Rissa tridactyla (black-legged kittiwake): 128910193
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Entry
128910193 CDS
T09443
Symbol
DCHS2
Name
(RefSeq) protocadherin-23
KO
K16507
protocadherin-16/23
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128910193 (DCHS2)
Cell adhesion molecules [BR:
rtd04515
]
Cadherins
Cadherin related
128910193 (DCHS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Mannosidase_ig
RIFIN
Cadherin_4
CADH_Y-type_LIR
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
128910193
NCBI-ProteinID:
XP_054059120
LinkDB
All DBs
Position
5:47776757..47901518
Genome browser
AA seq
3316 aa
AA seq
DB search
MPPHREAARALVNRFPPSAAKPASPPGNQFRPRAPRLQGALALLVPLWWLWAADGGAAPV
YNLSLAVDEGLPAETLVGDIRAGLPAGAGPPGGFLLSEGSGESAVLADFHVQPETGIIRT
ARRLDRERRARYSFAAATLRGEVVQVEIAVTDVNDHPPRFPRDCLQLNVSELSPPGTAFR
LPSARDPDAGRFGTQGYALLEEGGAAGEPPLFQLRYGRPEPLELVLLRRLDRERAETHRL
VVEAWDGGSPRRRGRLQVSVRVLDENDNAPAFSRAEYRARLREDAPPGTAVCRLRATDPD
LGANGEVRYAINRRQSDPDGYFAVEERSGMLRLRRPLDREARALHRVVVEARDGGSQPEV
SSALVSVAVLDVNDNRPVIRLLYLTESGGPRVSEGARPGDYVARVSVSDADEGGEAPAGA
EDGGGGVALSLLGSDGAFALRPAGAGVFFLCVAGPLDRERRDLYELRLVATDGGAPPLSA
EEPLLLRVADLNDEAPAFPQPHYRAAVSEAASPGTAVLRLSAWDADEPGSPNAEVRYALE
GDAAALALLRIDARSGAVSTRARLDRERQAALELRVVARDGGRPPRAAACRLSVRVEDAN
DNEPRFERQVYRGRLPEHAPPGRCPLQVKATDADADQFGEIEYFLYDGFHYYEKSKAFQI
DPRTGQICVSQDIDREGDPTTYDLLVKATDGGGLSAQAFVRIEIEDINDNQPVFEQAVYV
TSISSHTQPGTEIINVVATDRDSGIYGVVTYELVPGEFSSFFTVDTSTGIIYLISALGHL
ACSALLLTVSARDGGGLPSATNAAVTVNILQTGSAPAVFERSRYTFSVPEDTPEDSPIGT
VKAREPPNSLEVVSYRISSGDPHGRFSIDPQFGIIRTKTQLDHETQSVVVLTVQSQLGDS
PVYSSTQVNISVIDINDNPPVFLTQSDRVTISHTQPPGTAVYIAHAEDKDSGLNGAIKYS
IASKQSNAFSIDPSLGVINLTRTVFADKQHAYTLHIAAEDSGIPPLTSSLMLTVIIEEQK
MGPTLVFQNLVYQVEISEATSPGAQILQVQAHSLDPHSVTSKLMYSLEPSTDSVAFGIIS
DTGWIYLRKRLNYECAQILSFRVLVSTPEHENLRQNASTSVIVNVLDENDNSPMFMRENY
FFEMEENPIPRGVVGTITAVDKDSGRNGQLSYFLLSDGKYFKINSNTGEIINWVALDREK
QAHHQLTVLVTDHGSPRLNATAAVFIAVRDLNDNEPLFPQAAPGRELRLKVLEGQPSGTL
ITTVFAKDFDSGSNGVVLYSIEPEEDIGYFQIDAVSGELRTTRSLSHAERPDYRMMVTAR
DQGMPSLQGRAAVYIQVIPLPNGRSVFSQDFKHFVIPENCKPAQVLNFLKWPENHLTTNR
KLHFSIAKEDDDVHFEIDSLTGDLFLSKELDYETASHFLLQVIIKDYNNNPQQNNTVFLS
IDVEDQNDHSPYFQDHFVVIGIEENVPVGTLVYTFNAKDGDGGFLNSKIQYSLEMSNMSK
NPFLIHPSHGTLTTAFPLDREITRSVVLTVSAADQAINLTDRRLDSLAAKIVILDINDNS
PSFTSSPLSYVMEDVEVGFLVHRIIAKDPDEGRNGQVTYHILSGNENKAFILDKITGLLT
TAQLLDREIQNCYNLTLMALDDGSPALFATQVLTIVVLDVNDEAPMFLKQLYETAIRENQ
