Rissa tridactyla (black-legged kittiwake): 128910537
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Entry
128910537 CDS
T09443
Symbol
SIGLEC1
Name
(RefSeq) sialoadhesin
KO
K06548
sialoadhesin
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128910537 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rtd04090
]
128910537 (SIGLEC1)
04091 Lectins [BR:
rtd04091
]
128910537 (SIGLEC1)
CD molecules [BR:
rtd04090
]
Proteins
128910537 (SIGLEC1)
Lectins [BR:
rtd04091
]
I-type lectins (Siglecs)
128910537 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
Ig_5
Ig_4
C1-set
Ig_CD22
C2-set_2
Motif
Other DBs
NCBI-GeneID:
128910537
NCBI-ProteinID:
XP_054059879
LinkDB
All DBs
Position
5:complement(41238824..41258849)
Genome browser
AA seq
1683 aa
AA seq
DB search
MGLPWWLVLLASLVPPALGSWGVTYPEALQGVRGSCVVVPCTLSYPSNVAAGDGIVAIWY
KDYDTQKALVYHSAAQEVDARFRGRAQLLGDPATHNCTLLLRGVTPEDSGPYRFRFEIVN
GDRWSAARDVMLSVSDALEHPSTATSEEQTEGQTSTLECSTPYVCPPGDVALRWEGYNPQ
VSTLSGRVQLDTSGVGQHLTLTTSFSWKDHSKKLLCEVSYGSRKATGEVVLRVRHTPKDI
QVSVNPSTQNIRMGDTVSLTCEVSSSYPPVSAYHWYKDGVVMGSEQILTLRGVRREDYGQ
YHCKAENAVGAGVAPAVTLYVFSAEISVSPAAEVQEGTATTLSCDVPGREGQDLNYTWYK
NNAWLKEGTVHTLLFHRVAASDAGYYSCKVMNDRGSDTSQAISLSVTYPPRNPTITLFQE
TQGGRLAIIRCAVDSHPPATIALYRDDTLVAASGSQAAPHQRLGVTTSRNALRLEIRDVG
PQDSGSYRCVATNAYGNASATKPFVARATEILIQPSAEVREGAAVTLTCLGARGAAAEET
LYTWYRNSRWLRESSAPTLRFPSIRGEDAGAFQCRVRSSNGSDKSAAVPLRVLFPPRRPV
MSSFLETHSGHLGIIQCTVESDPEANLTLWREGEVIACTRGCPTAPNPRVRATLSYNSLK
VEIQDVVLEDEGTYVCWAGNPQGNASAAMDFRAETASITVSPSSHVLEGHAANLTCRLSS
DSLALPNFTWYRNGRWLAGGSATSLVFRQVASTDAGLYHCRATTDGSSRSSPAVSLDVLY
PPRDPDLTAFLETERGRLAIFQCSVVSNPPARLALHLGEELVAASDAGSSPSPRVAASAT
PNTLRVEIREVTPADEGSYRCTATNAHGTASRHLYFRVQTARVLVSPSTEVREGDDVSLT
CQVVGEPQDDTVYSWYKNSERLQESPDNFLALPHIASAAAGSYHCRAHSPSGTSISPAVA
LRISYPPRAPVLTSFLETPEGQRGVLQCAVDSNPRAELSLFKDQALVASTALPQPTAPPR
LSVALAFNMLRVSIHPVLLEDEGEYLCSASNAYGNASATVNFTAGTARVWISPSPDIREG
NAVNLTCAVETGSREVLSYTWYKNKVWFRSSSSPALIFPSVAAADAASYHCTVQTPARTR
SSAPTTLNVLYPPRNLQMKAFVESGEGMAVILLCTVESNPLSEITLLKEGQPVASSLPVG
GDHPRQSSRISPAPNTLRLELREASEEDEGEYECWAHSLLGSTQASLPLRVQSVRVVVRP
SAEVAEGTEVTLTCRDAGARPGTLYTWYKNGRWLAEGPDASLALPAARRTDAGAYACRAG
RGLRGRRAPPAALRVLYAPQEPSFISLVEPWGGRQAVLLCTVDSFPPSDIALHRGPGRAP
LASTWGPSDPRFTVQVAPNSLRVEIGGLELRDAGLYVCSANNSYGTASSSLHLDVGGVAI
MVEPSPEVPEGTTATMTCSAIPWVGEEANYTWYKNNRWLQEGPDGSIILARVSSADTGSY
RCRASGTRGSTASATLSFNVLYPPRDVSVSTFLENRSGRVGIVLCTADSHPASTIALYRR
GQLLASSLAPATTPGVRVSPSHNTLRLELGAVGPEDSGEYTCVAGNPLGNATAGAYFDAH
TLTHLLAFTILAGLLMAVVCVAALALLAVKLWPRMRKFWDWSSAEDTFELRSKQEQAQVD
GAS
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgccctggtggctcgttctcctggccagccttgtcccaccagccctgggctcc
