Rissa tridactyla (black-legged kittiwake): 128911160
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Entry
128911160 CDS
T09443
Symbol
WDFY4
Name
(RefSeq) WD repeat- and FYVE domain-containing protein 4 isoform X1
KO
K24777
WD repeat and FYVE domain-containing protein 4
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128911160 (WDFY4)
Membrane trafficking [BR:
rtd04131
]
Autophagy
Other autophagy associated proteins
Others
128911160 (WDFY4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
WD40
PH_BEACH
Arm_4
WD40_CDC20-Fz
NBCH_WD40
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EML
DUF4704
Beta-prop_CAF1B_HIR1
Laminin_G_3
Beta-prop_DCAF12
WDR55
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
EIF3I
Host_attach
Motif
Other DBs
NCBI-GeneID:
128911160
NCBI-ProteinID:
XP_054061486
LinkDB
All DBs
Position
6:53016080..53171984
Genome browser
AA seq
3203 aa
AA seq
DB search
MSHFSMETAAELTWQLEDSPGKAGQQEQSPDDGDKAEVPGQPARSKDKPLQSHTLQWEIL
GRQFVEYEQMAPFLIPEEQQRRLLDFLPLFLKAWEQSAGVIVFPNIQLLASEVSKLLTKE
IKRNLNGKPAEEARLALEQLLQQKGEAEDGRLLLKSVYLLSQTDLRTMCNIIGSGLPAAL
MQCLYLFFTFPLKKTSDDGETSEDDTQTQEMLVKIMLNMYREEQGVEELLAADKLQSLII
ATASLWDQCSHSWKIPTGRVLRTISKAQTKTSIVYLQAVDCIKIAIQNLFKLADTIPACD
VCEAASIVLCFVKDSYPISSALLTEFENNDGYQLLLKIILRCEGLQQNEGDPYLDEILDM
LTCLTTCGKTELKVSGNIVHPQLPHFNFEQTRSSGMTVKNLQAFQVLQSIFMKSNDQHLC
GRILEAIGTIWAWDTVNFFLLEWTLQPINQFTDIIHFKPHPVQVQFFRLVESIVLDLSYV
PHEILKKVQYLIKENTVPFCTLTALRCLLSMTQKDLLFSDIFRDSGLLGLLLALLRKQAK
ILRKSAGTHQPGLEEGTEKELNAVMLKMVAALTVGSVRNTVVLKDYGMVPYIKIFLDDEC
YRSATLSILEQLSVINYEEYMSIIIGALCSSTQGELHLKLDLLKSLLRILESPKSHSAFR
TCSGFNGLLSLLSDMEGALQDPPSGLWAAVGQNCILELVFYTLQGITAALHLDPVNSNFF
QRNGLFEKMAEDLGSLGCFWTQGEWQIPLSLERTRTFGEFLDAAFCSSEPFPMWLKNCIW
ILNFLDHMVKGTLHLESYFKEERKPEMGEASRDDQEGPQAQEEHPVAFKRPGNKLPASAH
RLWGNLEEKWEMGDCAIVHPGAVCVMVRLLPKLYKEGHSQLSQEIQCAVVDHIQSLVKSE
KSRQVMCGSGLLSTIITSCQDAFRNESHPLHLPLTRVFEKLASQAIEPDVLRQFLWLGGS
PPLPSRPSKNKSTALSCDSANTAWNEGSEKDMVDNKTDPQTVVPVSSSPWVSKGSALALQ
TAMSLISMTSPRNFQLRNTALAPSFVEFDMSMEGYGCLYFPTLATVMGPSVEQSVSGGIG
IGTRMFPPSSGLTLSCWFLVSKFGLMHNSHPLRFLTVVRHMSRTEQEFICFSVSFFPQDC
SLVISTEEVEFQPLDIMEPEGEVLNPSPFPGQVQFGCGNLLVTGQWHHLTVTVAKETRKN
CIVSAYINGQMLGSAKMQYFQPLPGSCISMEPSSFIDVYGYIATPRIWKQKSTLTWRLGP
TYLFEEAISVETMEVINKLGPQYCSNFQAVQLQGEDKYNDHNPTPLVSEEKISFGINAVC
SSLTTVQDIKSSYNEVDGRLIAKEIGINSRDSSTPVFLAKNIAGHLSGSLRTIGSVAVGQ
YGVRVFQSSPAATSLNFIGGPAILLGLIAMARDDHTMYAAVKVLNSILNSSPMSEKLMRH
