Rissa tridactyla (black-legged kittiwake): 128910114
Help
Entry
128910114 CDS
T09443
Symbol
PRDM8
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 8
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128910114 (PRDM8)
03036 Chromosome and associated proteins [BR:
rtd03036
]
128910114 (PRDM8)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128910114 (PRDM8)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128910114 (PRDM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
DUF5810
Zf-C2H2_ZNF451_C
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
128910114
NCBI-ProteinID:
XP_054058983
LinkDB
All DBs
Position
5:complement(81272729..81276952)
Genome browser
AA seq
626 aa
AA seq
DB search
MEDAGVQRGIWDGDAKTVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAFIAL
KSTDKRTVPYIFRVDTSAANGSSEGLMWLRLVQSAREREEQNLEAYIKSGQLFYRSLRRI
AKDEELLVWYGKELTELLLLGPARAPARTNGSPPFACPECSQRFQFELPFAAHLRFRCPK
RLHGPDSGPAADAPGGKDGAGKEQEPGKYCKPGGPLHHPFAGAEGGSPAASTKPSTDFHN
LARELENSRGGHGGSPGRPAPAEGGPEGGAGKAKRRYPEEEERGAGGAAARGRFPAERPG
LPAAPKEEPVCAPQQQYRAPGSYCGLEEGGRLFAPPSPETGEAKRSAFVEVKKAARGPEP
DGGGPEEGQERASPAAPGAGGGEPGLCPRGGPGGPLSARLEGGSPARGSAFTSVPQLGGG
GPGGPGGGAEERKSAFSQPARSFPHVPPLVLGQKLGGLGEPCPDGAAAAPARLYAAEALA
VKLPGGGEAAGGGGGGGGGAGGGGGGGLPKQSPFLYATAFWPKSSAAAAVAAAAAGPLQL
QLPSALTLLPPSFTSLCLPAQNWCAKCNASFRMTSDLVYHMRSHHKKEYALEPLVKRRRE
EKLKCPICNESFRERHHLSRHMTSHN
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgccggcgtccagaggggaatatgggacggggacgccaagactgtccagcag
tgcttgactgacattttcaccagcgtttacaccacctgcgacattccggaaaatgccatt
ttcggcccctgcgtcctgagccacacgtccctgtacgacagcatcgccttcatcgccctc
aagtccaccgacaagcgcaccgtcccctacatattccgggtggacacgtcggcggccaac
ggctcgtcggaggggctgatgtggctgcggctggtgcagtcggcgcgggagcgggaggag
cagaacctggaggcctacatcaagagcgggcagctcttctaccgctccctgcgccgcatc
gccaaggacgaggagctgctggtgtggtacggcaaggagctgacggagctgctgctgctc
ggccccgcccgggcccccgcccgcaccaacggctcgccgcccttcgcctgccccgagtgc
agccagcgcttccagttcgagctgcccttcgccgcccacctccggttccgctgccccaag
aggctgcacggccccgacagcggccccgccgccgatgcccccggcggcaaggacggcgcg
ggcaaggagcaggagcccggcaagtactgcaagcccggcgggccgctccaccaccccttc
gccggggctgaggggggcagccccgccgccagcaccaagccctccacggacttccacaac
ctggcgcgggagctggaaaactcccgcggcggccacggcgggtccccggggcggccggcg
cccgccgagggcggccccgaggggggagccggcaaggccaagcggcggtaccccgaggag
gaggagcggggcgccgggggggcggcggcgcggggccgcttcccggcggagcggccgggg
ctgcccgccgcccccaaggaggagccggtgtgcgccccgcagcagcagtaccgggcgccc
ggttcctactgcggcttggaggagggcggccgcctcttcgctccccccagcccggagacg
ggggaggccaagcgcagcgccttcgtggaggtgaagaaggcggcccgcggccccgagccc
gacggcggcggccccgaggagggccaggagcgcgcctcgcccgccgcaccgggggcgggc
ggcggggagccggggctgtgcccccgcggcggccccgggggcccgctgtcggcccggctg
gaggggggcagcccggcgaggggcagcgccttcaccagcgtgccgcagctcggggggggc
ggccccggcgggccgggcggcggggcggaggagcggaaaagcgccttctcccagcccgcc
cgctccttcccccacgtcccgccgctggtgctgggccagaagctgggcgggctgggcgag
ccctgccccgacggcgccgccgccgcccccgcccgcctctacgccgccgaagcgctggcc
gtcaagctgccgggcggcggggaggcggcgggcggcgggggcggcggcggcggcggcgcg
ggggggggcggcggcggggggctgcccaagcagagccccttcctctacgccaccgccttc
tggcccaagagctccgcggcggcggcggtggcggcggcggcggcggggccgctgcagctg
cagctgccgtcggcgctgacgctgctgccgccgtcgttcacctcgctgtgcctgccggcc
cagaactggtgcgccaagtgcaacgcctccttccgcatgacctcggacctggtctaccac
atgcgctcccaccacaagaaggagtacgcgctggagccgctggtcaagcgccgccgcgag
gagaagctcaagtgccccatctgcaacgagtccttccgcgagcgccaccacctctcccgc
cacatgacctcccacaactag
DBGET
integrated database retrieval system
