Rissa tridactyla (black-legged kittiwake): 128909773
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Entry
128909773 CDS
T09443
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128909773 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtd04990
]
128909773 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
rtd04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
128909773 (PDLIM5)
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GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
Motif
Other DBs
NCBI-GeneID:
128909773
NCBI-ProteinID:
XP_054057898
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Position
5:52461813..52590425
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AA seq
878 aa
AA seq
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MSNYSVSLVGPAPWGFRLQGGKDFNMPLAISRLNDGGKAARAHVGIGDVVLTIDGISTDG
MTHLEAQNKIKACTGNLNMTLQRVASVQKPDLIHVPKGEPTEVVKPVPIASAVAPKVTAT
ASVAYNKTPRPFGAVTTSKVTSIPSPSSAFTPAQVAAAAPAPFAAPGLHVNAKPNAEQRS
PVPSAAKPAVNVPRQPAAHNAAPSDGAQDVAEGPRRGFRENQGESKQQNGKNPPKRPPRK
HIVDTYTEFYHTPTHSDASKKRLIEDTEDWHPRTGTTQSRSFRILAQITGTDHMKEPEHE
PAKKTKKSQTENGDFSIPADLPNGAGAQDSCINLNKNSIAAQTLEMPPVPELPSTPLPPM
SENGARPESVAALLPIAETSPGSVPSPSLSEHIVAATPGRKITAELPAPEAASLLTADKS
PPLPATCAVATQTPEPLLPTATAGWPPCAAPPVETALGLPPTPARHDASLPTYGTQSFSK
ISSCQTKSSVSHTSFFARKVLLESPLGSLTKLGPAPVPVLSPFKQRSKIKSMAAAAVSAA
IAVRARLSDPSVYRSLLDALLITPVTKPPLEAIGPSRKSTSALELQRSKSDSLEATQPAA
FTAAAARSMPARQENADVRPAPTSATSAAALKPTGPPGAAKYSGWQPANQAAPASGWTSN
SVKPPGTTAPSEKFATPPQLNEQDTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKS
WHPEEFNCAHCKTSMAYIGFVEEKGALYCEVCYEKFFAPECSKCQRKILGEVINALKQTW
HVSCFVCVACHNPIRNNVFHLEDGDPYCETDYYALFGTMCHGCEFPIEAGDRFLEALGHT
WHDTCFVCSVCSDSLEGQTFFSKKDKPLCKKHAHSINI
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagcgtgtctttggtgggcccagctccttggggtttcagacttcaaggg
ggcaaggatttcaacatgcctctggctatctctcggcttaatgatggtggcaaggcagcc
cgagcacatgtgggaattggtgatgtggttctcaccattgatgggataagtacggatggg
atgactcatctagaagcacaaaacaagatcaaggcatgtacaggcaatttgaacatgact
ctgcaaagagtggcttctgtacaaaaacctgatcttattcatgtaccaaagggagaacct
acagaagtagttaagcctgtgcccattgcctctgctgttgcacccaaagtcactgccacg
gcgagcgtggcttacaataagacaccgaggccgtttggagccgtaaccacctccaaagtc
acctccatcccatcaccatcgtccgccttcaccccggctcaggtggcggctgccgccccg
gccccgtttgctgctcccggactgcatgttaatgccaaacctaacgctgagcagcggtca
cccgtgccgagcgctgctaaacctgcagttaatgtcccacggcagcccgccgcccacaat
gccgccccgagcgacggcgcccaggatgtagctgaggggccgcgacgaggattcagagaa
aaccagggggagagtaaacagcaaaatgggaaaaacccacctaaacgccccccgcggaag
cacatcgtggatacctatacggagttttaccacacacccacccacagcgatgccagcaag
aagcgactgattgaagacaccgaagactggcatccccggacaggcaccacccagtcccgc
tcgttccgcatccttgctcaaatcaccggcactgatcatatgaaagaaccagaacatgaa
cctgcaaagaagactaagaaaagccaaacagaaaatggagacttcagcatacctgcagat
ctacccaatggagcaggagcccaggatagctgtattaatctgaataaaaactccatagct
gcccagactttggagatgccacctgtaccagaacttccatctacacctttaccacctatg
agtgaaaatggtgctagacctgaatctgtagccgctcttttgccgatagcagagacctcc
cctggcagtgtcccctctcccagcctttctgaacacattgtcgcagcaactcctgggagg
aaaataactgcagaattgcctgctccagaggcagcaagcttattgacagctgataaatcg
cctcctctccctgcgacgtgtgctgtggccacgcagacccctgagcctctcctgcccact
gccacggccgggtggccaccttgtgcagccccaccggtggaaacagcccttgggctgcct
cccactcctgccaggcatgatgcatctctgcctacttatggaacacagtctttcagtaaa
atctcaagctgtcagactaaatcatccgtaagtcatacaagcttctttgctagaaaagta
ctgctggaaagtcctttgggaagtctgacgaagttaggacctgctcctgttcccgttctt
tctcctttcaagcagagatcaaaaattaagagcatggctgctgctgccgtgtctgctgcc
attgctgtccgggccagactctccgaccctagtgtctaccgctcgctcttggatgccctg
ctcatcacgcctgtcactaagcctcctctggaggccattgggccctccaggaagtccaca
agtgctctggagttgcagaggagcaagagtgattccctggaggctacccagcccgccgct
tttacggccgccgcagcgaggagcatgcccgcccgccaagaaaacgctgacgtgagaccc
gctcccaccagtgccacatctgctgcagccctcaagccgacgggacccccgggggctgcc
aagtactcaggctggcagcccgcaaaccaagcagctcctgccagtggatggacatcaaac
agtgttaaaccacctggaacaactgccccgagtgaaaaatttgcaacaccacctcagtta
aatgagcaagacacattggttcagagggcagagcatattcccgcgggaaagcgtactcct
atgtgtgcgcactgtaatcaagtcattagaggacccttcttggtggctttggggaagtcg
tggcatccagaggagtttaattgtgctcattgcaaaacctccatggcttacattggattt
gtggaagagaaaggggccctgtattgcgaggtttgctatgagaagttcttcgcccctgag
tgttcaaagtgccaaaggaagatactaggggaagtaataaatgctttgaaacaaacttgg
catgtttcctgctttgtgtgtgtggcctgtcataaccccatccgcaataatgtcttccac
ttagaagacggcgatccctactgtgagacggattactatgccctcttcggtactatgtgc
catggctgtgaattccccattgaagctggagacaggtttcttgaagccctgggccacact
tggcatgacacttgctttgtatgctcagtatgtagtgacagtttggagggtcagactttc
ttctccaagaaggacaagccactgtgcaagaaacacgctcactctatcaacatctga
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