MHGYELLTYLLKRKTQLLNNRILQLMFSLVGTAELGFESSVIKNYSAFQYILCNFELWMK
APENLDLALFSHLVEILQSSRDGCQNAAVAYQVQMVSKITFLFNDPEISNSRITVACTIL
SHLLQGYFNTRDVLRIGLFLVYTLKPSSVDENQICLDSVAEMPNEALSQTSGKTIWLRNQ
LLKMLLDVMSSEKLHLSSEEQEETFLALGPDWFLLFTQSYLHSSTVVLGIKLLLCFLHNR
LLLNKFKEGIVAGRWLENSSEKLSILMDNLKTRPPVPDNGSILIFGFSVLQRCLTDHVHI
PEIYLLVAGLFLAAPQFEPPEAAKKDLESMLQWILQNHLTENVLKIGLCAEAAALLLEMV
RVTVDKPIADAEASWEVAYPGNVIQFLCLIYHSYTQDPVWHCPDFLKTLAMVAFHSGPPK
GGSEGLLSPDGPAIAEGKGCVDPSSLPLLPHPAKKQVWDFVRVLLMDSLLNIPANKQGHP
LELLLEAYPEDATAEQKRHFQTKVLLSAMDVFRVTSQGEGKTRPRGSSEPHGTSESTAPV
SMMNIAYFAQKLIEKLNSRMFAADPKQILIFIAKQIMGVLESSVSQKEVFLSALYSCLNR
AILYCLSRPQQSLPEQFNVLNTLNVLQEQWDIIFATYNSNNNFVVCLMYCLCQLNSGSYP
EGFGVDAKPKMASYHQIFLAPSEEEKGSLPTPDDVRQEILRTVEIIWKQLISQRRQVLED
TYKMDLSVKGNDKERDMKITEITPLWEEIMTKAWQHLIASEKKILQNKAGPGLSQSKHNS
WSESLSSAIRLMPGRNTKEMACKSEGFVSCMERYRRIGQELYASLYKNHIQVLQCGYSKA
AKDWMILEEELFYGSGPWGHASRSLQPRWILDCYEGPSRMRRRIQHVNTRATMMRMKTEV
LLGNRNETTPTAEVNPGELTLNGAEREMDKKGSDCNQLTFFPALHESFHSEDFFELCVER
QIILQEFTESEKVTFKCSVAVVQGHTALEGVLLFGKEHFYICECFVLSPLEEVYCTRHCL
SSISDPFIFNLCHKDHAVGDQMCSRYSYHDIKEIHLMRFLLQEIALEIFFKNGYSRFLVF
HDSDRNKIFKRFCSFQPALKSKGITEESLNIRKHSGGEKTMLQKWQKREISNFDYLMYLN
TLAGRSYNDHMQYPVFPWVLADYHSETLNLSNPHTFRDLSKPMGAQTVERKRKFIQRYNE
VEKSEGDLSAQCHYCTHYSSAIIVASYLVRMEPFTQTFCSLQGGSFDVADRMFHSVKSTW
ESASRDNMSDVRELIPEFFYLPEFLTNENHFELGCMQDGTVLGDVQLPPWADGDPHKFIL
LHRQALESDYVSAHLHHWIDLIFGHKQHGSAAVEAVNTYHPYFYGDKMDLNNIKDPLIKS
TILGFISNFGQIPKQLFTKPHPSRNAQGKSSSGRETVLSLHSSGILPPFMSSLQNLKLSP
VIIKDYPKGAIGHIVHTEKGILAVEKNKVLIPPLWSKTFCWGFEDFTCCFGNYGSEKNVT
TFECMADWGKCLCAVCPSATTIITSGTSSVVCVWELSLVKDKVKCLNLRQALYGHTQAVT
CLAASVTYSIFVSGSDDRTCIIWDLNKLMYINQLPAHGASLCSVAINNSTGDIISCAGSY
LYLWTVNGQLLASVNTSCSPGSRIVCCCFAEVMDWDTRSIVVTGSTDGVVRLWKTDYTNT
PGQAAGLRLQGGMMEEPGNMGMAAGNKCGKHLVLCRELNPSLALTGKPSKTSPAVTALAL
SRNSSKLLVGDDWGRVCCWSVDG
NT seq
9612 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatttcagcatggagacagcagctgaactcacatggcagctggaggattcacct
ggcaaagcaggacagcaagagcaaagccctgatgatggagacaaagcagaagtgccagga
cagcctgcacgcagcaaggacaagccactccagagccataccctccagtgggagattcta
ggcagacagtttgtagagtatgagcagatggctccatttctcatcccagaggagcaacag
agaaggctgctggactttcttcccctcttcttaaaggcctgggaacagtctgctggagta
atcgtattccccaacattcagctattagccagtgaggtttccaagcttctgacaaaagaa
attaagaggaacctcaatggcaaacctgcagaggaagctcgtcttgctttggagcaattg
ttgcaacagaaaggggaagcagaagatggccgtttgctcctgaaatcagtgtatctgctc
