Rissa tridactyla (black-legged kittiwake): 128909687
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Entry
128909687 CDS
T09443
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04136
Autophagy - other
rtd04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128909687 (ATG13)
04136 Autophagy - other
128909687 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128909687 (ATG13)
03029 Mitochondrial biogenesis [BR:
rtd03029
]
128909687 (ATG13)
Membrane trafficking [BR:
rtd04131
]
Autophagy
Autophagosome formation proteins
ULK complex
128909687 (ATG13)
Atg1 complex
128909687 (ATG13)
Mitochondrial biogenesis [BR:
rtd03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128909687 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
128909687
NCBI-ProteinID:
XP_054057674
LinkDB
All DBs
Position
4:46702691..46727366
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AA seq
549 aa
AA seq
DB search
MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRAGEDNGAV
YPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPPPVVTDTLKVPVMGLAFSHQLSSSR
LSYQPAALGVGSADMGYPVLFAGGLNAAHPHQLIGPGKEGGVPPIPSQPAHGTQADQERM
CTPLDGVHYSAATPSSSEDTETVSNSSEGKCGSPHDLLETIFIRKVGAFVNKPINQVTMA
NLDIPFAMFAPKNVELEDNDPMVNPPDSPETESPLQGSLHSEGSSGSSTGNTHDDFVMID
FKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVKE
FDAFVETLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagttcccaggacaggaaggacctggacaagttcatcaaatttttt
gctttaaagacggtacaagtaattgtccaggcccgacttggagagaaaatctgtacccga
tcatcatcctccccaacaggctctgactggttcaatttggcaatcaaagatataccagag
gttactcatgaagcaaagaaagccctggcaggacagctacctgctgtcggacggtctatg
tgtgtggagatctctctcaaaacctcagagggggactccatggagctggaaatttggtgt
ctagaaatgaatgaaaagtgcgacaaagaaatcaaagtttcatacaccgtatacaacagg
ctgtctctactgctgaagtctttgcttgctataaccagggtaactccagcctacagactc
tcaaggaaacaaggccatgaatatgtaatattgtacaggatatattttggtgaagtgcaa
ctgagtggcttgggagaaggtttccagacagtccgtgttgggacagtgggtaccccagtg
ggcaccatcactttgtcttgtgcctacagaatcaaccttgctttcatgtcaaccaggcag
tttgagaggacccctcctatcatggggattatcattgatcactttgtggaccgtccctat
cccagctcttcgcccatgcatccctgcaattacagagctggtgaggacaatggtgcagta
tacccctcagtagaagattcccaagaagtgtgtaccacgtctttttccacctctcctcca
tctcagtgtgtttttactgtcacaaaggcacactttcagacccctcctcctgtggtgacg
gacaccttgaaggtcccagtgatgggactggccttttcacatcaactttccagctctcgt
ctttcctatcagcctgctgccctgggagttggatcagctgacatggggtatcctgtactc
tttgctggtggcttgaatgctgcacaccctcaccagttgatcggtccaggcaaagagggg
ggagttcccccgattcctagccagccagcacatggcactcaagctgaccaagaaaggatg
tgcacgccactggatggagtccactactcagcagctactccttctagtagtgaggacaca
gaaacagtatcaaacagcagcgaagggaagtgtggctccccacatgaccttttagagacc
atctttatccggaaggtgggagcttttgtcaacaaacccattaaccaggtgaccatggcc
aacttagacattccttttgccatgtttgctcccaagaatgttgagctggaagataacgac
cccatggtgaatcctcctgactccccagaaactgaatctcctctacaaggcagcttacac
tcggagggctccagtggcagcagcacagggaacacccacgatgactttgttatgattgac
tttaaaccagcgttttcaaaagatgacattcttccaatggacctggggacattttaccgt
gagtttcagaacccccctcaactcagcagcctctccattgacattggagcacagtccatg
gcagaggatttggactcattaccagagaagctggcagtccatgagaaaaatgtcaaagag
tttgatgcctttgtagaaaccttgcagtga
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