DPGEFVLKVEAVDRDAGLNSLLRYEILPGTGYEKFKMNPDSGVLLTTASLDRETQEVFRI
KVLVRDSGTPSLSSTVTVICTVLDENDHSPMFLLPTSEIHISENQQPSVVYIARAVDMDA
GNNGVLRYKIIGGNVGEYFTLNNTSGKLLVTRSLDREDISNFTLVIECRDLGSPSRSSTA
QLYLTVLDENDHNPIFAKTKYQISVREDLEEGSAILDLFASDKDDGLNGEVMYSLIDDTF
GAFAIDSVTGSIVTTKALDRETKSQYTFRAVASDCSTHLPRSTTVSVVVHVDDVNDNDPV
FLQNPIRAFVPSETHVNETVATVRAEDMDLGSNGAVVFRLMIAETVFQIDAKTGDIILQE
PLASKDFSTQLLVTASDQGISPRTATAMVIIFTEEEEEEISFSHSLYEASVPENSAAGTS
LLTVEAYEHKFTGENIKYSIFSDKESIFSIHPTTGAITVNKPKSLDYEAKNKIHLSVLAE
NSLNSALCGVTILIQDVNDNAPKFEQSYYKASVWEGQSPKTDIIQIFATDLDSGLNGETE
YSVLSGNENATFVIDSARGILATNTVLDHENASSYRLVVQAADKGNPRLSATSIVRIQVL
DVNDNAPVVQPLGEVEVPENALPGFVVTRVAASDADSRPALQFGFIYDNSPGMKFAINEH
TGVVTVVEPLDFEETAVYKLRIVVSDSVHQTEAELVIRVLDVNDNPPVFTQDSYQVSLPE
LISMDAIVLTVSAVDRDSGHNGMISYKILSSSEGFSIDHKNGSVFTTGPVTQLEKISIIQ
LLIEAMDGGSPTLSAVTSVEVHVEDVNNYAPQFTRDLYNLSVSEDASVGESVLTFSTIDH
DWTHENTYVEYSIIDGNTENLFSVETSIMELETSYKLVGSLVLSNVLDREMASSHRLVLL
ASDRGTPSLNSTATVLITVLDVNDNSPVFSSPEYHIHVKESIPVGSHVTEVSANDCDAGA
NAEITYAIISGNDRGHFHLDEKTGSVDLMKTLDYEDTMKFILIIQATDGGTDVKNVAFSV
VLVSVLDDNDYAPLFLFPSLSCIVSENLPTFSFVCAVNALDFDKGSYGHLTYSIQSSCLA
HREAPRDHDMFFIDPLTGDIHTKQMFDYESQNRYCFIIQAKDKGDSLAVMTVQVDIEGRD
EFDPVFTQQEYFFNLPEKNEAGQLLGRVTASDSDGGLDGVVHYSLLKSSPFFSVNQTSGN
IYLTQTVHRRKNGSKRNDDTLEFLIKAHSPKIESKSTVCTVLVNVSNSPESYPIVSAYSL
TISVSVSLIVFLLLVVSLIALILRHKRKDLMNSCVKKETVSSSATDVNSATEDKDCQKIQ
STESSMLPMGAIAEWLSLAGIREGKDDGVICRHSDSSGHSSAEGETAEDEEIKRINEHPC
RKSAGSALSEHGSRVPDSGIPRESDQLSCQSGEMDVVATMQSMESMQAIKGEGREEACDT
AYAHKMLSQALKKIGIKEKDIMTDLTREYVLMSDSQDSGCDSLATLGTSDEDTGGGYNWD
YVLSWEPRFQPLASVFNDIAKLKNENVHIHSFPKEKKSFVFPPPLITSVAQPGIRTVPPR
MPNVTSGQTFKIHPRSPLIHNLGYPPPTMTPSFSPSLSLLTIQTPTASPVMSDGKMIGTC
LIDPSHELATEEEIQV
NT seq
9951 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgcatcgggaggcagcccgagcgctagtcaaccgcttccccccgtcagcagct
aaaccagcctctcccccggggaatcaatttcggccaagagctccccgactccagggggcg
ctggcgctgctggtgccgctgtggtggctgtgggcggcggacggcggcgcggcgccggtg
tacaacctcagcctggcggtggacgaggggctgccggccgagacgctggtgggggacatc
cgcgcggggctgccggcgggcgcggggccgccggggggcttcctgctgtcggaggggagc
ggcgagtcggcggtgctggcggacttccacgtccagccggagacgggcatcatccgcacg
gcgcggcggctggaccgggagcggcgggcgcgctacagcttcgcggcggccacgctgcgc
ggcgaggtggtgcaggtggagatcgcggtcaccgacgtgaacgaccacccgccgcgcttc
ccgcgggactgcctgcagctcaacgtctccgagctcagcccgcccggcaccgccttccgc
ctcccctccgcccgcgaccccgacgccggccgcttcggtacgcagggctacgcgctgctg
gaggagggcggcgcggcgggggagccgccgctcttccagctgcgctacgggcggccggag
