Rissa tridactyla (black-legged kittiwake): 128910407
Help
Entry
128910407 CDS
T09443
Name
(RefSeq) general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128910407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtd03021
]
128910407
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
128910407
Prokaryotic type
Archaeal type
TFE
128910407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_Ribbon_TF
Cas12f1-like_TNB
Zn_ribbon_PaaD
DUF7999
Motif
Other DBs
NCBI-GeneID:
128910407
NCBI-ProteinID:
XP_054059538
LinkDB
All DBs
Position
5:8498470..8506885
Genome browser
AA seq
445 aa
AA seq
DB search
MAQLVSKPGQAAWVLIQLSYGDSTSSLFQCSPALPVGSRAVQLLMEEQNFITEIPAVLKR
LAKYVVRGFYGVEYSLALDVLIRYPCVKEDDLLQLLKYERKQLRTVLNTLKADKLVKLRM
RVETGPNGKSTRHNYYYINYKVLVDVVKYKLDHVRRKIEADERDSTTRSSFKCPSCSSTY
TDLEVNQLFDIFTETFRCTYCNTEVEEDASALPKRDARTLLAKFNEQIEPIFALLRETED
IVLPYDLLEPQPTEIPELSESFDQKVGSSVLESCGRPEKWANRSSSFDNMYTQNLVIDVR
DSEPKKKTREKATKEQPIWLSESTVEGATTANNSVGVNASEETEESVKETVTNNEIIKTL
LIHESKSSSSTDQVPVVRSKLPESGSDTSDSEDAKHSRGAGTQAAGSNSDQEEQETQGLP
LSQCPQNCQVFPAHSIPMSLNLRSN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcacaactagtctcaaagccgggtcaggctgcttgggttcttatccagttgagctat
ggagactcgacctcctccctgttccagtgttcccctgctcttccagtgggaagtagagcg
gttcagctcctgatggaagagcaaaactttatcacggagatcccggcagtcctgaagcgt
ctggccaaatatgtagtgcgtggtttctatggagtggagtattccctggccctcgacgta
ctgatccgctacccctgcgtgaaggaggacgacttgttacagctgctcaagtacgaacgg
aaacaactgcgtaccgtcctcaacacgctcaaggccgacaagctcgtgaagctgcggatg
cgagttgaaacggggcctaacgggaagagcacaaggcataattactattacatcaattac
aaggtgctggtggacgtggtaaaatacaaactggatcacgtacgccggaaaatagaggcg
gatgagagggattcaactacccggtcctcctttaaatgtccatcttgctccagcacttac
acggacctggaagtcaatcagctctttgatatatttacagagactttccgctgcacttac
tgcaacactgaagtggaagaagacgcctcggcgcttcccaagcgcgacgctcgaaccctg
ctcgccaaattcaacgagcagatcgaacccatcttcgcgctgctgcgggagactgaggat
atcgttctgccgtacgacctgctggagcctcagccaacagaaatacccgagttatcagaa
agctttgatcagaaggtgggttcgagtgtgctggaatcctgcggccgacctgaaaaatgg
gccaacagaagttcctcttttgacaatatgtacacccaaaacttggttatcgatgtccga
gactctgagcccaagaagaaaacgagagagaaagcaactaaagagcaacctatctggctg
tcagagagcactgtggaaggagcaacaacagccaacaacagcgtgggagtaaatgcttct
gaagaaactgaagaaagcgttaaagaaaccgtcaccaataacgaaatcatcaagactctt
ctgatccacgaatccaagtcatcatctagcacagaccaggttcctgttgtcagaagcaaa
ctacctgagtcgggcagtgacaccagtgactctgaagatgccaagcactccagaggagca
ggaacgcaagcagctggcagcaactctgaccaagaggaacaggaaacgcaaggtttgcct
ttgtcacaatgtcctcaaaattgccaagtttttcctgcacacagtatccccatgagttta
aacctgcgcagtaactaa
DBGET
integrated database retrieval system