tcacagactgacttgagaactatgtgcaacatcattggatctggccttccagctgctctg
atgcagtgcctgtaccttttctttacttttcctctgaagaaaaccagtgatgatggagag
acaagcgaggatgacactcaaactcaggaaatgcttgttaagataatgcttaacatgtac
agagaggaacaaggtgtagaggaacttctggcagctgataagcttcagtcattaattata
gcaactgcttccctctgggaccagtgtagccactcatggaaaatacctacaggccgtgtg
ctgagaactatttcaaaggctcagaccaaaaccagcattgtgtacttacaagctgtggac
tgcattaaaatagctattcagaatctctttaaactggctgataccatacctgcttgtgat
gtgtgtgaagctgctagtattgtattgtgctttgtgaaagattcctatcccatatcatca
gctttgttaacagagtttgaaaataacgatggctaccaactcctgctaaaaattatactc
aggtgtgaggggttgcagcaaaatgaaggagacccctatctggatgagatcttggacatg
ctgacttgccttacaacctgtggaaaaactgaactgaaagtttctggcaacattgtacac
ccgcaattaccgcactttaattttgaacagacacggtcttctggaatgacagtgaaaaac
cttcaggcttttcaggtgttgcagtccattttcatgaaaagtaatgatcagcacctgtgt
ggaagaatcttggaggcaattggtaccatatgggcctgggacacagtgaacttctttctt
ctggaatggacactacaacctatcaaccagtttacagacataatccatttcaaaccacac
ccagtccaagtccagttcttcagactggtggagtccatagtgctagacctctcatatgtc
ccccatgaaattttgaagaaggttcagtatttgataaaggaaaacacagtaccattctgc
accttaacagctctccggtgccttctcagcatgactcagaaggacctgttattcagcgac
atattccgtgactctgggctcttaggcctactgttggcacttttgaggaagcaagccaag
atcctgaggaagtcggctggaacccatcagcctggtctggaagaaggcactgagaaggaa
ttaaatgctgttatgctgaagatggtggctgcccttacagtggggtctgtgaggaacact
gttgttctgaaggactatggaatggtgccatatatcaagatatttttggatgatgagtgc
tataggagtgctactctcagcatcttggagcagctatcagtcatcaactatgaagaatat
atgagcattattataggggccctctgttcttctactcaaggggaactacatctgaaactg
gatctgctgaagtcactcctgaggatactggagagtcccaagagccactcagctttcaga
acctgcagtggattcaatggactcctgtcccttctctcagacatggaaggtgcattgcag
gaccctccatctgggctgtgggcagcagttggacagaattgcatactggagcttgttttc
tacacgcttcagggaataacagcagccctgcacctggaccctgtcaacagcaacttcttc
cagaggaatggccttttcgaaaagatggcagaggatctcgggtcacttggatgcttctgg
acacaaggggaatggcaaatccctctgagccttgagaggacaaggacgtttggagaattc
ttggatgcagctttctgctcttcagaacctttcccaatgtggctaaagaactgcatatgg
attctgaattttcttgaccacatggtcaaaggaactctccatctggagagctacttcaag
gaggagagaaagccagagatgggagaggcatcaagagatgatcaggagggaccccaagct
caagaagagcatcctgttgctttcaaaagaccaggcaacaaattacctgcctctgcccat
aggttatggggaaatctagaagagaagtgggaaatgggagactgcgccattgtacatcca
ggtgctgtctgtgttatggtgaggttgctgccaaagctgtacaaagagggacactctcag
ctttcccaggaaatccaatgtgctgtggttgatcatatccagtctctggtgaagtcagag
aagagtcgccaggtgatgtgtggatctggcttgctgagcaccatcataacttcctgtcag