tggggggtcacctaccccgaggccctgcagggcgtcaggggctcctgcgtggtggttccc
tgcaccctgagctaccccagcaacgtggcggccggcgacggcatcgtggccatctggtac
aaggattatgacacccagaaggcgctggtgtaccactcggcggcccaggaggtggatgct
cgcttcaggggccgtgcccagctcctgggggaccccgccacccacaactgcaccctgctg
ctgcggggggtgacgccggaggacagcgggccctacaggttccgcttcgagatcgtcaac
ggcgaccggtggtcggcggcgcgggatgtgatgctgagcgtttcggacgccctcgagcac
ccgagcactgccaccagcgaggagcagaccgaggggcaaacatccaccttggagtgctcc
acaccctacgtctgcccgccgggcgacgtcgcactgcgctgggagggctacaacccccag
gtctccactctgtctggacgggtccagctggacacaagcggggtcggccagcacctgacc
ctcaccacctccttctcctggaaggaccactccaaaaagctgctctgcgaagtttcttac
ggctccaggaaggcgaccggggaggtcgtcctgcgggtgagacacacccctaaggacatc
caggtgtcggtcaacccctccacacagaacatccgcatgggtgacacggtgtccctcacc
tgcgaggtgagcagcagctacccccctgtctcagcataccactggtacaaggacggggtg
gtcatgggcagcgagcagatcctgaccctccggggtgttcgccgggaggactacgggcag
taccactgcaaagccgagaacgctgtcggggctggcgtggcacctgccgtgacgctctac
gtcttctctgcagagatctcggtgagccctgcagctgaggtgcaggaggggacggccacc
accttgtcctgcgacgtccctggcagggagggccaggacctcaactacacctggtacaag
aacaatgcctggctcaaggagggcacggtgcacaccctgcttttccaccgcgtagccgcc
agcgacgccggctactactcctgcaaggtgatgaacgaccggggcagcgacacgtcccag
gccatcagcctgagcgtcacataccccccccggaaccccaccatcaccctctttcaggag
acacaggggggcaggctggccatcatccgctgcgctgtggacagccaccccccggccacc
atcgccctttaccgtgacgacaccttggtggcggccagtgggtcacaggcagccccccac
cagcggctgggtgtcaccacctcccgcaatgccctgcggctggagatccgcgacgtgggg
ccgcaggacagcgggtcgtaccgctgcgtggccaccaacgcctacggcaacgccagtgcc
accaagcccttcgttgcccgcgctacagagatcctgatccagccctcggcggaggtgcgg
gaaggggcagctgtcaccctgacctgcctgggggctcggggcgcggcggcggaggagacc
ctctacacctggtacaggaacagcaggtggctgcgggagagctcggccccgacgctgcgc
ttcccctccatccgcggcgaggacgcgggcgctttccagtgcagggtccggagcagcaat
ggcagcgacaagtcagcagctgtcccgctccgtgtgctcttcccaccgaggcgaccggtg
atgagctccttcctggagacccacagcgggcacctgggcatcatccagtgcaccgttgag
agtgacccagaggccaacctgaccctatggagagaaggagaagtgatagcctgcacacgg
ggctgccccacagcccccaaccccagggtccgcgccaccttgtcctacaacagcctgaag
gtggagatccaggatgtggtgctggaggacgaggggacctacgtgtgctgggctgggaac
ccgcaaggcaatgccagcgcggccatggacttcagggctgagactgccagcatcacagtg
tctccatcctcccacgtgctggaaggtcatgccgccaacctgacctgccggctgagcagc
gactccctggctctgcccaacttcacctggtaccggaacggccggtggctcgccgggggc
tcggccacctccctggtgtttcggcaagtggccagcacggatgcgggcctctaccactgc
agagccaccaccgacggcagcagccggagctcccccgctgtctccctagatgtgctgtat
cccccaagggatcccgacctgacggcattcctggagacggagagaggccgcctggccatc
ttccagtgctcggtggtgagcaaccctcccgcccggctggccctgcacctgggcgaggag
ctggtggccgccagtgatgcggggagcagccccagcccgcgggtcgctgcctcggccacc
cccaacaccctccgggtggagatccgggaggtgacgccggcggacgagggcagctaccgc