ccgctggagctggtgctgttgcggcggctggatcgggagcgggcggagacgcaccggctg
gtggtggaggcgtgggacggcggcagcccgcggcgccgcggccgccttcaggtgtcggtg
cgggtgctggacgagaacgacaacgcgcccgccttcagccgcgccgagtaccgtgcgcgg
ctgcgggaggacgcgccgccgggcaccgccgtctgccgcctgcgggccaccgaccccgac
ctgggtgccaacggggaggtgcgctacgccatcaaccgccggcagagcgaccccgacggc
tacttcgcggtggaggagcgcagcggcatgctgcgcctccgccgcccgctggaccgggag
gcgcgggccctgcaccgggtggtggtggaggcgcgggacggcggctcccagcccgaggtc
tccagcgctctcgtctccgtggccgtgctggacgtgaacgacaaccgccccgttatccgc
ctgctctacctcaccgagagcggtggcccgcgggtctccgagggggcgcggcccggcgac
tacgtggcccgcgtttccgtctcggacgccgacgagggcggcgaggcgccggcgggcgcg
gaggacggtggcggcggcgtcgcgctgtccctgctgggcagcgacggcgccttcgcactg
cgtccggccggcgccggcgtcttcttcctctgcgtggcgggtccgctggaccgcgagcgc
cgcgacctctacgagctgcggctggtggccaccgacggcggcgccccgccgctctccgcc
gaggagccgctgctgctgcgcgtcgccgacctcaacgacgaggcgcccgccttcccccag
ccccactaccgcgccgccgtctccgaggccgcctccccgggcaccgccgtcctccgcctc
agcgcctgggacgccgacgagccgggctcgcccaacgccgaggtgcggtacgcgctggag
ggggacgcggccgccctggccctcctgcgcatcgacgcgcggagcggcgccgtcagcacg
cgcgcccgcctggaccgggagcggcaggcggcgctggagctgcgcgtggtggcgcgggac
ggcgggcggccgccgcgcgccgccgcctgccgcctcagcgtgcgggtggaggacgccaac
gacaacgagccccgcttcgagcggcaggtctaccgcggccgcctgcccgagcacgccccg
cccggccgctgcccgctgcaggtcaaggcaacagatgcagatgctgaccagtttggtgaa
attgagtattttctctatgatggattccattattatgaaaaatccaaagccttccagatt
gacccacgtactggtcagatctgtgtgtctcaagacatagacagagaaggagatccaacc
acttatgatctcttggtaaaagctacagatgggggtgggctgagtgcccaagcttttgtt
cgcatcgagatagaagatattaacgataatcaacctgtttttgaacaagccgtgtatgtg
acaagcatcagcagtcacacacagccaggaacagagatcatcaatgttgttgccacagac
agagattcgggaatatatggcgttgtcacatatgaactggtcccgggagaattttcttct
tttttcacagtggatacatccacaggaattatttacctgatctcagctcttggccacctg
gcatgttctgcgctcttgctgactgtttctgcgcgggatgggggtggccttccctctgct
accaatgcagccgtcacagtaaacatccttcagactggttcagcccctgccgtatttgag
agatcccgctatactttttcagttcctgaagatacacctgaagacagcccaattggcact
gtaaaggccagagagcctccaaattctttagaagtggtttcttacagaatttcctccggt
gatccacatggaagattctctattgaccctcagtttggtatcatccgcaccaaaacccaa
cttgaccatgaaactcagtctgttgtggtgctcaccgttcagtcacagctgggtgactcc
cctgtctacagtagcacccaggtcaacatatctgtaatagatattaatgacaaccctcca
gtatttcttacccaatcggatagggtaactatttcacatacccagcctcctggcactgct
gtctacattgctcatgcagaagacaaagacagtggcctaaatggagcaatcaaatatagt
attgcaagcaaacagtcaaatgcattcagcattgatccaagccttggagtgataaatctc
accaggacagtgtttgcggataagcagcatgcatatactctacacatagcagctgaagac
