Rissa tridactyla (black-legged kittiwake): 128909744
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Entry
128909744 CDS
T09443
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128909744 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128909744 (DCP1B)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128909744 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
128909744 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
128909744
NCBI-ProteinID:
XP_054057798
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All DBs
Position
1:151652939..151699422
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AA seq
610 aa
AA seq
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MAAAVAGAGAGAALLGKGLDISLAALQQHDPYISSIVDVASQVALYTFGHRANEWEKTDV
EGTLFVYTRSASPRHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFY
DKEECQRIAELMKNLTQQEQFKAQQGTGTGVSPMIMNSANNKEVDILRMLTKAKDEYTKC
KTCSEPKQITSSSAIYNNPNLIKPIPVKPSENQRISQQSKNVDPEPQHLSLTALFGKQEK
PDVSEPPLNKQHQENLPVRQGVVRSLSYEEPSRHSPSAEKQLCPAIQKLMVRGTDLHPLA
EFPENRLCENGNIHPVGETFTGLFQPVTSHGITTSHVVQDTAGTQSLLQKLQSQSGSVTK
MDPSATASVNSTASVFSRTPAAVGVPAATVNSMSQPPLVYFNGSLPGQTLESQTLGKEQS
KLPRQPLSLSGNQAANSGVISPQELLKKLQIVQQEQQLHVSSRPTLAAKFPVVTQNTNTL
KPLDSWIEKAPGTEKQSALFQVISPQRIPATVTPTLLMSPMLFTQTTPAPPKANESGRLA
AASQEPAAGSASLLLPLQTPEPSGVNSSSITKMQLQETLLHLIQNDDNFLNIIYEAYLFS
VRKAAMKKSM
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggtggccggggccggggccggggccgccctgctgggcaaggggctggac
atcagcctggcggcgctgcagcagcacgacccctacatcagcagcatcgtggacgtggcc
agccaggtggcgctctacaccttcgggcaccgcgccaacgagtgggagaagaccgatgtg
gagggaacactgtttgtttacacaagatcggcttctccaaggcatggcttcacaattatg
aacagactgagcatggaaaatcgaacagaacctattactaaagaccttgatttccagctg
caggacccttttctactgtacaggaatgccagattgtccatatatgggatttggttttat
gataaggaagaatgccaaagaattgcagagctcatgaaaaacctaactcagcaggaacaa
ttcaaagcacagcagggcacaggaacaggagtgtccccaatgatcatgaattctgctaat
aacaaagaagtggatatcttacggatgcttaccaaggccaaagacgagtataccaagtgt
aagacgtgctcagagccaaaacaaataaccagttcctctgcaatctataacaaccccaac
ctaatcaaaccaattccagtgaagcctagtgaaaatcaacgaatatctcagcaaagcaag
aacgtggatcctgaacctcagcacttgtccttgacagcactgtttggaaaacaagaaaag
ccagatgtctcagaaccaccacttaataaacagcatcaagagaatcttcctgtcaggcag
ggtgtggtacgttcactgtcctacgaagaacctagcaggcattcgccctctgcagagaag
cagctttgccctgctattcagaagttgatggtgcgtgggacagaccttcatccccttgct
gagtttcctgagaaccggctctgtgaaaatggcaatatccaccctgtgggtgagactttc
acaggactcttccaacctgtgacttctcatggtatcacaacatctcatgtagttcaggat
actgctggcactcagagcttattacagaaattacagagtcagtcgggatcggtgactaaa
atggaccccagtgcaacagcatctgtgaactcgacagcttctgtgttcagcaggactcct
gctgctgttggagtgccagcagcaacagtaaatagtatgagccaaccacctttggtatat
ttcaatggttccttaccaggccagactttggagtctcagacgcttggtaaagaacaatcc
aaacttcctagacagccactttctctctctggcaatcaagcagccaattctggggtgatt
tcacctcaggagttactgaaaaaactccagatagtgcaacaagaacaacagttgcatgta
tccagcagaccaaccttggcagctaagtttccagttgttactcagaataccaatacactg
aaaccactggattcctggatagaaaaggcaccgggtacagaaaaacagagcgctctcttt
caggtaatctcacctcaacgcattcctgccactgtgactcctaccttgttgatgtcccca
atgcttttcactcagaccacacctgctccaccaaaagcaaatgaaagcgggcggttagct
gcagcaagccaagaacctgccgctggctcagctagccttctcctgccactgcaaacccca
gagccatctggggtcaacagcagctcaataactaagatgcagctgcaggaaacacttcta
cacttgatccagaatgatgacaacttcttaaatattatttatgaagcatatctcttcagt
gtgagaaaggcggcaatgaaaaagtctatgtga
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