Rissa tridactyla (black-legged kittiwake): 128910689
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Entry
128910689 CDS
T09443
Symbol
CNGA1
Name
(RefSeq) LOW QUALITY PROTEIN: cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
128910689 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtd04040
]
128910689 (CNGA1)
Ion channels [BR:
rtd04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
128910689 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
CDC45
Tim54
Connexin
Menin
Zip
ADI
Ribosomal_S2
Sec62
NPR3
SLC52_ribofla_tr
Motif
Other DBs
NCBI-GeneID:
128910689
NCBI-ProteinID:
XP_054060212
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Position
5:13126212..13130812
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AA seq
647 aa
AA seq
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MKVGVIETHHSHTIVPSVVVQDTSEDPGPMNKGENRYARQRYLPGAFARYNINNNSNKDE
XKKKKKEKKSKSEKKKDGETQKNKEKKEKNKNKDKSKKKEDKEEKKKDIFIIDPAGNMYY
NWLFCITMPVMYNWTMIIARACFEELQHDYLVAWFIIDYVSDAIYIADMFVRTRTGYLEQ
GLLVKEEQKLREKYKTSFQFKLDFLSVIPTDLLYFKLGLNYPELRINRLLRVARMFEFFQ
RTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYPNTSDPEFARLT
RKYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVVDFLVGVLIFATIVGNVGSMISNMNAA
RAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIA
INVHLETLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKEGKLAV
VADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMEALT
EYPDAKAMLEEKGKQILMKDGLLDIEVANLGSDPKDLEEKVSYMEGAMDRLQTKFARLLA
EYEAAQQKLKKRLTQIEKILKPIIQEEFADLEGGDPSTDKPGESKAE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaggagtgattgagacccatcactcccacacaattgttcccagtgtggtagta
caagacaccagtgaggaccctggaccgatgaacaaaggggaaaacaggtatgctaggcaa
cggtatctacctggtgcgtttgcacgctacaatattaacaacaatagtaataaagacgag
taaaagaaaaagaaaaaagaaaagaagagcaagtcagaaaaaaaaaaggatggagaaaca
caaaagaacaaggaaaaaaaggagaaaaataaaaacaaagataagtccaagaagaaagaa
gataaagaagagaagaaaaaagatattttcattattgatccagcaggaaatatgtattac
aactggttgttctgcatcacaatgcctgtcatgtacaactggaccatgattattgctaga
gcctgttttgaagagcttcagcatgactacttagtggcatggtttattattgattacgtt
tctgatgccatctatattgctgacatgtttgtacggacaagaacaggttacctggagcaa
ggtcttctggtgaaagaagaacaaaagcttcgagagaaatataagacatcttttcaattc
aaattagattttctgtcagtcataccaactgatctcttatactttaagttaggactaaat
tacccagaattaagaataaacagactactcagagtagctcggatgtttgaattcttccag
cgaacagaaacaaggacaaactacccaaacatcttcaggatctctaaccttgtcatgtac
attgtgattattattcactggaacgcctgtgtgtactactcgatctcaaaagccattggg
tttggggctgacacgtgggtctaccccaacacctccgatcccgaatttgcccgtctgact
agaaagtatgtctacagtctctactggtcaacgctgaccctgactactatcggtgaaaca
ccccctcctgtaagagattctgagtatttcttcgtggtcgttgacttcttggttggagta
ttgattttcgctaccattgttggtaacgtgggctctatgatctccaacatgaatgctgcc
agggcagagtttcaagcaaggattgatgctatcaagcagtatatgcactttcggaatgtg
agtaaagacatggagaaaagagttataaagtggtttgactacctgtggacaaataaaaag
gctgtggatgaaagggaagtcttgaagtatctgccagataaactaagagcagagattgca
atcaatgttcacctggaaacactaaaaaaagttcgtatctttgcagactgtgaagctggt
ctgttggttgaactggttttgaaactccagccgcaagtatacagtcctggagattatatt
tgcagaaaaggagatattggacgagagatgtacattatcaaagaagggaagctggcagta
gttgctgatgatggaattacccaatttgtggtgttaagtgacggcagctattttggagaa
atcagcattcttaatatcaaaggtagcaaagctggcaatcgaagaacagccaatatcaga
agtattggatactcggacttgttttgtctgtctaaagatgatctcatggaggctttaaca
gagtatccagatgcaaaggctatgctggaagagaaaggtaagcaaatcctaatgaaagat
gggttgctggacattgaagttgcaaatttaggaagcgatcctaaagatctggaagagaag
gtcagctacatggaaggagcaatggacagattacaaacaaagtttgccaggctgctggcc
gagtacgaagctgcacaacagaaactgaaaaaaagactaacacaaatcgagaaaatattg
aagcccattatacaggaagaattcgcagacttagaaggaggagatccatccacagataaa
cctggagagtcaaaagcggaataa
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