Rissa tridactyla (black-legged kittiwake): 128909473
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Entry
128909473 CDS
T09443
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
128909473 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128909473 (RAG1)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128909473 (RAG1)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128909473 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
128909473
NCBI-ProteinID:
XP_054057167
LinkDB
All DBs
Position
4:complement(51644981..51648091)
Genome browser
AA seq
1036 aa
AA seq
DB search
MSVAPQMDLPEEIQHPYTKFSEWKFKLFKVRSFEKTPSDNSQQINKDQAEEFTSSNKEIV
LDKDEAVPRQEKMDLMGNREALEKDVNDVKTQDNKAHQHNLKQLCRICGVSFKTDCYKRT
HPVHGPVDDETLWLLRKKEKKATSWPDLISKVFKIDVRGDVDTIHPTRFCHNCWSIIHRK
FSNTPCEVYFPRNSTMEWQPHSPNCDVCHTTSRGVKRKSQPPSVQHGKRVKTIAERARIN
RGVKNQAQINNKNLMKEIVNCKNIHLSTKLLAVDYPVDFIKSISCQICEHILADPVETTC
RHLFCRTCILKCIKVMGSYCPSCWYPCFPTDLVTPVKSFLSILDSLGIRCPVKECDEEIL
YGKYGQHLSSHKEMKDRELYSHINKGGRPRQHLLSLTRRAQKHRLRELKRQVKAFAEKEE
GGDIKAVCMTLFLLALRAKNEHRQADELEAIMQGRGSGLHPAVCLAIRVNTFLSCSQYHK
MYRTVKAVTGRQIFQPLHALRTAEKALLPGYHPFEWKPPLKNVSTNTEVGIIDGLSGLTL
SIDDYPVDTIAKRFRYDAALVCALKDMEEEILEGLKAKNLDDYLNGPFTVVVKESCDGMG
DVSEKHGSGPAVPEKAVRFSFTVMNIAIACGNESKRIFEEVKPNSELCCKPLCLMLADES
DHETLTAILSPLIAERESMKNSELLLEMGGILRTFKFIFRGTGYDEKLVREVEGLEASGS
TYICTLCDATRLEASQNLVFHSITRSHAENLERYEIWRSNPYHESVDELRDRVKGVSAKP
FIETVPSIDALHCDIGNATEFYRIFQMEIGEVYKNPDVSKEERKRWQLTLDKHLRKKMNL
KPMMRMSGNFARKLMSKETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSSCPAKECP
ELLCQYSYNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEGNES
GNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSQGFTIDPEDSLG
DSLPLEVLESNDSVQL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtagcaccacaaatggacctgcctgaagaaattcagcatccgtacacaaaattt
tctgaatggaaattcaagctgtttaaagtaagatcatttgaaaaaacaccttctgataac
agccagcagataaacaaagatcaggcagaagaattcacttcttcaaacaaagaaatcgta
ctggataaagatgaagcagtaccaagacaagaaaagatggacttaatgggcaacagggag
gcacttgagaaagatgtcaatgacgtgaaaacacaagacaataaagctcatcagcacaat
ctgaagcaactttgccgcatctgtggagtttcatttaaaactgattgttacaaaagaact
catccagtgcatgggccagtggatgatgaaactttgtggcttctgagaaagaaagagaaa
aaagcaacctcttggccagatcttatctctaaggtttttaagattgatgtgcgaggggat
gttgatactatccatcccactcgattttgtcacaactgctggagtattatccacagaaaa
ttcagtaatactccatgtgaagtgtattttcctcggaacagcacgatggagtggcaaccc
cactccccaaactgtgatgtgtgccacactaccagtcggggagtcaagagaaaaagccag
ccacccagtgtacaacatggcaaacgtgtgaagaccattgcagaacgtgctcgaataaac
