KEGG   Rissa tridactyla (black-legged kittiwake): 128910406
Entry
128910406         CDS       T09443                                 
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3
  KO
K06099  cold shock domain protein A
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04530  Tight junction
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    128910406 (YBX3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rtd03000]
    128910406 (YBX3)
   03041 Spliceosome [BR:rtd03041]
    128910406 (YBX3)
Transcription factors [BR:rtd03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, DbpA-like
    128910406 (YBX3)
Spliceosome [BR:rtd03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    128910406 (YBX3)
SSDB
Motif
Pfam: CSD OB_RNB Bim_N S1CSD-TOTE-2
Other DBs
NCBI-GeneID: 128910406
NCBI-ProteinID: XP_054059541
LinkDB
Position
1:141706112..141728842
AA seq 301 aa
MSEAAETSTASPPPAAAATTTTTTVAAAAAPAGTPAPPPDAKPKSPVSAAAPGAAVGEAA
PAAAAAAATTTSTTTVTTAAAETEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVH
QTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRR
GYYGRRRGPPRSGGEGEIKDGVTEGGQLQQVHRNPTYRPRYRRGPPRPRPAPVAGEAENK
ENHHEANAMSQQPLRRGYRRPYNYRRRPRPPNAPAQDGKETKVTETPAENPAPVTEQSGA
E
NT seq 906 nt   +upstreamnt  +downstreamnt
atgagcgaggcggcggagaccagcaccgccagcccgccgcccgccgcggccgccaccacc
actacgactaccgtagcagctgccgccgccccggcaggaacccccgcgccaccgccggac
gccaagcccaagagccccgtcagcgccgccgcgccgggtgcggctgtgggtgaggcggcc
cccgctgctgctgccgccgccgccaccaccaccagcaccacaaccgtcacaactgccgcg
gccgagacggagaagaaagtgctggccaccaaagttcttggcacagtcaagtggttcaat
gtcagaaatggatatggctttatcaacagaaatgataccaaagaagacgtgtttgttcat
cagacagcgataaagaaaaacaacccacggaaatatctgcgcagtgttggtgacggagag
actgtagaatttgatgtggttgagggagagaagggtgcagaagcagctaacgtcactggt
ccagatggagtccctgtagaaggcagccgttatgctgcagaccggcgccgctatcgacgt
ggctattatggccgacgccgtggacctcctcgaagtggtggtgagggagagataaaggat
ggtgtcacagaaggaggacaacttcagcaagtccataggaatcctacctatcgtccccgc
tatcgcagagggcccccgcgtccacgccctgccccagtggctggagaggctgaaaacaaa
gagaaccatcacgaggccaatgctatgagtcagcagccacttcgtcgtgggtataggcgc
ccatacaactaccggcgtcgacctcgtccacccaatgctccggctcaggatgggaaagag
acaaaggtgactgaaacacctgctgaaaatcctgctccagtgaccgagcagagtggtgct
gagtaa

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