gatgccttccgcaatgagagccatccactgcatctgcccctcactagagtgtttgagaag
cttgcatcgcaggctattgagccagatgtgttaaggcaatttctttggttgggaggttct
ccaccactaccttccaggcccagcaaaaacaagtccactgccctttcatgtgattcagct
aacacagcttggaacgaaggttcagaaaaggacatggtggacaataaaactgatcctcag
acagttgtgcctgtcagcagctctccttgggtgtctaagggatctgcattggcactccaa
actgcaatgagtctcatctccatgacgtcacctcgaaacttccagctccgcaacactgct
ttggctccgtcatttgtggagtttgacatgtctatggaaggatatgggtgtttatacttc
cctaccttggccactgtcatgggacccagcgtagagcagtctgtctcaggaggaattggc
ataggcaccagaatgtttcctccctcaagtggcctgacgctctcctgctggtttcttgtt
agcaagtttggtttaatgcataacagtcacccactccgtttcctcacggttgtgaggcac
atgtcaaggacagagcaagaatttatttgcttttcagtaagcttcttcccacaggactgt
tctttggtcatttccacagaagaagtggaattccagccactcgatatcatggaacctgag
ggtgaggtcttaaatccctccccatttcccgggcaagtccagtttggctgtggcaacctg
ctggtcactggccagtggcatcatctcacagtgacagttgctaaggaaacgaggaagaac
tgtattgtgtcagcttatataaatggtcagatgcttggttctgcaaagatgcagtatttt
cagcccttaccaggtagctgtatttccatggaaccttcttcctttattgatgtctatgga
tacatagctactcctcgaatttggaaacagaagtccaccttgacctggcgccttggccct
acatacttatttgaagaagccatctctgtggaaaccatggaagtgattaataagcttggc
ccacagtattgtagcaatttccaagcagtacagcttcaaggtgaggacaagtacaatgat
cataatcctacacctctggtgtcagaagagaagatttcttttggaattaatgccgtgtgc
tcctctctcactacggtccaagatataaagagctcctacaatgaagtggatggccggctg
attgccaaagagattgggattaactctcgggacagttcaactccagtattcctagctaag
aatattgctggacacctttcgggttccttgcggactattgggtcagttgctgtgggccaa
tatggggtaagagtgttccagtcctctccagcagctactagcctgaacttcattggaggc
cctgccattctcctgggtctcattgctatggcccgtgatgaccacaccatgtatgcagcc
gtcaaagtcctgaactccatcctgaacagtagcccaatgagtgaaaaactgatgaggcac
atgcatggatacgagttgctgacatatctactgaagaggaagacacagctgttaaacaac
aggattttacagttaatgttctccctagtgggcacagctgagcttggctttgagtcttca
gtcatcaaaaattatagtgcattccagtacattctctgcaactttgagctttggatgaaa
gcaccagaaaatcttgaccttgctcttttttcacatcttgtggagatcttgcagtcctcc
agagatggatgtcagaatgctgcagttgcctaccaggtgcaaatggtgtccaagatcact
ttcctcttcaatgatcctgaaatcagtaactccagaatcactgtggcctgcactattctc
tcccatctgttgcaaggatactttaacacaagggatgttctcaggattggattgttcctt
gtttacactttgaaaccttcttctgtggatgaaaatcagatttgcctagacagtgtggct
gagatgcccaatgaagccttaagccaaacatctggaaagacaatctggcttcgaaaccag
ttactgaagatgctgttagatgtaatgagctcagaaaaacttcatctgtcctctgaggaa
caagaggagacgtttttggcgctggggccagactggtttctgctgtttacacagagctac
ctgcactctagcacggttgtgctaggaatcaagctacttctgtgcttcctccacaatcgt
