Rissa tridactyla (black-legged kittiwake): 128910473
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Entry
128910473 CDS
T09443
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128910473 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128910473 (MID1)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128910473 (MID1)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128910473 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
TRIM_CC
zf-C3HC4
zf-C3HC4_2
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
128910473
NCBI-ProteinID:
XP_054059698
LinkDB
All DBs
Position
1:complement(82857976..83119561)
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AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR
YVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNSMSSCEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDQLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFTREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGISYKSAPKHEWIGKNSASWVLCRCNNTWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSLAFYDALNSLHLYTFDITFGQPVCPTFTVWNKCLTIITGLPIPDHL
DSSEQLA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggaactgacctgccctatctgtctggagctgtttgaagacccg
ctgctgctgccttgcgctcacagcctctgcttcaactgcgcgcaccgcatcctggtctcc
cactgcgccaccaacgagccggtggagtcaatcaccgccttccagtgcccgacctgccgc
tatgtcatcaccctcagccagcgcggtctagacgggctcaagcgcaacgtcaccctgcag
aacatcatcgacaggtttcagaaagcctcggtcagcgggcccaattcccccagcgagacc
cgccgggagcgggcgtttgatagcaacagcatgtcgtcctgcgagaaggtcctctgccag
ttctgcgaccaggaccctgcccaggaggcagtgaagacctgcgttacctgcgaggtgtcc
tactgcgaggagtgcctgaaagccactcaccccaacaagaagccgttcaccggccaccgg
ctcatcgagcccatcccggactctcacatcaggggattaatgtgcttggagcacgaggac
gagaaagttaacatgtactgcgtgaccgacgaccagttaatctgtgccttgtgtaagctg
gtcgggcggcaccgtgaccatcaggtggcagctttaagtgagcgctacgacaagctaaag
caaaatttggagagtaacctcaccaaccttattaagaggaatactgaactggaaactctt
ttggcgaaactcattcagacctgtcaacatgtagaagtaaatgcatcccgccaagaaacc
aagctgatggaagaatgtgaccagctcattgaaataatccagcaaagacgacaaataatt
ggaaccaaaatcaaagaaggaaaggtggtgaggttgagaaaactggctcagcagattgcg
aactgcaaacagtgcattgagcgctcaacatccctcatctctcaggctgaacagtcgctg
aaggagaacgatcatgctcgcttcctgcaaactgctaaaaatatcactgaaagggtttcc
atggcaactgcatcatcccaggttctaattcctgaaattaatctcaatgatactttcgat
actttcgcacttgattttaccagggagaagaaattgttggaatgccttgattaccttaca
gctcccaacccacccaccattcgagaagaactctgtacagcttcttatgataccattact
gtccactggacatcggatgatgagttcagtgtggtctcttacgagctgcagtacaccatc
ttcaccggacaagctaatgttgttagtttatgcaactcagccgacagctggatgattgtt
cccaacatcaaacaaaaccactacacagtgcacgggttacagagtggcactaagtacatc
ttcattgttaaggccattaatcaggcgggcagcagaagcagcgagcctggcaagctcaag
acaaacagtcagccatttaaactggaccccaaatctgcacataggaaactgaaagtgtcg
catgataacctgacagtggaacgtgatgaaacatcctccaagaagagtcacacaccagag
cgattcaccagccaagggagctacggagtagctggcaatgtgttcattgacagcgggcgg
cattactgggaagtggttataagcgggagtacatggtatgccattggcatttcttacaaa
tcagcaccgaagcacgagtggatcgggaagaattctgcctcctgggtgctttgccgctgc
aataacacgtgggtggtgcggcacaacagcaaagaaatccccatcgaacccgcgcctcac
ctccggcgggtggggattttgctggactatgacaacggttcccttgctttttatgatgct
ttgaactccctacacctttacacctttgacattacatttgggcagccggtgtgccccaca
ttcactgtgtggaataagtgtttgaccattataactggcttacctatccctgaccaccta
gactcctccgagcagcttgcgtga
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