agtggaattcctccactgacttcttcgctcatgttgacagtgattattgaagagcagaag
atgggccctactttggtttttcaaaacttggtgtatcaagtagaaatcagtgaagctacc
tctccaggtgcccaaatccttcaggttcaagcccactcacttgatccacacagtgttacc
tccaagctgatgtattccttagagcctagcacagattctgttgcatttggaatcatctct
gatactggctggatttatcttcgtaaacgtttgaactacgaatgtgcacagatactaagt
tttagagtcctggtcagcacacctgagcatgaaaacctcaggcaaaatgcaagtacatcg
gtaatagttaatgtcctggatgaaaatgataattctcccatgtttatgcgtgagaactac
ttctttgaaatggaggaaaatccaattcctagaggtgtggttggcaccattacagcagtt
gacaaagactcaggaagaaacggacaactttcctatttcctcttgtctgatggaaagtat
ttcaagattaattccaacacaggtgaaatcataaattgggttgcactggaccgtgaaaaa
caagctcaccaccaactgaccgtgctagtgaccgaccacgggtcaccgcggcttaacgcc
acggcagccgtgttcatcgccgtgagggacctgaacgacaacgagcccctcttcccgcag
gcagcccccgggcgggagctgcgcctcaaggttttggaagggcagccatcaggaacactt
attaccactgtctttgcaaaagactttgattctggaagcaatggtgttgtgttatattca
atagaaccagaagaggatataggatacttccagattgatgctgtcagtggggagttaaga
acgacccggtctctgtcacatgctgagagaccggactatagaatgatggtcacagccagg
gaccagggaatgccttcgcttcaaggacgtgctgctgtttacatccaggtaatcccactt
cccaatgggagatctgtcttctctcaagatttcaaacactttgtcatacctgaaaattgt
aaacctgcgcaagtgttgaatttcctgaagtggcctgaaaatcatctaacaactaacagg
aaactgcatttcagcatcgctaaagaagatgatgatgtacattttgaaatagatagcttg
actggagacctttttctttccaaggaacttgactatgaaacagcttcgcacttccttttg
caagttatcataaaggattataataataatcctcaacagaataacactgtcttcctaagt
attgatgtagaagatcagaatgatcattctccgtattttcaagatcactttgtagtgatt
ggcatagaggaaaatgtacctgttggcactctggtttacacattcaatgcaaaagatgga
gatggcggttttctgaacagcaaaatacagtattccctagaaatgagtaacatgagtaaa
aacccatttcttattcacccttcgcatggcaccttgaccacagcttttccactagacagg
gagattactcgctctgtggtcctcacagtgtctgcggcagaccaggcaataaatctcact
gatcgcaggcttgattccctggctgcaaaaatcgttattctggatatcaatgacaacagt
cccagttttacgtcttcacctctttcctatgtcatggaggatgtggaggtgggcttcctt
gtgcaccgtataattgcaaaggatcctgatgagggaagaaatggacaagttacatatcac
attctttcaggcaatgaaaacaaagcatttatattggataaaattacaggactcttaact
acagcccagcttctagaccgtgagattcagaactgctataatttgacactcatggctctc
gatgacggcagcccagctctcttcgccacacaggttctaaccatcgttgttcttgatgtg
aatgatgaagccccaatgtttctgaagcaactttatgagactgccattcgtgaaaaccaa
gatccaggggagtttgtgctaaaggtggaagctgtggacagagatgcaggactgaattcc
ttgcttcgatatgaaatcttaccaggaactggttacgagaaattcaagatgaacccggac
agtggagtactcctaacaactgcatcactggacagggaaacccaggaggttttcaggatt
aaagtcttggttcgagacagtggaaccccatcgctgtcaagcacggtgacagttatctgc
acagtgctggacgaaaacgatcactctcccatgtttcttcttcccacctctgagatccat
