Rissa tridactyla (black-legged kittiwake): 128910431
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Entry
128910431 CDS
T09443
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03030
DNA replication
rtd03410
Base excision repair
rtd03420
Nucleotide excision repair
rtd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128910431 (RFC1)
03410 Base excision repair
128910431 (RFC1)
03420 Nucleotide excision repair
128910431 (RFC1)
03430 Mismatch repair
128910431 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtd03032
]
128910431 (RFC1)
03400 DNA repair and recombination proteins [BR:
rtd03400
]
128910431 (RFC1)
DNA replication proteins [BR:
rtd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128910431 (RFC1)
DNA repair and recombination proteins [BR:
rtd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128910431 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_14
Rad17
AAA_22
BRCT_2
AAA_5
AAA_16
AAA_30
AAA_18
RuvB_N
AAA_17
RNA_helicase
AAA_33
AAA_7
nSTAND3
TIP49
AAA_19
NTPase_1
Motif
Other DBs
NCBI-GeneID:
128910431
NCBI-ProteinID:
XP_054059576
LinkDB
All DBs
Position
5:16398828..16440770
Genome browser
AA seq
1152 aa
AA seq
DB search
MLDIRKFFGVVPPGKRQESETVKKSEKITNGQGPSSGKKRGKETKVNNSPSDDDYKQKRT
NKKKRIIYDSDSEEEVQSVKKSKKPSEKKAATSKLGKVLKQDPVVYISETDEEDDFVNKR
ISLKPKENGTSTIGCPGTTTVKKEDVKPRPKSKPLSPVKQTPTSALDYFGTSSVQRSEKK
LVASKRKEPSPSRDSTVDDEAIAKQLQLEEDSELERQLHEDEEFAKTLAMLDETPQKKKA
RKDSGGEQTVLSTKTSPNVVERYKQSERVKATNSTGEAKNYAAKQQTKSERSKGSPSSPQ
SSDGKTARELMDKTLPLRPSSKLVSLKQKEEVAEKGRGAQSLVSKEKIASRKEEKTTPKK
EKISPKKSESVSPEDSEKRRTNYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVITG
VLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKCEKASTLGTKVIDEDGLF
DLIRTMPGKKSKYELAAETEAKKADSRPKRTPQKAEKRNFSPIKREADNKKYKSTPEKGD
SVKSVKKETTAVRKLMDFKRQTVEKKETPKPKENLISETNEDGTERLLWVDKYKPVSLKA
IIGQQGEQSCANKLLRWLRNWNKSTSEDGQAKTNKTGGKDDGTGFKAALLSGPPGVGKTT
TASLVCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTSSSVSGKHVLIMD
EVDGMAGNEDRGGIQELIGLIRHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRLEQI
KGAMMSIAFKEGLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKSLTYDEAKTDAGRA
KKDIKLGPFDVVRKVFATGEEASRMSLIDKSDLFFHDYSLAPLFVQENYVHVKPAAAGGN
LKKHLVLLSRAADSICDGDIVDKQIRSKQNWNLLPTQAIYASVLPGELMRGYMSQFPVFP
SWLGKFSSTGKHDRIIQELAMHMSLRTQACKRTVNMEYLPYLRDALVQPLKDLGADGVQE
TITFMDSYCLMKEDIENIMEISTWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLHSV
KTPKRQSGSAVTLELNEGLNVEEIQSDEDEEDTVESDAMIKQKKPKSSKLPKREKNEETT
KKEGKRKEKTRH
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgctggatatccggaaattctttggcgttgtacctcctggaaagcgacaagaatctgag
actgtaaaaaagagtgaaaaaattacaaatggtcaaggaccatcaagtgggaagaaaagg
ggaaaggagactaaggtgaataattcacccagtgacgatgattacaaacaaaagcggaca
aacaagaaaaaaagaataatctacgattcagattcggaagaggaggtgcagtcagtgaaa
aaatccaagaagccatctgagaaaaaagcagctacttcaaaacttggtaaagttctaaag
caggatcctgttgtttatatttcagagacagatgaagaagatgactttgtcaataaaaga
atttccctgaaaccaaaggagaatgggacgtcaactatcggttgtccaggaacaactaca
gtgaaaaaggaagatgtaaaaccacgacctaaaagcaaaccattatctccagtgaaacag
actcccacctcagcacttgattattttgggacaagtagtgtccagcgatcagaaaagaaa
