Rissa tridactyla (black-legged kittiwake): 128910902
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Entry
128910902 CDS
T09443
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
128910902 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128910902 (ERCC6)
03400 DNA repair and recombination proteins [BR:
rtd03400
]
128910902 (ERCC6)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
128910902 (ERCC6)
DNA repair and recombination proteins [BR:
rtd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
128910902 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
128910902
NCBI-ProteinID:
XP_054060850
LinkDB
All DBs
Position
6:complement(53371316..53420773)
Genome browser
AA seq
1498 aa
AA seq
DB search
MPTDNSHLPDSIQEQDPVATSSNNGQHNVEELGTEQENSTCDSDLDNSIGVPNSASQPST
SAAVPLEVPRRGQPLLQINRQQIQSISYSAQAAELKGLGVDVYDQDVLEQGVLQQVDNAI
NEANKATKIADAEKEYQSVLDDIRSCTTSLKQINKIIEQLSPQAAENKDINRKLDSVKRQ
KYNKEQQLKKIKAKQKRLQAILGGTEILDKVNEIEFEEDEEPGPSCLGSMLMPVQETEWD
ELIRTGQMTPFGTKIPQKPERKTRRLMLNEASDFEKYLADQDKLLSERKKLSLHKGAKKK
VQAKNVKSKAPASTTKEKKGKALSKTDKRLKKHLRRLQKHALQIQSKAEIPREKKYLEAK
KFKREQEDDSGESEYVPDEELFDPEAVEEEEEQASPHAENDSDYELRNLSRKKKYLVKRD
FKEAEDDADFFPSSDEEEQTLGKRKVKRWRDDGDEDYYKQRLRRWQKECLKDKEHQTAEE
LSEESDTEFEEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIA
FLAGLSYSKIRTRGSNYRYQGLGPTVIVCPATVMHQWVKELHTWWPPFRVAILHETGSYT
DKKVKLIREIASCHGILITSYSYIRLMQDIIHSYDWHYVILDEGHKIRNPNAAVTLACKQ
FRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV
KTAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQNFINSKE
VYQILNGDMQIFSGLVALRKICNHPDLYSGGPRILKGVPDAEVEEADQFGYWKRSGKMIV
VESLLKIWHKQGHRVLFFTQSRQMLQILEVFVRDRNYSYLRMDGTTTIASRQPLITRYNE
DKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLL
TAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDVSQGTETSAIFA
GTGSDVQVPKHQFKRKLEKTLDNDTSKGDLHLTESSLPKYSKLSNSCSTTHVTDSSKPIE
TSEGTKGNFETFDQNSHAKDNAQAATNVSSLNNSKDESLERADKSMSQSLTGEAGSSENA
KCLNAVVADEVHGADNANVKGDFSLTCGAAGSWEKQVAKTEDGQLDKNHYKCTSKTKHRV
DMLSHESHKDKSKKKHHKDAKFEGERIPHLVKQKRYRKNSEEKEEDSKKNDDYVLEKLFK
KSGVHSVMKHDAIMEASSADHVLVEAEASRVAQDALRALKVSRQRCLGAASGVPTWTGMS
GLSGAPSGIKSRFGQKRNSVLLSSHSTCASPAKKCKDADIMKKENVKKCSSNGHFDVKSG
ESSSSALDSSSLLAKMRARNHLILPQRTGNEGDENHQQAPAPAPVSTEYDELLVDVRNFI
AFQARVDGEASTQELLHEFESKLPVAHSCVFRELLRNLCTFHRSPNGEGVWRLKPEFH
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagacaacagccatctgccagacagtatccaagaacaagaccctgttgctact
tcaagcaataatggccagcataacgttgaggaactgggaactgagcaagaaaatagcacg
tgtgacagtgacctggataatagtattggagttcccaactctgccagccagccatcgact
tccgcggctgttcctttggaggtgcccagaagaggacaaccgcttttacagatcaacagg
cagcagattcagtccatctcatatagtgcacaggctgctgagctcaaaggtctaggagtt
gatgtctatgaccaggatgtattggagcaaggagttcttcagcaagtagataatgcaatt
aatgaagctaataaagccacaaaaatagctgacgcagagaaagaatatcagtcagtgctg
gatgacataagatcatgtacaacatctctgaaacaaataaacaaaattattgaacaactt
tcacctcaggctgccgaaaacaaagatataaacagaaaactagattctgtaaaacggcaa
aaatataacaaggagcaacagctaaagaagatcaaagcaaaacaaaagcgtctccaagca
attcttggtggaacagagattcttgataaagtaaatgagattgaatttgaggaggatgaa
gaacctggtccatcatgtcttgggagtatgcttatgcctgttcaggaaacagagtgggat
gagcttattcgtactggccagatgactccatttggaactaaaatacctcagaagccagag
aggaagacacgacgattaatgctaaatgaagcatctgattttgagaagtacttagccgac
caagataagctgttatctgaaagaaagaagttatcgcttcacaaaggagcaaaaaagaaa
gtgcaagccaaaaatgttaagagcaaagctcctgcgtctactacaaaggaaaaaaagggt
aaagccctgtcaaaaacagataagcggttaaaaaaacacctgagaagacttcagaagcat
gccctccagatacagtcaaaggcagagattccaagagaaaagaaatatcttgaggccaag
aagttcaagcgtgaacaggaagatgacagtggagagtctgagtatgtacctgatgaggag