ttactgttgaacaaattcaaggaggggatagtagctgggcgctggctggaaaatagctct
gagaagttgagtattctaatggataatttaaaaactcgacctccagtgcctgacaatggc
tccatcttgatttttgggttttctgtgttgcaaagatgtctgactgatcatgtccacatc
cctgagatctacttgcttgtggcagggctctttctggcagctccacagtttgagccaccc
gaagcagccaagaaagatcttgagtctatgttgcagtggatcttgcagaaccaccttaca
gagaatgtcctcaaaattgggttgtgtgcagaggcagctgctttactgctggaaatggtt
agagtcactgtggacaagcctattgcagatgcagaagcctcctgggaggttgcctatcca
gggaacgttatccagtttctgtgcttgatctatcacagttatactcaggaccctgtctgg
cactgtcctgacttcttgaaaactttggctatggttgctttccattctggaccacccaag
ggaggctctgaaggccttttgagtcctgatggtccagccattgctgaagggaaaggctgt
gttgatccctcctctctcccgctcctaccacaccctgccaagaaacaagtgtgggatttt
gtgcgagtcctcctgatggacagtcttctcaacattccagcaaacaaacaagggcatccg
cttgagctgcttcttgaggcttatccagaggatgccaccgctgagcagaagagacatttt
cagacaaaagttttgctgtctgctatggacgtcttccgtgttaccagtcaaggcgaaggg
aaaacaagaccaagagggagcagtgagcctcatggcacttcagaatcaactgcacctgta
tccatgatgaatattgcttattttgctcagaagctgattgaaaagctgaacagtagaatg
tttgctgctgaccccaagcaaatcctgatcttcattgcgaaacagattatgggggtctta
gagagctccgtttctcaaaaggaagttttcctcagtgccctgtacagctgtctaaacaga
gccatcctatactgcttatccagaccacaacaatcgctgcctgaacagtttaatgtcctg
aacactctcaatgtcctgcaggagcagtgggacattatttttgcaacttacaattcaaat
aataattttgtcgtctgcctaatgtactgcctttgccaactgaattcgggcagctatcca
gaaggttttggggtggatgcaaaaccaaagatggcttcctatcaccaaattttccttgca
cccagtgaagaggaaaagggcagcctgcctactccagatgatgttcgtcaggagattctg
agaacagtagaaatcatctggaagcagctcatttctcagaggcggcaggttctggaggac
acttacaaaatggatctttctgtaaaaggaaatgacaaagaaagggacatgaagataacg
gagatcactcctttatgggaagaaattatgacaaaagcttggcaacacttgatagcatct
gaaaagaagattctccagaataaagcagggccaggcctatcacagagcaagcacaattcc
tggagtgaaagcctctcttcagctattaggttgatgcctggccgaaacacaaaggaaatg
gcatgcaaatctgagggatttgtgtcatgtatggaacggtaccgaagaattgggcaggag
ctgtatgcctctttgtacaagaaccacatacaggtgctgcagtgtggttacagcaaagca
gccaaggactggatgatacttgaggaggaacttttctacggaagtggcccgtggggacat
gcatcacgatccttacagccacggtggattcttgattgttatgaagggccttcacgaatg
aggaggaggattcagcatgtgaacacccgagcgacaatgatgcgaatgaagactgaggtt
ctcctaggaaacagaaatgaaacaacccccactgctgaagtgaatccaggagagctgaca
ttaaatggagcagaaagggagatggataagaagggatcagattgtaaccagctgacattc
ttccctgctctacatgaaagtttccattcagaagacttctttgaattgtgtgtggagaga
caaattatattgcaggagtttacagagagtgaaaaggtcacgttcaagtgctctgtggca
gttgtgcagggacatacggcattggaaggagtgctgctttttggcaaagagcacttttac
atctgcgagtgctttgttttatcccctttagaagaagtctactgtacacgtcactgcttg
