Rissa tridactyla (black-legged kittiwake): 128909792
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Entry
128909792 CDS
T09443
Symbol
DHX15
Name
(RefSeq) ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128909792 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtd03041
]
128909792 (DHX15)
03009 Ribosome biogenesis [BR:
rtd03009
]
128909792 (DHX15)
Enzymes [BR:
rtd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128909792 (DHX15)
Spliceosome [BR:
rtd03041
]
Complex A
U2 snRNP components
U2 related factors
128909792 (DHX15)
Complex B
128909792 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
128909792 (DHX15)
Ribosome biogenesis [BR:
rtd03009
]
Eukaryotic type
90S particles
Helicases
128909792 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
Flavi_DEAD
AAA_25
AAA_29
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
128909792
NCBI-ProteinID:
XP_054057966
LinkDB
All DBs
Position
5:21746934..21794442
Genome browser
AA seq
765 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSTDGKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLR
ATSNSTYYAAAGLPTIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDIL
IRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYS
TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNV
YHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR
KALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
TDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgtctagatctgggggacgattacagctctagcaagaaacgcagc
accgacgggaaagatcgtgaccgggacagggaccgtgatgaccgttctaaagatcgtgac
agagatcgtgacagagatagagatcgtgacagagaaagggacaaggaaaaagatttgcga
gctacatctaactctacgtattacgcggctgctgggttaccaactataaagccagcaatg
attccacacagtattaaccctttcacaaatctaccacatacaccacgatattatgacatc
ctgaaaaaaaggctacaacttcctgtctgggaatataaagaaagatttacggatattttg
attaggcatcagtcgtttgtgctggtcggagagactgggtctggtaagacaacacagatc
cctcagtggtgtgttgactacatgcgctcattacctggaccaaagaggggagtagcatgt
acccagcctaggagagtagccgcaatgagtgtggcacagcgggttgctgatgagatggat
gtcatgctgggccaggaggttggttactctattcgatttgaagactgcagtagtgcaaaa
accattttgaagtatatgactgatggtatgttacttcgtgaagcaatgaatgatcctttg
ctggagcgctatggtgttataattcttgatgaggcccatgagagaacactggctactgat
attttgatgggagttttgaaggaagttgtaaggcaaagatctgatttgaaggttatagtt
atgagtgctactttagatgctggcaagtttcagatctattttgataactgtcctcttcta
actatcccgggtcgcacccatccagtggagatattctatactccagaaccagaaagggac
taccttgaggctgctattcgaacagtgatccaaattcacatgtgtgaagaagaggaagga
gatctcttactctttcttactggacaggaggagattgatgaagcctgcaagaggataaag
cgtgaaattgatgatttaggccctgaagttggtgacatcaaaatcattccattgtattcc
actcttcctccgcagcaacagcaaaggatttttgaacctcccccacctaaaaaacaaaat
ggagcaataggaagaaaggtggttgtgtccaccaatattgctgagacatcattaacaata
gatggtgttgtgtttgtgattgatcctggctttgcaaaacagaaggtatacaatcctcgt
atcagagtggagtctctcttggtgactgcgattagtaaagcttccgctcaacagcgagct
ggccgagctggtcgtactagaccaggcaagtgcttcaggctttatacggagaaggcttac
aaaactgaaatgcaggacaacacataccctgaaattttgaggtctaacttaggatctgta
gtattgcagctcaagaagcttggtatagatgatttggtgcactttgattttatggatcct
ccagctcctgaaactctgatgagagccttagagcttttgaattatctggctgctttaaat
gatgatggagacttgactgagttgggatccatgatggctgaatttcctttggacccacag
ctggctaaaatggttattgcaagttgtgactacaactgttctaatgaggtcctatctatt
actgccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagca
gatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctgaatgtc
taccatgctttcaaacaaaatcatgagtcggttcagtggtgttatgacaacttcattaac
tacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggataga
tttaatttgcctcgtagaagcacagactttaccagccgagactattatatcaacataaga
aaggcgttagttactgggtatttcatgcaggtggcacatttggaacgaacagggcattac
ttaacagtaaaagataaccaggtggtgcagttgcatccctccactgttcttgatcataaa
ccggaatgggtgctctataatgagtttgtccttacaacaaagaattacatccggacatgt
acagacatcaagccagaatggctggtgaaaattgcccctcaatattatgacatgagcaat
tttccacagtgtgaagcaaagagacagttggatcgcatcattgccaaacttcagtccaag
gaatactcacagtactga
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