tgcactgccaccaacgcgcacggcaccgcgtcccgccacctgtacttccgtgtgcagact
gcccgagtcctcgtctcaccgtccacggaggtgcgggagggagacgatgtctccctgaca
tgccaagtggtgggagagccgcaggacgacaccgtctactcctggtacaagaacagcgaa
cggctccaggagagccccgacaacttcctcgcgttgccccacatcgccagtgccgccgcc
ggctcctaccactgccgagcccacagcccctcggggaccagcatctccccggccgtcgcc
ctgcgcatctcctatcctccgcgggcaccggtgctgacctccttcctggagacccccgag
gggcagcggggcgtcctgcagtgcgcggttgacagcaacccacgggcagagctgtcactt
ttcaaggaccaggcgttggtggcctccacggcgctgccccagcccaccgccccaccgcgg
ctcagcgtcgccttggccttcaacatgctgcgggtcagcatccaccccgtgctgctggag
gacgagggggagtacctgtgctccgccagcaacgcctatggcaacgccagcgccacggtg
aacttcactgctggcactgccagggtctggatctccccctccccagacatccgggagggc
aacgccgtcaacctgacgtgtgcggtggagactggcagccgggaagtgctgagctacacc
tggtacaagaacaaggtctggttccgcagcagctcgtccccggccctcatcttccccagc
gtcgctgccgctgacgccgcctcctaccactgcacggtgcagaccccggcacggacccgc
agctctgcccccaccaccctcaatgtcctctatccccccaggaacctgcagatgaaggcc
tttgtggagagtggcgaggggatggcggtcatcctcctctgcaccgtggagagcaatccc
ctgtccgagatcaccctgctcaaggaggggcagccggtggcctccagcctcccggtggga
ggtgaccaccccaggcagagcagccgcatctccccggctcccaacacgctgaggctggag
ctccgggaggcctccgaggaggacgagggcgagtacgagtgctgggcacacagcctcctc
ggcagcacccaagcgtccctgcccctccgtgtgcagtccgtccgggtggtggtgcgaccc
tctgccgaggtggccgaggggaccgaggtgacgctgacctgccgggacgcgggtgcccgc
ccgggcaccctctacacctggtacaagaacgggcggtggctggcggaggggccggacgcc
tccctcgccctccccgctgcccgccgcacggatgcgggagcctacgcctgccgggcgggg
agggggctgcgcggccgccgggccccccccgccgccctgcgggtgctctatgcaccccag
gagccttccttcatctccctggtggagccctgggggggccggcaggccgtcctgctctgc
accgtcgacagcttcccgccctccgacatcgccctgcaccggggtcccggccgcgcaccc
ctggcctccacatggggcccgtccgacccacgcttcaccgtccaggtggcccccaactcc
ctgcgggtggagataggggggctggagctgcgggacgcggggctctacgtctgctcggcc
aacaacagctacggcactgcgtcctcgtccctgcacctggacgtgggaggggttgcaatc
atggttgagccctctccagaagtccccgaaggcaccacagccaccatgacctgctcagcc
atcccttgggtgggggaagaggccaactacacctggtacaagaacaaccggtggctgcag
gagggaccggacggctccatcatccttgcccgtgtctccagcgctgacaccggctcctac
cgctgccgggcgagcgggacgaggggcagcaccgcctcggccaccctcagcttcaacgtg
ctctaccccccccgggacgtgtccgtcagcaccttcctggagaaccgcagcgggcgagtg
ggcatcgtgctgtgcacggccgacagccacccggcttccaccatcgccctgtaccgccgt
ggccagctcctggcctccagcttggccccagccaccacaccgggagtccgcgtctccccc
tcccacaacaccctccggttggagctgggggctgtggggccggaggactcgggggagtac
acctgtgtggccggcaaccccctgggcaacgccacagccggtgcctactttgacgcgcac
actctcacccacctcctggccttcaccatcctggccgggctgctcatggctgtggtctgc
gtggccgccctggccctcctggctgtgaagctgtggcccaggatgagaaaattttgggac
tggtccagtgctgaggacaccttcgagctgaggagcaaacaggagcaggcgcaggtggat
ggagcttcttaa
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integrated database retrieval system
