Rissa tridactyla (black-legged kittiwake): 128909938
Help
Entry
128909938 CDS
T09443
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128909938 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128909938 (ROBO1)
Cell adhesion molecules [BR:
rtd04515
]
Immunoglobulin superfamily
ROBO family
128909938 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
DUF7908
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
128909938
NCBI-ProteinID:
XP_054058467
LinkDB
All DBs
Position
1:complement(113203375..113943722)
Genome browser
AA seq
1615 aa
AA seq
DB search
MIAEFAHFYLFGFICLTSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTI
EWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH
NASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGTPLDDKDERIT
IRGGKLMITYTRKNDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSA
EFKCEARGDPVPTVRWRKDDGELPKARYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKA
EASATLTVQEPPQFVVKPRDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPP
QSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQ
GPVNQTVAVDGTLVLNCVATGTLMPTILWKKDGILVSTQDSRIKQLETGALQIRYAKLGD
TGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTL
SWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTESFAVKGLKPNAIYLFLVRAANA
YGLSDPSQISDPVKTQDVPPTSQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWTVDQ
QSQYIQGYKILYRPTPASYGESEWLIFEVRTPTKNSVIIPELKKGVNYEIKARPFFNEFQ
GADSEVKFAKTLEEAPSAPPQSVSVTKNDGNGTAIVVTWQPPPEDNQNGMVQEYKVWCLG
NESRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGPGVKSDPQFIQLDSHGNPVS
SEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVP
SFTFTPTVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTSGN
GNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKMNEMKTFNSPNLK
DGRFVSQPGQPTPYATTQLIQSNISNNVNNGSGDTNEKHWKPSVQQKQEVAPIQYNIMEQ
NKLNKDYRVNDNIAPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKAPKQAG
MNWADLLPPPPAHPPPHSNSEDYSLSVDESYDQEIPCPVPPARMYLQQDELEEEEEDERG
PTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCQEDLGHIQHQPDRRRQPVSP
PPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADIEVAKMQNRRLLLRGLEQTPASS
VGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKV
ARRQMQDAAGGRRHFHASHCPRPTSPVSTDSNMSAVVIQKVRPAKKQKHQPGHLRREVYT
DDLPPPPVPPPAIKSPTAQSKSQLEVRPVMLPKLASIEARTDRSAERKGASYKGRDGVDG
RQHSDVRTNSGERRESQEQQNDGKLRGNKAPKRDGTPAKTHLLQEDILPYSRPTFPTSNN
PRDPSSSSSMSSRGSGGRQRADQANIARRNVAEMQVLGAYEQGEEEEEEMEETES
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggagtttgctcacttttacctcttcggattcatatgtctcacctcaggctcc
cgtcttcggcaagaagatttcccacctcgaattgtcgaacacccttctgatctaattgtt
tccaaaggagaaccggcaactttaaactgtaaagctgaaggaaggccgacccccaccatt
gagtggtacaaggggggggaaagagtggaaacggacaaggatgacccacgctcccaccgc
atgctgctgcccagtggatctttatttttcttacgcatagtccatgggcgcaagagtagg
ccagatgaaggggtctatgtgtgtgtggcaaggaattaccttggggaagctgtaagtcat
aatgcatcgctggaggtggcaattctacgggatgacttcagacaaaatccatcagatgta
atggtagcagtgggtgaacctgccgtgatggaatgtcagcccccaagaggtcacccagag
cccactatatcatggaaaaaagatgggacccctctagatgacaaagatgagagaattaca
atcagaggaggaaagcttatgatcacatacacaagaaagaatgatgctggcaaatacgtt
tgtgttggaacaaatatggttggagaacgtgaaagtgaagttgcggagctcactgtttta
gagagaccatcttttgtgaagagaccaagtaatttggctgtaactgtggatgacagtgcg
gagtttaagtgtgaggcaagaggtgacccagtccctacagtaagatggaggaaagatgat
ggagaattaccaaaagcaagatacgaaatccgtgatgatcataccttgaaaattcgtaaa
gtaatggcaggagacatgggctcgtatacttgtgttgcagaaaatatggttggaaaagct
gaagcatcagcaactctaacagttcaagagcctccgcagtttgttgtaaagcctcgagat
caggtagctgcactggggagaacggtgactttccagtgtgaagcaactggaaaccctcag
ccagccatcttttggcggagagagggaagtcagaatctgcttttctcataccagccccct
cagtcatccagccgattttcagtttcccagacaggagacctcactatcaccaatgtccag
agatctgatgttgggtactatatctgccagactttaaatgttgcaggaagtatcataaca
aaagcctacttggaagttactgatgtgattgcagatcgacctccccctgtcattcggcag