agaggtgtaaagaaccaagcacagataaacaacaaaaatttaatgaaagagattgtcaat
tgcaagaatatacatctcagcactaagctgcttgcagttgattacccagtagatttcatt
aaatccatctcttgccagatctgtgagcatattttggcagatccagtggaaacaacatgc
agacacttgttttgcagaacttgcatccttaaatgtatcaaagttatgggcagctattgc
ccctcctgctggtatccttgcttccctactgatctggtaaccccagtgaaatccttcctg
agcatccttgatagcctgggtataagatgccctgtaaaggaatgtgatgaagagatctta
tatggaaaatatggccaacacctctccagccacaaagaaatgaaagacagagagctctac
agccacataaataaaggtggccgaccaaggcagcatctcctgtctttgaccaggagagct
cagaaacatcgtctgagagaactgaaacgtcaagtcaaggcttttgctgagaaagaagag
ggcggtgatataaaggctgtatgcatgactttgttcctgctagctttaagagcaaaaaat
gaacacagacaagcagatgaattggaggcgataatgcaagggaggggatctggacttcac
cctgctgtctgcctggcaatccgagtcaacacatttctcagctgtagccaatatcataaa
atgtatagaacagtaaaagctgtcactgggaggcagatcttccagcctttgcatgctctt
cgcactgctgagaaagccctcctaccaggttatcatccctttgagtggaaacctcccttg
aaaaatgtatccactaacacagaagtggggattatagatggactatcaggattgacactc
tcaattgatgactacccagtagacacaattgcaaagagatttcgatatgatgcagccttg
gtttgtgccctaaaggacatggaggaggagatcttggaaggcctgaaagcaaaaaacctg
gatgactatttgaatggtcccttcactgtggtagtaaaagagtcctgtgatggaatggga
gatgtcagcgagaagcatggaagtgggcctgctgtcccagagaaggctgttcgcttttct
ttcacagtcatgaacattgctatagcatgtgggaatgaaagcaagaggatctttgaagaa
gtaaagcccaattcagagttgtgttgcaagcccttgtgccttatgctcgctgacgaatcg
gatcatgaaactctgacagcaatcctgagccccctcatagcagaaagagagtctatgaaa
aacagtgaactgctacttgaaatgggaggcatcctgagaacgttcaaattcatctttagg
ggtacaggatatgatgagaaactcgtgcgagaagtggaagggctggaggcctcaggttcc
acctacatttgcaccctgtgtgacgcaacccgcctggaggcatcccagaatttggtcttc
cactccataaccaggagccatgctgaaaatctggagcgctatgaaatatggaggtccaac
ccatatcatgaatctgttgatgagctccgtgacagagtgaagggtgtttcagctaaacct
tttattgagactgttccctccatagatgcgttgcattgtgacattggcaatgcaacagaa
ttctacaggatcttccagatggagatcggtgaagtttacaagaatcctgacgtctctaaa
gaggagaggaagaggtggcagttaactcttgacaaacacctcagaaagaagatgaacttg
aagcctatgatgaggatgagtggaaattttgctagaaagctcatgtccaaagagacagta
gaggcagtatgtgaattaataaagtgtgaggaaaggcatgaggccctaaaagaattaatg
gacctttatctgaagatgaagccagtgtggcgatcttcatgccctgccaaggagtgtcca
gaattgctgtgccagtatagctacaattcacagcgttttgctgagcttctatctacaaag
ttcaagtacagatatgaaggcaagattacaaattatttccacaaaacccttgctcacgtt
cctgaaatcattgaaagagacggttccattggggcctgggcaagtgaaggaaatgagtct
ggaaacaaactgtttaggaggttcagaaaaatgaatgccagacagtccaaatgctatgag
atggaggatgtcttgaagcatcactggctgtacacctctaagtacctccagaagttcatg
aatgctcataaaacattaaaaagccagggcttcaccattgatccagaggatagtttaggt
gactcgttgccattggaggtcttggaaagcaatgattcagtgcaactctaa
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