Rissa tridactyla (black-legged kittiwake): 128911009
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Entry
128911009 CDS
T09443
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtd03009
]
128911009
03036 Chromosome and associated proteins [BR:
rtd03036
]
128911009
Enzymes [BR:
rtd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128911009
Ribosome biogenesis [BR:
rtd03009
]
Eukaryotic type
Pre-60S particles
Helicases
128911009
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
128911009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
UTP25_NTPase-like
AAA_22
Motif
Other DBs
NCBI-GeneID:
128911009
NCBI-ProteinID:
XP_054061167
LinkDB
All DBs
Position
6:complement(37271881..37286015)
Genome browser
AA seq
802 aa
AA seq
DB search
MGGVWCRPARLAFPAARAAAVAAAPLSARRRLCWLPGGAGPLLAATAVAVLPRRPVRPPD
APHFLRAGAGRGSWGCRGETSSSSSSAVAQLAGEQPSAMPAAVPADSPAEPQAPAGAESL
RRGRRRKAKEETQEKKVKRRRKAEGEQAQPEESGLGDGDLDPPLPKKTKKIKGKSNGLAG
ESDGSQHTGKPSSAASNGVTSLVGQSVSGEAAAGEQDSDAEELTEEAKEGAFSNFPLSQN
TINLLNARGVKYLFPVQVKTFQPIYDGKDLIAQARTGTGKTYSFVLPLIEKLQSVSQDGR
RGRAPKVLVLVPTRELATQVAKDFKNLTKKLSVACFYGGTPYKEQLDLLKSGIDILVGTP
GRIKDHIQNNKLELSSVKHVVLDEVDHMLDMGFAEQVEEILGFAYKKGSENNPQTLLFSA
TCPRWVYDVAKKYMKDEYEQIDLIGKKTQRTATTVEHLAIQCRSSQRAGVLGDIIQVYSG
SHGRTIVFCETKKEANELAMNASLKQDAQSLHGDIPQKQREITLKGFRNGVFEVLIATNV
AARGLDIPEVDLVIQCSPPKDVDSYIHRSGRTGRAGRTGICICLFQRREEDLLKQVEHKA
GITFKRIGVPSATDVIKASSNDAKKLLEAIPPSAVDYFRKSAQELIDEKGAVAALAAALA
HISGASYIQQRSLLNSSAGFVTMVLKCSIEMRTMSYAWRGLKEQLGEEVDAKVSAMRFLK
GKTGVCFDIPVDELSNIQEQWRDTRRWQLSVAKELPELEEYPQEAGRGFSRFGNGRQGDG
GFKRNSWFKNGNRGHDFNKSLD
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgtgtggtgccggccggcgcgcctcgccttccccgcggcccgggcggcggcg
gtagcggccgccccgctcagcgctcggcggcggctgtgctggctgcccggcggggcgggc
ccgctgctggcggcgacggcggtggcggtgctgccccgccgcccggtccgcccgccggac
gcgccccacttcctgcgcgccggggcggggcgcggctcctggggttgccgcggcgagacc
agcagcagcagcagcagcgccgtcgcccagctcgccggggagcagccgtccgccatgccc
gccgccgtgcctgccgacagccccgccgagccgcaggctccggcgggcgccgagtccctc
cgccgcggtcgccggcggaaggccaaggaggagacccaggagaagaaggtgaagcggcgc
aggaaggccgagggcgagcaggcccaacctgaggagagtgggctgggcgacggtgacctt
gacccccccctgccgaagaagacaaaaaaaatcaaggggaagagcaacggtctggctgga
gagagcgacggctcccagcatacggggaaaccttcctctgctgcaagcaatggcgtgaca
tccctggtgggccagagcgtgtccggtgaggcagcggctggagagcaggacagcgatgca
gaggagctgacagaagaagcaaaagaaggcgccttctccaattttcctctctcacaaaac
accatcaatcttctcaacgctcgaggtgtaaaatacctgttccctgtgcaagtgaagact
tttcaacccatatatgatggcaaagacctaattgctcaagctcgaacaggaaccgggaaa
acctattcttttgttcttccactgattgaaaaacttcagagtgtctcgcaagatgggaga
agaggccgtgcgccaaaggtgctggttcttgttccaaccagggaactggccactcaggta
gccaaagacttcaagaatctcaccaagaaactgtcagtggcttgtttttatggaggaaca
ccgtacaaagaacagcttgatctccttaaaagtggcattgatattctagtgggaacacct
ggacggatcaaagaccacattcagaataacaagctggaactttccagcgtgaagcatgtt
gttttggatgaagttgatcacatgttagacatgggctttgctgaacaagtggaagaaatc
ttaggatttgcttataaaaaaggttctgagaacaacccccagacactgctgttttctgca
acttgtccacgatgggtatacgatgtagcaaaaaaatacatgaaagatgaatacgagcag
attgacctgattggaaagaagactcaaaggactgccacgactgtggaacatttggccata
cagtgtcgctcatctcagagagcaggagttcttggggatatcattcaagtctacagtggc
agccatgggcggaccattgtcttttgtgagaccaagaaggaagcaaatgagctggctatg
aatgcttcgctcaaacaggatgcccagtcattgcatggtgacattccacagaaacagaga
gaaattacattaaaaggctttagaaatggtgtgtttgaagttctgatcgcaacaaatgta
gctgcccgtggtttggatattcctgaggttgaccttgttatacagtgttcaccaccaaaa
gatgttgattcctacatccatcgttctggacgtacgggtcgagctggccggactgggatc
tgcatttgtttatttcagagacgagaagaagatcttctgaaacaagttgagcacaaagcg
gggattacatttaagcgtataggtgttccctctgctacagatgtaattaaagcttcaagt
aacgatgccaaaaagttgttggaggccattcctccttccgcagtagactacttcagaaaa
tctgctcaagagctcatagacgaaaaaggggcggttgctgccctggctgcggctctagcc
catatttctggggcatcttacatacaacagcgctccttactcaactcaagtgcgggcttt
gtgaccatggtgttaaagtgttcaatagaaatgcgtaccatgagctacgcctggagagga
ctaaaagagcagcttggtgaggaagtagatgccaaagtatccgcaatgcgttttctcaag
gggaagacgggggtgtgctttgatatccctgttgacgaactgagtaacatacaggaacag
tggagggacaccaggcgatggcaactgtcggtggcaaaggaattgcctgagctggaagaa
tacccacaggaggcaggacgagggttctccaggttcggaaatggcaggcaaggtgacggc
ggcttcaagagaaacagctggtttaagaatggaaacaggggacatgattttaacaagtca
cttgattag
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