ggtcctgtgaatcagactgtagctgtagatggtactttagtactgaactgcgtggccaca
ggcactttaatgcccactattctctggaaaaaggatgggatcctcgtttctacccaggac
tctcgcatcaagcagttggagacaggagcattacagatccgatacgccaagctgggcgac
actggtcggtacacctgcattgcttcaaccccaagtggcgaagctacatggagtgcatac
atagaggtccaagagtttggagtcccagtgcagccaccgagacccactgacccaaacttg
attcctagtgctccatcaaaacccgaagttacagatgtcagcagaaatacagtaacattg
tcatggcaacctaatttgaattcaggtgcaacgccaacctcttacataattgaggccttc
agccatgcatctggtagcagctggcaaactgtagctgaaaatgtgaaaacagagagtttt
gcagttaaagggctaaaacctaatgcaatttatctgttccttgtgagggcagctaatgca
tacggactaagtgacccaagccaaatatctgatccagtgaaaactcaagatgttccacca
acaagtcaaggtgtggatcacaagcaggtccagagagaactaggtgatgtggtactacat
ctgcacaaccctactatcctttcttcctcctcaattgaagttcattggactgtggaccag
cagtcccagtatattcaaggatataaaattctgtaccgacctacgccagcgtcctatgga
gagtcggagtggttaatctttgaagtgaggactccaaccaaaaacagcgttatcattccc
gagctgaagaaaggtgtaaactacgaaatcaaggcccgccctttttttaatgagtttcag
ggagcagatagtgaagtgaaatttgcaaagaccctggaagaagctcctagtgctccacct
cagagtgtttcagtaactaagaacgatgggaacgggacggcaattgtggtcacctggcag
cccccccccgaggacaaccagaacgggatggtgcaagaatataaggtttggtgtcttggc
aatgaaagtcgataccatataaacaagacagttgacggttccaccttttctgtagtcatt
ccttccctagttcctggtattcgatatagcgtggaagtggcagcaagtacgggggcagga
cctggagtgaaaagtgatccccaatttatccaattagattctcatggaaaccctgtgtct
tcagaagatcaagtcagtttagcccagcagatttctgatgtagtaaagcagcctgccttt
attgctggaattggtgcagcctgttggattatccttatggtcttcagcatctggttatat
cgccacaggaagaagcgaaacggactcactagtacttacgctggtatcagaaaagtcccg
tcttttaccttcacaccaacagtaacgtatcagagaggaggagaggccgtaagcagtgga
ggcaggccaggactcctaaacatcagtgaaccagccactcagccatggctagcagatact
tggcctaacacagggaacaatcacaatgactgctccatcaactgctgcacctctggcaac
ggaaacagtgatagcaaccttacgacgtacagtcgaccagccgattgtatagcaaattac
aacaatcagctggacaacaagcaaacaaacctgatgttgcctgagtcaactgtatatggt
gacgtggacctcagcaacaaaatgaatgagatgaaaaccttcaatagtccaaatctaaag
gacggaagatttgtcagccagcctgggcagcccactccttatgccaccactcaactcatc
cagtcaaatatcagcaataatgttaacaatggcagcggggatacgaatgagaaacactgg
aaaccctctgttcagcaaaagcaagaggttgcacccatacagtacaacattatggagcaa
aacaaattaaacaaagattaccgggtaaatgacaacattgctccaactattccctacaac
cagtcatatgaccagaatacaggtggatcctacaacagctcggacagaggcagtagtaca
tctgggagtcaagggcacaagaagggtgctcgaaccccaaaggctcccaagcaagctggc
atgaactgggcagatcttcttccaccccctccagcacatccacctccccatagcaatagt
gaagattacagtctttcagtggatgaaagctatgaccaagaaattccttgtcctgtccca
cctgcaaggatgtatctgcagcaggatgagctagaagaagaggaagaagatgagcgaggt
cctactccacctgtccgaggagcagcttcctctccagccgctgtctcctatagccatcag
tcaactgccactctcaccccctctccccaggaagaactccagcccatgttacaggactgt
caggaggatctgggacacatacaacaccaacctgaccggagacgtcaacctgtgagtcct
ccaccccctccaaggcctatctccccaccacatacctatggatatatctcagggcccttg
gtctctgatatggatactgacgccccagaagaggaagaggatgaggcagacatagaggtt
gccaagatgcagaacagaaggctccttttgcgaggccttgagcagacacctgcctccagc
gttggggatttggagagctctgtaacagggtccatgatcaatggctggggttcagcctcc
gaagaagataacatctcaagcgggcggtctagcgttagctcttcagatgggtcatttttt
accgatgcagattttgcacaggctgttgcagcagctgcagaatacgctggcctgaaagta
gccaggcgtcaaatgcaggatgcagcaggaggccgtagacattttcatgcatcacactgt
cctagacccaccagccccgtgtctaccgacagcaacatgagtgctgttgtaatacagaag
gtccgacctgccaaaaagcaaaaacaccagccaggacatctgcgcagagaagtctacaca
gatgacttgccaccccctcctgtgccacctccagctataaaatcaccaaccgcccagtcc
aaatcacagctggaggtgcggccggtcatgttgccaaaacttgcttctatagaagcgaga
acagacagatctgcggaaaggaaaggagcgagctacaaggggagggacggggtggatggg
cgacagcattcagatgtgcggacaaattcgggagagcggagagaatcacaggaacagcaa
aacgatgggaaactgagaggaaataaagcaccaaaacgagacggcacaccagcaaaaact
catcttcttcaagaggacatcctgccatattctagaccaacgtttccgacatcaaataat
cctagagaccccagctcctccagctctatgtcatcgagaggatcaggaggtagacagaga
gcagatcaagcaaatatagcccgaagaaatgttgcagaaatgcaagtactgggggcatat
gaacaaggagaagaggaagaagaagagatggaggaaacagaaagctga
DBGET
integrated database retrieval system
