Rissa tridactyla (black-legged kittiwake): 128909362
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Entry
128909362 CDS
T09443
Symbol
NUP93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128909362 (NUP93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128909362 (NUP93)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128909362 (NUP93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
128909362
NCBI-ProteinID:
XP_054056919
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Position
4:complement(73795432..73877141)
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AA seq
819 aa
AA seq
DB search
MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKA
SVILGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKR
TFAMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQENEPSYAGELGPPGRSSLDS
VEMAYARQIYIYNEKIVNGHLQPNLVDLCAAVTELDDKNISEFWTMVKQMTDVTLVPASD
TLKVRTNMEVRMEFVRQALRYLEQSYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSFLNIK
LPAPVPGLQDGEVEGHPVWALIYYCMRCGDLAAAMHVVKRAQHQLGEFKTWFQEYMHSKD
KRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQ
VCFDDNGASSPQDRLTLSQFQKQLLEDYGESHFAVNQQPLLYFQVLFLTAQFEAAIAFLF
RTERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEAGDPPGIRRLNFVRLLMLYTRKFE
STDPREALQYFYFLRNEKDSQGENMFLRCVSELAIESREFDMILGKLENDGSRKPGVIDK
FTSDTKPIINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPIVPQISTPQSNK
ERLKNMAHSIAERYKAQGISAKKSIDSTFYLLLDLITFFDEYHAGHIDRAFDIIERLKLV
PLSQDCVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQYKRMKGTSPATPARPQRVMED
RDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggatactgaaggctttggagaacttctccagcaggcagaacagcttgcagctgagaca
gaaggtatctctgagctccctcatgtagaacgcaatctgcaggagatccagcaggctggg
gagcgcctgcgttcccgcactctgacccgcacttcccaggagactgcagatgttaaggcg
tctgtgattctcgggtctagagggcttgatatatctcacatttctcagcgactagagagt
ctaagtgcagccactacatttgagcctctcgaaccggtgaaggacactgacatccaggga
ttcctgaagaatgaaaaagataatgcattgctgtcagctattgaagagtctaggaagagg
acttttgctatggctgaggagtatcaccgagaatcgatgctggttgaatgggaacaggtg
aaacaaaggattcttcatactctgcttgcatcaggggaagatgctcttgatttcacccag
gaaaatgagcccagctacgctggggagttgggtcctccaggtcgcagctctttggacagc
gtggagatggcatacgctcgtcagatttatatttataatgagaagatagtgaatggacat
ctgcagcctaacctggtggacctttgcgctgctgttacagaactggatgataagaacatc
tctgagttttggaccatggtgaaacaaatgaccgatgttaccctggttcctgctagcgat
accttgaaggtacggaccaacatggaggtgcgcatggagttcgtgaggcaggctctgcgc
tacctagaacaaagttacaaaaattacacatttgtgacagtctttggaaacttgcaccag
gctcagctgggtggagtcccagggacctaccaactagtccgcagcttcttgaacatcaaa
ctcccggcgcctgtccctggtctccaggatggtgaggtggaaggccatcctgtctgggca
ctgatttactactgcatgcgctgcggagatttggctgcggccatgcatgtggtgaaacgg
gcacagcaccagctgggagagtttaaaacctggttccaggagtacatgcacagtaaagat
aaaagactatctcctgccacagaaaataaactgcgtcttcattacagacgagctctgaga
aataatactgacccctacaaaagggctgtttactgtattattggccgttgtgacattaca
gataaccagagtgaagtcgctgataaaacagaagattatctttggctaaaactgaaccaa
gtgtgttttgatgacaatggtgcaagttctccgcaagaccgactaacattatcccagttc
cagaagcagttgctggaagactatggtgaatcccattttgcagtaaaccagcagccattg
ctctacttccaagtattgttcttgacagcacagtttgaagccgcaattgcttttctcttc
cggacagagcgcttgcgttgtcatgctgttcacgttgcgttggtcctgtttgagttaaaa
ttgctcctgaaatcttctgggcagagtgcgcagctattaagccatgaagctggtgaccct
cctggcatcaggcgtctaaattttgtgcggcttttgatgctttacacccgcaagtttgaa
tcgacggatccaagggaagccctgcagtatttttactttctcaggaatgagaaggacagc
caaggagagaatatgttcttgcgttgcgttagtgaactagcaattgaaagcagagagttt
gatatgattcttggaaagctggaaaacgatggtagtaggaagcctggagtgatagacaag
tttacaagtgacacaaaacccattattaacaaagtggcttctgcagcagaaaacaaagga
ttgtttgaagaagctgcaaaactctatgatcttgcaaagaaccctgacaaagttttagaa
ctgatgaacaagctcctcagtcccattgttccccagatcagcactccccagtcgaacaaa
gagcggctgaagaacatggcccattccattgccgagaggtacaaagctcaggggataagt
gcaaagaaatccattgactccacgttctaccttctgctggacttaatcacgttttttgat
gagtatcacgccggtcacattgacagggcctttgatatcattgaacgcctaaagcttgta
cctcttagccaagactgcgtggaggagagggttgctgccttccggaatttcagcgatgag
atcaggcacaatttatcagaggtcctgcttgcaaccatgaatattttattcacccagtat
aagaggatgaaaggcaccagcccagccactcctgccagaccccagcgggtaatggaagac
agagattcgcaacttcgatctcaagctcgtgcactgataacatttgcggggatgatccct
tacagaacatcgggagacaccaacgcaagactggtgcaaatggaggtccttatgaattag
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