Rissa tridactyla (black-legged kittiwake): 128910545
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Entry
128910545 CDS
T09443
Symbol
CD47
Name
(RefSeq) leukocyte surface antigen CD47 isoform X1
KO
K06266
CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04148
Efferocytosis
rtd04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128910545 (CD47)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128910545 (CD47)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtd02000
]
128910545 (CD47)
04515 Cell adhesion molecules [BR:
rtd04515
]
128910545 (CD47)
04090 CD molecules [BR:
rtd04090
]
128910545 (CD47)
Transporters [BR:
rtd02000
]
Other transporters
Pores ion channels [TC:
1
]
128910545 (CD47)
Cell adhesion molecules [BR:
rtd04515
]
Immunoglobulin superfamily
Other
128910545 (CD47)
CD molecules [BR:
rtd04090
]
Proteins
128910545 (CD47)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CD47
V-set_CD47
Ig_3
Ig_2
V-set
I-set
Oxidored_q4
Motif
Other DBs
NCBI-GeneID:
128910545
NCBI-ProteinID:
XP_054059893
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All DBs
Position
1:122948103..122972795
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AA seq
334 aa
AA seq
DB search
MWQLAAWVLLSAVGVGSAQLMFNVTDVVQKTNCNKTVILPCHVINLNENNPDVMFVTWKR
QGKTIFSFDGGRKEFFRDSTVPSANLVSLVDLPKGIASLRLNSEEADVGNYSCEVTESNR
EGETRVELRKYSVVSCGEESTPTPKEKCGSWFLLVERAIIIALLFVIVALCLAQLILVAL
KYEIGPEKRMGVIVAAVFSIVVAVVGTVLFVQDGYTAQNQTGLGLIVVPAVIFVPLQYFM
FGIVFGSLPQATFALIGLQILGYVIAVVGFALCVSACPPIHGSVVVAGLAILAIANLLSL
GYVFIMGPRMKDHPRPGKAVEEPLNELQSYVIRE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagctggccgcttgggtgctgctcagcgccgtgggcgtcggttctgcccagttg
atgtttaatgtgacagatgttgttcagaaaactaactgtaataaaactgtgattttacct
tgccatgtgattaatctaaatgagaacaatccagatgtcatgtttgtcacgtggaagaga
caaggaaaaacaattttctcttttgatggaggaagaaaggagtttttcagagattcaact
gttccatcagctaacttagtatctctggtggatttacccaagggtattgcctctctaagg
cttaacagtgaagaagcagatgttggaaattacagttgtgaagtaacggaatcaaacaga
gaaggagaaacaagagttgaacttagaaaatactcagtcgtcagttgcggcgaggaaagt
accccaacaccaaaggaaaaatgtggatcatggtttcttctagtggaaagggctatcatc
atagcgttgctgtttgtaattgttgctttgtgtttggctcagttaattcttgttgcatta
aaatatgaaattggacctgagaagagaatgggcgttattgtagcagctgtcttctccata
gttgttgctgttgtaggcactgttctttttgtccaagatggctatactgcacagaatcaa
actggccttggcctaattgtagtccctgctgtgattttcgtaccgcttcaatactttatg
tttggaatagtgttcggtagtctaccacaagcaacatttgctctgataggtctgcaaatt
cttggttatgtaattgctgtggttggttttgctttgtgtgtctcagcttgtcctccgata
catgggtctgttgtcgttgctggcttagctattctggctattgcaaatttgcttagtctg
ggttacgtgtttattatgggtcccagaatgaaagatcatcctcgtccagggaaagctgta
gaagaaccactaaatgaactgcagagttatgtgatacgtgaatag
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