcctcc
cttccacctcttggagaccctccaactatggatctagacttgtctttaaccagtacatac
acaactacaccagcaggatctccactgagcactacagtgcttcaaccaacttggggtgat
tttcttgatcgtaacaaacaagaactacaacctccaagaggttcttcacttacagccaac
atggttcaccagacttccttaagaaggacatctattccatccagatctgtttctgtggat
gaatccagacctgagcttctttttagactggcagttggaactttctcagtgtctgtactt
catattgaccctttacccccacctgaaagttcactgaaccttaacccattgacaccaatg
gctcgggatttctttacccgaatagaaaagattgagccagttaagttttcaacagaagat
tttctgtccttccgagaagtatttgcagaagcttgttctcatgatcaccttagatttata
ggtaccggcatcaaggtgtcttatgaacaaagacaaaggactgcctctcgaagttttagt
actgatttatccattggggatttggagtttctggaatgccttttttctactgactctcat
tccattcagcctcactatacagagctgctgacatttcgttctgaagaaggaaatgattct
cgtgctatgccatgccttcagcttcattataagcattcagataatagaggacctcagggt
agtcaagggagactgagttctgttccacagaaagcagagttacaaataaagttaagtcca
gtgttttgtgagctggatattagtattgtagaccgattaaattccttacttcagccacag
aaactgactacagtggagatgatggcatctcacatgtatgcttcttataacaagcacata
aatctgcataaagcatttactgaagtttttctggatgattcacatactcctgcaaactgt
agagtttcagttcaagtcaatgctccagcattaaatctctccgttcgcttcccaatacct
gacttacggtcagatcaggaaagaggaccatggtttaagaaatcgcttcagaaggagatt
cttcatcttgaatttacagatacggaatttaaaactgagtttataggaggatcaactcca
gaacaagttaaattagaacttacctttaaagagctaactggttcgtttgaagaagataat
gcagaagcaccaataaaattttttcaagtgtctggtggcatagatggagatataacatcg
tcatcagacaattttgactggcctcggattgtattgaaaataaaccctttggctgtgcac
tctattctggaaaggatagcagctgaggaggaagaaggtgataataactttcaagaggaa
gaagaaggagggtctcattctttgaaggatgtctgtgatattagaagaccagagccttct
cctttttcttctcgtagggttatgtttgaaaacgaagagatggtgatgccaggagatgtg
gttgaaatgactgagtttcaggataaaacaattagcaattctcattatgtactggaactc
atgttaccaaacattcacttaacattaccaaacaaaagcttttatgaaaaactttacaat
aggatcagcaatgatttattgttgtgggaacccactgctccatctcctgtagaaacattt
gaaaacctttcttacggtgttggactatctgtggccagccagctcatcaacactttcagt
aaagacagctttagtcaatttaaatctgcagttaattatgatgatgagagtggatctgag
gaagaaacactgcagtattattccactgttgatccgaactatcgttcacgcagaaggaaa
aagcttgactctcagaataagaactcgcaaagctttctgtctgttctgctaaatgtgaca
catggattagtgtcaatattcacagatgtaaagcaggatgatggtaatacagtggaagga
aaatacggtgaattctggttggagttcaacagcggttcacttttcagcgtgactaaatat
gaaggctttgaggacagacactatgtttgtctccattctagcagcctcaatttatatcat
caaggcttggtagatggggtcgtcccttcctctgaagtgcgactgcccagcacaatacgt
ccccattggttggaacctactatttgtttttctgaagaagatggtcttagtaggacaact
tcagatggtgtaggagtggattctccaagcatgctgaccgtcgcagtcaaaatccaatca
gataaaatagagagcaatacaaaggaatttctagttgctgttggactaagaggagccacc
cttcagcacagggtactgccttcgggtttaagctggcatgaacagattttatattttttg
aatatttctgatgagcctgttctgggatataatcctccagctacaattacaacttttcat
gtacatctgtggagttgtgctcttgattacaggcccttgtttttgccagtcagatctcta