tccagcatcagtgatccctttattttcaacttatgtcataaagatcatgctgtgggagat
cagatgtgttcccgttattcgtatcatgatatcaaagagattcatctgatgcgctttctt
ctgcaggagatcgccttggaaatattcttcaaaaatggttactccagatttcttgtcttc
catgacagcgaccgaaataagatatttaagagattttgctctttccaacctgctttgaag
tcaaaggggataacagaagagtccctgaatataaggaaacactcaggaggggagaagaca
atgctccagaagtggcagaagagggagatcagcaactttgattacctcatgtacctgaac
acattggctggtcgcagctacaacgatcacatgcagtatcctgtgtttccatgggtcctc
gctgactatcactccgagactctaaacctttcgaatccccatacatttcgggacctgtca
aaacccatgggagcacaaactgtggagaggaaacgcaagttcattcagcgctacaatgag
gtggagaagagtgaaggagacctgtcagcccagtgccattactgtactcactattcatca
gcaattatagtggcgtcttacctggtccgaatggagccatttacccagaccttctgttct
ctgcagggtgggagttttgatgttgcagacaggatgtttcacagtgtcaagagcacatgg
gaatcggcatcaagggacaacatgagtgatgtcagggaactcatccctgaattcttctac
ttgccagagttcctaaccaatgagaatcactttgaacttggctgcatgcaggatggaaca
gtgctgggagatgtgcagcttcctccttgggcggatggggacccccataaattcattctc
ctgcacagacaggcactggaaagtgactatgtcagtgcacacctccatcactggatagat
ctgatttttggccacaagcaacatggctcagctgcagtggaggcagttaacacctatcac
ccttatttctacggagacaagatggacctcaacaacattaaagatcctcttattaagagc
accatcctgggttttatcagcaactttggacagataccaaagcagctcttcacgaaacca
catccatccaggaatgcccaagggaaaagttcatcgggaagagagactgtactgtcactt
cactcaagtggaattcttcctccttttatgagtagcctgcaaaatttgaagctctcgcca
gttataataaaagactatcccaagggagctattgggcacattgttcatactgagaaaggc
attctggctgttgaaaagaataaagttttgattcctcctctctggagcaaaacattctgc
tggggatttgaggatttcacctgctgctttggcaactatggttctgagaagaatgtgaca
acatttgagtgcatggcggactggggaaagtgcctctgtgctgtgtgtccttcagcaact
accataatcacatctggaacaagctcggttgtgtgtgtctgggaactttccttggtcaag
gacaaagtgaaatgtctgaacttgagacaggctttgtatgggcacactcaggcagtgacc
tgccttgctgcgtctgtgacctacagcatctttgtgagtggatctgatgacagaacctgc
atcatttgggacctgaacaagctgatgtacataaaccagcttcctgcccacggggcaagc
ctctgttctgttgccatcaacaattcaacaggtgatattatctcttgtgctggatcttac
ctatatctgtggacagtcaatggccagcttcttgcaagcgttaacaccagctgcagcccc
ggaagccgtatcgtttgctgctgctttgcggaagtgatggactgggacacacgcagcatc
gtcgtcacaggaagcacagatggagtggtgaggctgtggaagactgactacaccaatacc
ccaggccaagctgctggactgagacttcagggaggcatgatggaagaacctggcaacatg
ggtatggccgcaggtaacaagtgtggaaaacatcttgttctctgtcgggaactgaatccc
agccttgccttgactggaaaaccaagtaagaccagcccagcagtgacagcactggctcta
tccagaaattcctccaagctcctcgttggtgatgactggggaagagtctgctgctggtct
gtggatgggtag
DBGET
integrated database retrieval system
