Rissa tridactyla (black-legged kittiwake): 128910550
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Entry
128910550 CDS
T09443
Symbol
AFF1
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
KO
K15184
AF4/FMR2 family member 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtd03021
]
128910550 (AFF1)
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
128910550 (AFF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
BRD4_CDT
Motif
Other DBs
NCBI-GeneID:
128910550
NCBI-ProteinID:
XP_054059900
LinkDB
All DBs
Position
5:63718121..63814696
Genome browser
AA seq
1216 aa
AA seq
DB search
MIPSLLTGSILYNEDRNLLRIREKERRNQEALQDKDKFPEKTPLFAEPYKTNKEDELSSR
IQNMLGNYEEVKELISNKSHQNLIGIPKSVPPLIPQGKPDRPYFPEKSSHTLPSSFHRTT
CHPPMVPTVVAPPPASHSIHYQKAQSRTEPASGLHTKSHSLSSGWSHGQEHSRGGQESHI
GFHHKRNDRRAVGEGRANELQASLLALSPLLSSLSSPVTPLSPLHSSQRVNSRSQNSSRS
HGVTYSQTKSSQDLVTGSQEKESRDSSAINLTSTTQPSSQTFPPPLPSKNSAMQQKPTAY
VRPMDGQDQAPVESPELKPLLEEYHGEPYEKISDLKATAKAKLSKLEIPSEPIEQTFPSD
VHSIEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPTKESQHVGSVAQNQKQYDAPSKTL
PSSQPRTSMLQDDLQLSDSEESGDDQVVEKPPPSLAPPSALQSQPKSVASAHSSSPESGS
TSDSDSSSDSETESNSSDSEANEPPRASAPEPDPPTSNKWQLDNWLTKVNPPAVPTESLS
EITHGDGCEEGKEQGQGISSNSSHQHAEPREPHHKSSGRVARAPQDTHLLTKHTCQKSPV
HAEEHLPRQTVGIKKPSKALVHEGPKGGLKVESDTGPFEVRDQASRDKPKVKTKGKPKSS
DRKDLKPALQEPPENRKHKSSQQANAKPFLDPKLMRDILLGSAQEHLALSPLPQGQGTTP
TRTGGHRPAVMGREDFHKEKLPLPIREKKLLSPVTDFPTPQSLMVKIDLPLLSRVPQPPG
KGSHQKRAEAKELPGERKKDLERKTTDTPDKSLQKRKREVEKEIDRKKMKSEKETKSLQS
SANKDSNKLKASKTSSEIQKKDLLLPLPLTPVSSAHPAPKSTRVAQKRPRSEAGELPTMD
NNARNRSNHKDPLFPKHKKGERNHAELSKGIKGSVGDVTNPFPVPSLPNGTSKSSRPQLN
FEKHHPMEYYIEEAKRLKHKADAMTDKTEKAFQYLDATLSFIEYGIALESDVPAPKPAYS
IFSDTIDLIKFIMTLKSFTDSSASSREKIFAVLCMRCQSILHMAMFRYKKDTAVKYSRIL
NDHFKSSSRVTQAPSPCVARSTGMPSPLSPMPSPAGSVSSQLGSNASNCSGNNVGSSVTV
PYNIPSITSSYVNITSYILYACDIWEQADALAGKNKEFFAELGTATCALALNSSMTELVH
YTRQGLQWLRLETNTP
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgatacccagtttgttaactggatccatcttgtacaacgaggatagaaacttgctgcgt
attcgagagaaagagaggcggaatcaggaggctctgcaggacaaagacaagttccccgag
aagactcccctctttgcagaaccctacaagactaataaagaagatgagttgtcaagccga
attcagaacatgctgggcaattatgaggaggtcaaggagctcatcagcaacaaatcccat
cagaatctcatagggattccaaaaagtgttcctcctctgatcccacaaggaaagcctgac
cgcccatacttccctgaaaaaagcagccatactttaccgtcatcattccaccgcacaacc
tgtcatccacccatggtacctacagttgtagctcctccccctgcaagccactccatacac
taccaaaaggcacagtcaagaacagaaccagcttctggtttgcacaccaagagtcacagc
ttatccagtggttggagccatggtcaagaacacagtcgtggtggtcaggaaagtcacata
ggttttcaccacaagagaaatgataggcgtgcagttggtgaaggtcgtgctaatgaactt
caggcctcccttttggcactttctccattgctgtcatctttgtcttctccagtgacgccc
ctgtcacctctacattccagccagcgtgtcaattccaggtcacagaatagtagcagaagt
catggagtgacttacagtcaaacaaaatcatctcaggacctagtgacaggatcacaggag
aaggaaagtcgggacagctcagccattaacctgaccagcaccacccagccttcatctcag
acttttcccccacctttgccatcaaaaaacagcgcaatgcagcagaaaccaactgcctat
