Rissa tridactyla (black-legged kittiwake): 128910854
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Entry
128910854 CDS
T09443
Symbol
RNF13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128910854 (RNF13)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128910854 (RNF13)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128910854 (RNF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
Neur_chan_memb
Prok-RING_4
FeoB_associated
DUF7027
zf-RING_16
SID-1_RNA_chan
zf-RING_4
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
128910854
NCBI-ProteinID:
XP_054060710
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All DBs
Position
6:31182722..31227599
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AA seq
381 aa
AA seq
DB search
MLLSIGMLMLSATQIYTILTVQLFAFLNLLPVEADILAYNLENGTQTFDDLPARFGYRLP
AEGLKGFLINSKPENACEPIAPPPLRDNSSGAFIVLIRRLECNFDIKVLNAQRAGYKAAI
VHNVDSDDLISMGSNDIEILKKIDIPSVFIGETSANSLKEEFTYEKGGHVVLIPEFSLPL
EYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKIPVHKFKKGDEYDVC
AICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSETDSSQ
EENEVSENTPLLRPLASVSTQSFGALSESHSHQNMTESSEYEEDDNDNIDSSDAENGINE
ESVVVQLQPNDEREYRVANTV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgtcaataggaatgctgatgttgtctgccactcaaatatacactattttgact
gttcagttatttgctttcctgaatctcttgcctgtggaggcagatattttagcatataac
cttgaaaatggaactcagacctttgatgatctacctgctagatttggctacagactgcca
gcagaaggcttgaagggattcctaataaattcaaaaccagagaatgcatgtgagcctata
gccccacctccactgagagacaactcgtctggtgcttttattgtgttaattcgaaggctt
gagtgcaactttgatatcaaggttttaaatgcacagagagctggatataaggcagctata
gttcacaatgttgattctgatgacctcataagcatgggatccaacgacattgagatttta
aagaagattgacattccgtctgtctttattggtgagacttcagctaattctcttaaagaa
gaatttacttacgaaaaggggggccatgttgtgttaatcccagagttcagtcttcctttg
gagtactacttaattcctttcctaataatagtagggatctgtcttattctcatcgtcata
tttatgatcacaaaattcgtgcaagacagacacagagcaagaaggaatcgtcttaggaag
gatcagcttaagaaaattcctgtacataaatttaagaaaggagatgaatacgatgtatgt
gccatttgtctggatgaatatgaggatggcgacaagctcagaatccttccatgttctcac
gcgtatcactgcaagtgtgtggacccgtggctgacaaaaacaaaaaaaacatgtcctgta
tgtaagcagaaagtggtcccttctcagggggactctgactctgaaacagacagtagtcaa
gaagagaacgaagtatctgaaaacacccctctgcttagaccattagcctcagttagcact
cagtcgttcggggctttgtcagaatctcattcccatcagaacatgaccgaatcctcagaa
tatgaggaggatgacaatgacaatatcgatagcagtgatgcagaaaatggaataaacgaa
gaaagtgtagtggttcaactacagcccaatgacgaaagggagtacagagtggcaaatact
gtttga
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