Rissa tridactyla (black-legged kittiwake): 128911089
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Entry
128911089 CDS
T09443
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtd03400
]
128911089
Enzymes [BR:
rtd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
128911089
DNA repair and recombination proteins [BR:
rtd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
128911089
Prokaryotic type
128911089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-GeneID:
128911089
NCBI-ProteinID:
XP_054061323
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Position
6:29929310..29933249
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AA seq
502 aa
AA seq
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MRRGQGKRKAEGTELPPASRRRKEEEEAVQEARRRAAPSVREFKYNKKRVRLVSQGSDLK
DDARCILYWMSRDQRVQDNWAFLYAQRLALKQKLPLHVCFCLVPKFLDATIRHYGFMLKG
LQEVAEECAELNIPFHLLLGYAKDVLPAFVVERGVGGVVTDFCPLRLPRQWVENVRERLP
EDVPFAQVDAHNIVPCWVASPKQEYSARTIRGKIHAQLPEFLTEFPPIIRHPHPPSCPAE
PIAWEACYSSLQVDRTVKEVEWATPGTSAGLAVLQSFITERLKSFGSHRNDPNKAALSNL
SPWFHFGQVSTQRAILEVQKHRGKYKESVDAFIEEAVVRRELAENFCYYNENYDSVQGAY
DWAQTTLKLHAKDKRPFLYKLQELEQGTTHDPLWNAAQLQMVREGKMHGFLRMYWAKKIL
EWTRSPEEALHFAIYLNDRYELDGRDPNGYVGCLWSICGIHDQGWAERAIFGKIRYMNYA
GCKRKFDVDQFERRYAPRTPSQ
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgggggcaagggaagcgaaaggccgagggcacggagctgccacccgcttctcgg
aggaggaaggaggaagaggaggcggtgcaggaggcccggcggagggcggccccgtccgtg
agagagttcaagtacaacaaaaaacgggtccgcctcgtctcgcagggctcggacctgaag
gatgatgctcggtgcatcctttactggatgtcccgggaccagcgggtgcaagataactgg
gctttcctctatgcccagcgcctggccctcaaacagaagctgcctctgcacgtctgcttc
tgcctggtgcccaaattcctggatgctaccatccgccactacggcttcatgctgaagggc
ctgcaggaggtggctgaggagtgtgcggagctgaacatccccttccacttgctgctgggc
tatgccaaggacgtgctgcctgcgtttgtggtggagcgtggtgtgggtggggtggtgaca
gacttctgtccccttcgccttccccggcagtgggtggaaaatgtcagagagcggttacca
gaggatgtgccatttgcacaggttgatgcccacaacatcgtgccctgctgggtcgcctcc
cccaagcaggagtacagcgccaggaccatccggggcaagatccatgctcagctccccgag
ttcctcactgagttccctcccatcattcgtcacccgcatcccccgtcctgcccagcagag
cccatcgcttgggaggcctgttattccagcttgcaggtggaccgcactgtgaaggaggtg
gagtgggcaacccctggcacatctgcagggctggctgtgctgcagtccttcatcacagag
cggctgaaatcctttggctctcaccggaatgaccccaacaaggcagcgctcagcaacctg
tccccgtggttccacttcggccaggtttccacccaacgagccatcctggaggtgcagaag
caccggggcaagtacaaggagtcagtggatgcattcatagaggaagctgtggtgcggcgg
gagctggctgaaaacttttgctactacaatgagaactatgacagcgtgcaaggtgcctat
gactgggcacaaaccactctgaagctccatgccaaagacaagaggccatttctctacaag
ctgcaggagctggagcagggaaccacacacgacccactctggaacgctgcccagctccaa
atggtccgggagggcaagatgcatggcttcctgcggatgtattgggccaagaagatcctg
gagtggacccggtcccccgaggaggccctgcactttgccatctacctcaacgaccgctac
gagctggacgggagggaccccaacggatacgtaggctgcctctggtccatctgtggcata
cacgaccagggctgggcagagcgggccatcttcgggaagatacgctacatgaactacgcc
ggctgcaagcgcaagtttgacgtggaccagttcgagcgtcgctatgccccccgcacgccc
tcccagtga
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