atttcagagaaccaacagccttctgtcgtttacattgcccgggctgtagatatggatgct
ggaaataatggagttctaagatacaaaataattggtggaaatgttggcgaatacttcaca
ttaaataacacttcaggaaaactgctggtcactcgtagcttagacagagaagacatcagc
aatttcactcttgtaattgagtgccgtgacctaggcagtccctcaagaagctccactgca
cagctgtatctgacggtcttggatgaaaatgaccacaacccgatatttgcaaagaccaag
tatcaaatctctgtgagagaagacctagaagaaggctcagccatcctggacctctttgct
tctgacaaagatgatggcctaaatggcgaagttatgtactccctcattgatgacaccttc
ggagcatttgctattgacagtgtaacggggtctatagttactacaaaggcactggaccgg
gagaccaaatcccagtatacatttagggctgtggcaagtgactgtagcacccatttgcca
agaagcaccactgtcagtgttgtggtgcacgttgacgatgtcaatgataatgatcctgtt
tttttgcagaatcctatcagggcctttgtcccttctgaaacccatgtgaatgagacagta
gccactgtgagagcagaggacatggatctgggatcaaacggagctgttgtttttagactg
atgatagcggaaactgtatttcagatcgacgcgaagacaggtgacatcattctacaggag
cccttggcttccaaggacttcagtacccagctgctagtgacggcttcagatcaaggtatc
tcacctcgaacagccacagctatggtcattatctttacagaagaagaagaggaggagatt
tcattcagccatagcctgtatgaagcaagcgtgcctgagaacagtgcagcaggtacatca
cttctaactgtagaagcttatgaacacaaatttacaggagaaaacataaaatacagcatc
ttcagtgacaaggaaagcatattctccatacaccccactacaggtgcaatcacagtaaac
aagccaaagtctcttgattatgaagctaagaataaaatacatctttcagttttggctgaa
aatagcttgaattcagcactctgtggagtgacaattttgattcaagatgtgaatgacaat
gcacctaaatttgagcaaagctattacaaagcatcagtatgggaaggccaaagtcctaaa
acagacatcatacagatatttgcaactgaccttgacagtgggctgaatggagaaactgaa
tactcagttttatctggtaatgaaaatgcaacatttgtaattgattcagcaagagggatt
ttagcaactaatacagtcctagatcacgaaaatgcttcatcttacaggttggttgtacaa
gctgctgataaaggaaatcccagactttctgctacaagtattgtgcggatacaagtgtta
gatgttaatgacaatgctccagttgtccagccactaggtgaagtggaggtcccagaaaat
gccctgcctggttttgtagtgactcgggtggcagcaagtgatgcagactccaggccagca
cttcagtttggttttatttatgataatagtcctggaatgaaatttgccatcaacgaacac
accggtgtagtaacagtggtggaaccattagattttgaagaaactgctgtgtataagctg
agaatcgtagtttcagattctgtacatcaaacagaagccgaacttgtcatccgtgttttg
gacgtcaatgataacccaccagtgtttactcaggattcgtatcaggtgagcttgccagag
ctcatttctatggatgccattgttctgacagtctctgctgtggatagggattcggggcat
aatggaatgatttcctacaaaatcctctcttcctctgagggattttccattgatcacaag
aatggttcagtgttcactacgggaccagtgacacagctggaaaagatttccattattcag
ctcctgatagaagccatggatggtggcagtcccactctgagtgcagttacctccgtagag
gtgcatgtagaagatgtaaataactatgcccctcagttcacaagagatctgtacaatctc
agcgtgagtgaggatgcctcagttggagaaagtgtcctcacattttcaaccatcgaccat
gattggacacatgaaaacacgtatgttgaatattctattattgatggcaatactgagaat
ttattctcagtggaaacaagcatcatggagttagaaacatcctacaaacttgttggcagt