gtcagaccaatggatggccaagatcaagcaccagttgaatcaccggagctcaaacctctc
ctagaggaataccacggagaaccctatgaaaaaatctcagatctgaaggcgactgccaaa
gccaagctatccaaattggaaatcccttctgagcctatagagcaaaccttccccagtgac
gttcactccattgaagaaattttgaaggaaatgacccactcatggccacctcccctgaca
gctattcatacgcctagtacagcggagccttccaaatttccgttcccaacaaaggagtca
cagcatgttggatctgtagcacagaatcagaaacagtatgatgcaccttccaaaaccttg
cctagttctcaaccaagaacatcaatgctccaggacgacctgcagctcagtgatagtgaa
gagagtggtgacgaccaagttgttgaaaagccacctccttcacttgcacctccaagtgcc
ctccagtcccagcccaagagtgtggcatcagcacattccagcagcccagagtcagggagc
accagtgactcagacagttcttcggactcggagacggagagcaactcgagtgacagtgaa
gcaaacgagcctccgagagcatcagcgcctgagcctgacccaccaacttctaataagtgg
cagctcgacaactggctgaccaaggtgaacccaccagcagtgccaacagaaagcctcagc
gaaatcactcatggggatggatgcgaggagggcaaggagcaggggcagggcatcagcagc
aattcctcccaccagcatgctgagccgagggagcctcatcacaagagctctggacgagtg
gccagggctcctcaggacactcatcttttgacgaaacacacttgccagaagtctcctgtg
cacgccgaggagcacttgcccaggcagactgtgggtatcaaaaagcccagcaaggccctg
gtacatgaggggcccaagggaggcctgaaggtggagagtgacactggtccctttgaggtc
agagaccaggcttccagagacaagccaaaagtcaaaacgaaagggaagccaaaatccagt
gacagaaaagacctgaagccggcactgcaagagccccctgagaacagaaagcacaagagc
tcccaacaggccaatgccaaacccttcttggaccccaagctcatgagagacattttgctt
ggcagtgcccaggagcatctcgctctcagtccccttcctcaaggccagggcacaaccccc
accaggactggtggccacagacctgctgtcatgggcagagaggattttcacaaggagaaa
cttcccttgcctatcagggagaagaagttgctctcaccagtgacagacttccccaccccc
cagtccctcatggtgaaaatagaccttcctctcttgtcaagagtcccccagccccctgga
aaaggcagtcaccagaagagagcagaggccaaggaactccctggtgaaaggaaaaaggac
ttggagaggaaaaccacagatactcccgacaagtcccttcaaaagaggaagagggaagtg
gagaaggagattgataggaagaaaatgaaatcagaaaaagaaacaaaatcattgcagtct
tcagctaacaaagactccaataaattgaaagcatcaaaaacttcatctgaaattcagaag
aaagatctcctgctccccctgcctctgacacctgtgtcttctgcacatcctgcaccaaag
tcaaccagggtggcccaaaagagacctagaagtgaggccggtgagctgcctaccatggat
aacaatgccaggaacaggagcaaccacaaggatcctttgttccccaagcacaagaagggg
gagagaaatcacgctgaactgtcaaagggcatcaaaggatctgtaggggatgtcacaaat
cctttcccagtgccttctttgccaaatggtacctccaagtcaagtagacctcagctcaac
tttgaaaaacaccatccaatggaatactacatagaagaagccaagaggctgaagcacaaa
gctgatgcgatgaccgacaagactgaaaaggcctttcagtacctagatgccaccctttcc
ttcattgaatatgggattgccttggaatcagatgtaccagcaccaaaaccagcctacagc
atattcagcgacaccatagatctcatcaaattcatcatgacattgaaatcctttacggac
tcatcagcatcttcacgtgaaaaaatctttgccgtgttatgcatgcgctgccagtccatt
ctgcacatggcaatgtttcgttacaaaaaagatactgcagtcaagtattccaggattctg
aatgaccactttaagagttcttccagagtaacacaagcaccttctccgtgtgttgcaaga
agcacaggcatgccttctcctctttctccaatgccctctcctgctggttctgtgagttct
cagctgggatcgaatgctagcaactgcagcggcaacaacgttggctcttcagtcactgtt
ccctataatatcccaagcatcacctcttcctacgtcaacatcacttcctatatcctctat
gcgtgtgatatttgggaacaggctgatgcactggctgggaagaataaggagttttttgct
gaactcggcacagcgacgtgtgctctggcactgaacagtagcatgaccgaactggtacac
tacactagacagggtttacagtggctgagactggaaacaaatacgccttaa
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