cttactgttgaaactttcagcatttccagcagtgttgcagtagataaatcctcttctact
ctcaggatcattttagatgaagctgctttgcatctgtctgacaagtgcaacactgttatg
gtgaacctccacagagattatgttcgtgttatggatatggggctgctggagctaaccatt
acagcagtaaaatctgattctgatggggaaagaactaaaccacgttttgagctgcactgt
tccagtgatgtaattcatattcgtacctgctctgattcatgtgctgcactaatgaatctt
atacaatatattgcaagttatggtgatttacatccacctgctaagacagagattaaacgt
ggagttagcaagccaaaaatgaaggtagagacctttagccaaccatcttcccacggaaca
gtcctccctgaatcagaacaacagattttacgggatttgatgagtgatgcaatggaggaa
attgagactcaacagacagctgctgccatgaagccagagtccaatgatttttccagtgaa
acatgttttttctccaccctccttcaactcccaggagttttggatgacagatctcaaact
caggagccatcttgctcagatctcttcctgtttccagacgaaagcggaaatgtctcacaa
gagccaagtcccacttatgcttcattcactcatcacctgataaatgaggccatgggagat
gttcctgcagaaagcgatgatttctgtattctttttgcacccaaagttgctgtggctgaa
aaagaggaagaaccagtaataaaaataatggttgatgatgcgattatcataaaggaaaat
catttcagccaacctattaaaaaaacggacacaagcaaagctccccttcattttcctgtt
cctctggtacgctatgttgtaaaggaaatctctcttatttggcatctttatggtggaagg
gattttgggactgcaccaccaacatctccagctaaaagtttcataagtccccatagttct
ccatctcatacaccaacgagacatgggcggactacagcaagtgggggaagaggaagaaac
ccagacttcctaatggaaatacagttaagcaaggtgaaattccagcatgaggtataccct
ccaggtggtgcagaaggtgaatccagtctgttggagcagccagtgtcacggcaggttttt
attgttcaagacctggagattagagatcgtttagcaacatcacagatgaataaatttctc
tatctctactgcagtaaggagatgcccagaaaagcgcattcaaatatgttaacagttaaa
gcattacatgtccgtccagagtctggtagatccccgcaggaatgttgtttacgtgtttca
ctaatgccgcttcgcctcaatattgaccaggatgccttgtttttcctgaaggattttttc
actagcctctctacagaagtagaactcttagttactccagatcctgaagtgaaaaagtct
cctggtgctgaagttacgtgtagtttgcccaggcatgtcagcagccttaaggacccaagt
ccagtcatttctttctcgtcacccaagcaagcgaatgaaaatggtagcattgattctgtg
gatgttgttaatggagatgatcatcatttctcacaagaagtaacatcatacagtgatcag
ccagtatttttcagagaatttcgttttacatcagaagttccaatacggcttgattaccat
ggcaaacacgtatcaatggatcaggggacacttgctgggattctcattgggcttgctcag
ttaaactgctcagaattaaagctgaagagactttgttacagacatggtttattaggtgtg
gataagttgttctcctatgccatcagcgaatggcttaatgatataaagaaaaaccagcta
ccaggaattttgggaggagtaggccctatgcattctctagtgcagttagtccaaggtctg
aaagacttggtgtggttaccaatagagcagtaccgaaaggatggccgtattgtaagaggc
tttcaaagaggagcggcttcttttggtacttccactgcaatggcagcactggagctgaca
aacaggatggttcagactatacaggcagctgcagaaactgcatatgacatggtatcacca
gggcctacttttatcgaagcaaaaaagatcaaacgattccctcgccatcgtttagctcat
cagccagtagacctacgggaaggtgtagccaaagcatacagtgtagtaaaagaggggatc
acggacacagcccaaaccatctatgagactgctgctcgtgagcatgaaaacagaggagta
actggagcagtaggaggagtcctccgccagattccaccgactgtggtgaaacctttcatt
gttgcgacagaagcaacctcaaatgttctcggtggaatgagaaaccagatcaggccagac
gtgcgtcaagaagagtctcagaagtggcgccttggggaggattga
DBGET
integrated database retrieval system
