Rissa tridactyla (black-legged kittiwake): 128910218
Help
Entry
128910218 CDS
T09443
Symbol
LRRTM1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
128910218 (LRRTM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_NXF1-5
LRRNT
LRR_12
UL97
HemY_N
DUF5305
ComGG
HYR
Motif
Other DBs
NCBI-GeneID:
128910218
NCBI-ProteinID:
XP_054059155
LinkDB
All DBs
Position
5:37245188..37246753
Genome browser
AA seq
521 aa
AA seq
DB search
MDFLLIGLCLNWLLRKPPGLILCTLGIFSKMLPAVNSGCPQLCRCEGRLLYCESLNLTEM
PRNLSGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTL
SSNKITQLPNTTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRI
FQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCL
RRNKVTIVVNTLDWIWQLEKMDLSGNEIEYIEPHVFESVPHLKSLQLDSNRLTYIDSRVL
DSWKSLTSISLSANAWDCSRNVCALASWLSNFKGRYDSNLLCATPEYAQGEDVLDAVYAF
HLCEDAADPTSVNTLSPVTNNSDQTFSYGSATATYDVQDSEGDQTTYAITVTMPSENSEN
AVQIHKVVTGTMALIFSFLIVVLVLYVSWKCFPASLRQLRQCFVTQRRKQKQKQTMHQMA
AMSAQEYYVDYKPNHIEGALVIINEYGSCSCHQQPARECEV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggatttccttcttatcggtctctgtttaaactggctgctgaggaagcccccggggttg
atattgtgtacgctgggtatcttttctaaaatgcttccagccgtgaatagtgggtgtcca
cagctatgtcggtgtgagggcaggcttttgtactgtgaatcactgaatcttacagagatg
cctcgcaacctgtcgggcatgatgggcttgtctctgcggtacaacagcctttcagagctg
catgatggacagttcacagggttaatgcagctcacgtggctctatctggatcacaatcac
atttgctcagtggaggggaatgcctttcaaaaattgcggcgagttaaagagctcaccctg
agttccaacaaaataacccaactgcccaacaccactttccgacccatgccaaacttgcgc
agtgtggatttatcatacaacaacctacagtctttggagcctgacctgtttcacgggctg
agaaaactaacaactttgcacatgcggtcgaacgccatcaagttcgtgccagtgagaatt
tttcaggactgtcgcagcctgaagtttctagacataggatacaatcagttaaagagcctg
gctcgaaactcttttgcaggcttgttcaaactcactgagctgcacctcgagcacaatgac
ttggtgaaggtgaatttagcccattttcccaggctcatctccctgcactccctctgcttg
cgaaggaataaagttaccatcgtagtaaacactttggactggatatggcaacttgaaaaa
atggatctctccggcaacgaaatcgaatacatcgaacctcatgttttcgaaagcgtacct
cacctcaaatccctgcagctggactccaaccggctgacctacatcgactcccgagtcctt
gactcctggaagtccctcactagcatcagcctttctgcaaacgcctgggattgcagccgt
aacgtttgcgccctggcctcctggctgagcaacttcaagggtcgctacgacagcaatctg
ctctgtgccacccctgagtacgcacagggcgaggatgttttggacgcggtgtacgctttt
cacttgtgtgaagacgcggcagacccaacgagtgttaacaccctctccccagtaacgaac
aacagcgaccaaacgttcagctacggctctgccactgccacgtacgacgtgcaggacagc
gaaggggaccaaacaacatatgccataaccgtgaccatgcccagcgagaactcggagaac
gccgttcagattcacaaggtggtgacggggaccatggcactgattttttccttcctcatc
gtggttttagtgttgtacgtctcctggaagtgctttccagccagcttaaggcaactaaga
cagtgctttgtaacacagcgcagaaagcagaagcaaaaacagaccatgcatcaaatggct
gccatgtcagcccaggagtattacgttgattacaaacccaaccacattgagggagccctg
gtgatcattaatgagtacggatcttgttcctgtcaccagcagccagcgagggaatgcgag
gtgtga
DBGET
integrated database retrieval system