cttgttttgagcaatgttctcgacagggaaatggcttcttctcaccgtttggttctcctt
gcctctgatcggggaacgccctccttgaattcaactgctactgtgctaataactgtgctg
gatgttaatgataattctccagtatttagcagtccagagtaccatattcatgtcaaagaa
agcatccctgtaggtagtcatgtcactgaagtttcagcaaatgactgcgatgcaggcgct
aacgcagagatcacatatgctatcatctctggaaatgacaggggacattttcatttggat
gagaaaacgggatcagtggatttgatgaaaacgctggattatgaggataccatgaaattc
attttgatcatccaagccacagatggaggaactgatgtaaaaaatgtggctttttctgtt
gttcttgttagcgtcctagatgacaacgattatgcccccctgtttttgtttcccagcctg
agctgcattgtcagtgaaaatctgcctaccttttcttttgtttgtgctgttaatgcactg
gattttgataaaggctcctatggacaccttacctactccatccagtcttcatgtttggct
catcgtgaagctcctagagaccatgacatgttcttcattgatcctttgacaggagatatt
catacaaagcaaatgtttgactacgaaagtcagaataggtactgtttcataatccaagca
aaagacaaaggtgactcgctggctgtcatgacagttcaggtagatattgaggggagagat
gaatttgacccagtctttacacaacaggagtatttctttaatctccctgagaagaatgaa
gcgggccagttgcttggcagagtgacggcatcagacagtgatggtggactggatggagtt
gttcattactccctgctaaaaagttctccattcttttctgtgaatcaaaccagtggtaat
atttatttgactcagactgttcaccggaggaaaaatggcagcaaaaggaatgatgacacc
ctggaattcttgataaaagcgcatagccccaaaattgagtcaaagtccacagtatgcact
gttttggtaaatgtttccaattctcctgaaagttatcccatagtgtcagcatacagcctg
accattagcgtttcagtctccttgatagtgttcctactgcttgtggtcagtcttattgca
cttattctgagacataagcggaaagatctgatgaattcttgtgtgaaaaaagaaacagta
tcctcctcagctactgatgtgaattcagccacggaagataaggactgccagaaaatccaa
agtactgagagcagtatgcttcccatgggtgccatagcagaatggctgagcctagcagga
atcagagaggggaaggacgatggtgtcatctgcaggcattcagactccagtggccacagt
tctgctgaaggagaaactgcagaggacgaggaaatcaaaaggatcaatgaacatccttgc
agaaagagtgctggctcggcactgagcgagcatggctcacgggtgccagattcggggatc
ccaagagagtctgatcagctctcctgtcagtctggagaaatggatgtcgtggctaccatg
caaagcatggagagcatgcaggctattaaaggagaaggcagagaagaagcctgtgacaca
gcctacgcacataaaatgttgtctcaagcacttaagaaaattggaataaaagagaaagac
ataatgacagacctcacgagagaatatgtcttgatgtcagatagtcaggattctgggtgt
gattcacttgcaactcttggcacctctgatgaagatactggaggtggttataactgggat
tatgtgctcagttgggaacccagatttcagcctcttgcctcagtgtttaatgatattgca
aaactgaaaaatgaaaacgtacacattcatagcttccctaaggagaagaaatcttttgtt
tttcctcctcccttgataacatcagtagctcagcctggcataaggacagtgcctccacga
atgcccaatgtaacatcagggcaaacatttaaaatccaccctcgttctcctcttatccat
aatcttggataccctccaccaaccatgacccccagtttttctccttctctctctctactt
accatacagacgcctactgcttctccagtaatgtctgatgggaaaatgataggaacatgt
cttattgatccaagccatgaacttgcaacagaggaagaaattcaggtctag
DBGET
integrated database retrieval system