ctctttgatccagaagcagtagaagaggaggaagagcaggcatctcctcatgctgagaat
gattctgattatgaactcaggaatttgtcaagaaaaaaaaaatacttggtgaagagagat
tttaaagaagctgaagatgatgctgacttctttccaagctctgacgaagaagagcagaca
ctggggaagcgcaaagtgaagagatggcgagatgatggagacgaagactattataagcag
agactaaggaggtggcaaaaagaatgtttgaaggacaaagaacatcaaacagctgaagaa
ctttctgaagaaagtgacactgaatttgaagagggtttcaaagtaccaggatttctcttc
aaaaagctatttaagtaccagcagacaggtgttaggtggctctgggaattgcactgccag
caggcaggaggaattctgggagatgagatgggattgggcaagaccatccagataattgcc
ttcttggcaggtctgagctacagcaagatcaggactcgtggttcaaattacaggtaccag
ggattgggtccaacagtgattgtttgtccggctactgtgatgcatcagtgggtaaaagaa
ctccacacttggtggcctccatttagagtcgccattctacatgaaactggttcttatacc
gacaaaaaggtgaaactaattcgtgaaattgcttcatgccatggaattttaattacgtct
tactcatacattcgactgatgcaggatatcatccacagctatgactggcattatgtgatt
ctggatgagggtcacaaaatccgaaatccaaatgccgcagtcacacttgcatgcaagcag
ttccgcacacctcatcggatcatcttgtctggctcccctatgcaaaataacctaaaggag
ctctggtccctctttgactttgtattcccagggaaactgggaacactacccgtgttcatg
gagcaattttctgttccaataaccatgggaggatattccaatgcctctcctgtgcaggta
aaaactgcatacaaatgtgcctgtgtgttacgggacaccataaacccctacttgctgcga
agaatgaaggctgatgtaaaaatgagcctttcccttccggataaaaatgaacaggtcctc
ttttgccgtttgacagatgagcagcgtcaagtctatcaaaatttcatcaactctaaagaa
gtttaccagattctcaatggagacatgcagattttctcgggactagtagctttgagaaag
atttgcaatcaccctgacctctactctggtggtcccaggattttgaagggtgtaccggat
gctgaagtggaggaagcagatcaatttggatattggaaacgttctggaaaaatgatagta
gtagaatccttgctgaaaatatggcacaagcaaggtcacagagtgttgttctttactcag
tcaagacagatgctgcagatacttgaagtctttgtgagagacagaaactattcctacctc
aggatggatggcaccacaacaatagcttccagacagccccttataacaagatataatgag
gacaaatccatatttatttttcttctaacaactcgtgttggtggcattggggttaacttg
actggtgctgaccgggttattatttatgatcctgactggaatcccagtacagacacacag
gctcgggaacgtgcttggagaataggccaaaagaaacaggtgactgtgtataggcttctc
actgcaggtactattgaagagaagatataccacagacaaatattcaaacagtttttaaca
aatagagtgctgaaagaccctaagcagaggcgctttttcaaatccaatgacctttatgaa
ctctttactctgagcagcccagatgtatctcaggggacagaaacaagtgcaatctttgca
ggtactggttcagatgttcaagtcccaaaacaccaatttaaacggaaacttgaaaagaca
ctggataatgacacttctaagggtgatctccatcttacagaaagcagcttgccaaagtac
agcaagctatccaattcctgctcaaccacccacgtgacagattcttctaaaccaatagag
acaagtgagggaaccaaaggaaattttgaaacctttgaccaaaatagccatgcaaaagat
aatgcacaagcagctactaatgtaagttcgttgaataatagcaaggacgaaagcttggaa
agagctgacaaatctatgtcccagtcattgacaggtgaggcagggtcttcagagaatgcc
aaatgtctcaacgccgtggtggctgatgaagtacatggagcagataatgcaaatgtcaag
ggagattttagccttacatgtggtgcagctggctcttgggaaaagcaggttgctaaaact
gaagatgggcaactagataagaatcattataaatgtacctcaaaaacaaagcacagggtg
gatatgctgtcacatgaaagccacaaagataagtctaaaaagaaacatcacaaagatgcc
aaatttgaaggagagcgcattcctcatctagtgaaacagaagcgatacagaaagaacagt
gaagagaaggaggaagactcaaagaaaaatgatgattacgtcttggagaaacttttcaaa
aaatcaggggtacacagtgttatgaagcatgatgccattatggaagcttccagtgcagat
catgtgctggtggaagcagaagcaagcagagtggcccaggatgccttaagagccttaaaa
gtctctcgacagcgatgtttaggagctgcttctggtgtgccgacctggacaggcatgagc
ggtctttcaggtgcaccatcaggaataaagagtcggtttggtcaaaaaagaaactccgtg
ctgctttcttcacattccacttgtgcatcacctgcgaaaaagtgcaaggatgcagatata
atgaagaaagaaaatgtgaagaagtgtagttccaatgggcattttgatgtaaaatctgga
gaatcgtcatccagtgcactagactcttcatctttattagctaagatgagggcaagaaac
caccttattttaccacaacggacagggaatgagggagatgagaatcatcagcaagcaccc
gcccccgccccggtttcaacagaatacgatgagctgctcgtggatgtgcgtaacttcata
gcgttccaggcccgcgtggacggcgaggctagcactcaggaactactgcacgagtttgag
tccaaactgcctgtggcacattcctgcgtctttagagaacttctccgcaatctctgcacc
ttccacaggagcccgaacggtgaaggtgtctggaggctaaagccagaattccactga
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integrated database retrieval system