ctggtagcaagtaaaaggaaagaaccttcaccaagcagagacagcacagtagatgatgag
gccattgctaagcaactgcagcttgaagaagattcagagctggagagacagctgcatgaa
gatgaagaatttgctaaaactttggccatgttggatgaaacaccacagaagaaaaaggct
cgtaaagattcaggaggagaacaaacagtattgagcaccaagaccagtcctaatgtggtg
gaaagatataagcagtcggaaagagtgaaagcaacaaattcgacaggtgaagcaaagaat
tacgctgcaaagcagcaaactaaatctgaacgttcaaaagggtctccttcatccccacag
tcatctgatggtaaaacagcaagagagttgatggataagacattgcctttgagacctagc
tctaagcttgtatctctcaaacaaaaagaagaggttgctgaaaagggaagaggtgctcaa
agtttagtatcaaaagaaaaaattgcttcaaggaaagaagagaagacaacaccaaagaag
gagaaaatttcccccaagaagagtgagtctgtaagtcctgaggactctgagaagaggaga
accaattatcaagcctaccgaagcttccttaatcgtgagggtccgaaagcactgggttcc
aaagagatacctcagggagctgaaaactgcttggaaggcctgacattcgtaattacaggc
gttttggagtctattgaaagagatgaggccaagtctctgattgaacgttacggaggaaaa
gtaactggcaatgtcagcaagaagacaaactatctggttatggggagagactgtggccaa
tctaaatgtgaaaaggcgtcgactttagggacaaaagttatcgatgaggatggcctgttt
gatcttattcgaactatgccaggcaaaaagtccaaatatgagctggcagctgaaacagag
gcaaagaaagcggattcaaggcctaaaaggacaccacagaaagctgaaaaaaggaatttt
agccccatcaaaagggaagctgataataaaaaatataagtctactcctgaaaaaggagat
tctgtcaaatctgttaagaaagaaaccactgctgttcgaaagcttatggactttaaacgg
caaactgtagagaagaaagaaaccccaaaacctaaggagaacttgatttctgagactaat
gaagatggaacggagagattgctatgggtagataaatacaagcctgtatctcttaaggca
ataattggacagcagggtgagcaaagctgtgccaataaactgctccgatggctccgaaac
tggaacaagagtacctcggaagatggacaagcaaagaccaataaaactggaggcaaagat
gatggtactggttttaaagcagcattactttctggtccacctggagttggtaaaactact
acagcttctttggtttgtaaggaactggggtatagctatgtggagctgaatgccagtgac
actcgcagtaagaacagtctaaaggaagtagttgctgaatcgcttaacaacaccagcatc
aaagacttctgttctggcacatcctcatcagttagcgggaaacatgtattgatcatggat
gaagtggatggtatggcaggcaatgaagacagaggagggattcaggagttgattggtttg
attagacacacaaagatacccatcatctgtatgtgtaatgaccgcaaccatcctaaaatt
cgttccttggtccactactgttttgatcttcgttttcagagacctcgtctagaacagatc
aagggtgccatgatgtctattgcatttaaagaaggtttaaaaattccaccacctgctatg
caagagataatcctggcagcaaatcaggacatcagacaggttttacataaccttaatatg
tggtgtgcaaaagataaatcattgacctatgatgaggctaaaacggatgccggcagagcc
aaaaaggatatcaaactgggcccttttgatgttgtccggaaggtttttgcaacaggagag
gaggcttctcgtatgtctcttatagacaaatcggatctgttcttccatgattattccctg
gcacctctctttgttcaagagaactatgtacatgtgaaaccagccgctgctggaggaaat
ctgaagaagcacttggtgcttttgagtagagcagctgatagtatatgtgatggtgatata
gtggacaagcagattcgtagcaagcaaaactggaatcttcttccaacacaggctatttat
gcaagcgttctcccaggggagctgatgagaggttacatgtcccagtttcctgtctttccc
agctggctggggaaattttcatccacgggcaaacatgatcgtatcattcaagaactggca
atgcacatgagtctcaggacccaggcgtgcaagaggacagtaaacatggagtatttgccc
tatttgcgggatgcgcttgtccagcccttgaaagaccttggagcagatggcgtacaagaa
actataacgttcatggactcttactgcttgatgaaagaagatattgaaaatatcatggaa
ataagcacatggggaggcaaacccagtcctttttcaaagctggatcccaaggtcaaagca
gcttttacacgtgcctacaacaaagaggcgcatctcactccatattcacttcattctgtc
aagacacctaaaaggcagtcgggatctgcggtgaccttagaactgaacgaaggcttgaat
gtggaagagatccagtctgatgaggatgaggaagatactgttgaaagtgatgcaatgatt
aagcaaaaaaagccgaagtcttccaagttgccaaaaagagagaaaaatgaagaaacaaca
aaaaaagaagggaaaagaaaagagaagacaagacattaa
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integrated database retrieval system
