Rissa tridactyla (black-legged kittiwake): 128911172
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Entry
128911172 CDS
T09443
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128911172
Membrane trafficking [BR:
rtd04131
]
Protein recycling
Others
Others
128911172
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GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
128911172
NCBI-ProteinID:
XP_054061513
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Position
6:complement(60975468..61279117)
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AA seq
1256 aa
AA seq
DB search
MEKVAGWYPAWHVALLYWTWLFLFTFGFTGAEITCRSCHSQVKLQQQHPQQGLLMHLRTD
RGEKEQRRFPGEKGGERGQGAGMEAEDAGLQETLAPAPAGTKFSGWETRRLTREPEKAAG
ARRPRAAAPAEDHPPRGRGSPPGGGRPGSVRRRRGRIPRGAAGREPGEAGAARFGLEELR
LGSTTFALAGDSAHNQAMVHWSGHNSSVILILTKLYDYNLGSITESSLWRSTDYGTTYEK
LNDKVGLKTILSYLYVCPTNKRKIMLLTDPEVESSLLISSDEGATYQKYRLNFYIHSLLF
HPKQEDWILAYSQDQKLFSSVEFGRRWLLLHEGVAPNRFYWSMMGSGREPDLVHLEAKTV
DGHAQYITCKMQNCSEATRSKPFPGYIDHNSLIVQDDYVFVQLTSGGRPHYYVSYRRNAF
AQMKLPKYSLPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVKSSQ
GLEGNLMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWSLLQAPDTDLRGNPIHCL
LPYCSLHLHLKVSDNPYTSGNIASRDTAPSIIVASGNIGTELSDNDISMFVSSDAGNTWR
QIFEEEHSVLYLDQGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYSFTSLPLFVDGVLGEP
GEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYR
KRNSEKKCMQGKYAGAMTSEPCVCTEADFDCDYGYERHSNGQCLPAFWYNPSSLSKDCSL
GQSYLNSTGYRKVVSNNCTDGVRERYTAKPQQCPGKAPQGLRIITSDGKLTAEQGHNVTF
LVQLEEGDLQRSLIQVDFGDGIAVSYANLSSTEDGIKHIYQNVGIFRVTVLVENSLGSDN
AVLYLHIICPLEHVHLSLPFVTTKNKEVNATAVLWPSQVGTLTYIWWFGNNTEPLITLEG
SITFTFSVEGMNTITVQVSAGNTILQDTKTIAVYEQFQSLRLSFSANLDDYNPDIPEWRR
DISRVVKRALVEATGISSKHILVAVLPGLPTSAELFILPYQDATGENKRTAADLEQISET
LIQKLNQNLVHFELKPGVQILVHAAHLTAAPLVDLTPSHSGSAMLMLLSVVFVGLAVFII
YKFKRKIPGLNIYAQMQNEKDQEMVSPVSQSESIPNVPQSELVSPEQLVDEKLEVQPIEQ
PQATVQNPRKGNATKVVWTEDFQKACGSPRGFKPRPGAEVFPQLLSPRAQKKSLPM
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagttgctggctggtacccagcctggcacgttgctctcctgtactggacatgg
cttttcctcttcacttttggctttaccggtgcagaaataacttgcagatcctgccattcc
caggtgaagctgcagcagcaacatccgcagcagggattattaatgcatttgaggaccgac
agaggagaaaaggagcagaggaggttcccgggggagaagggaggtgagagagggcaaggg
gccgggatggaggcggaggatgccgggctgcaagagaccctcgcccctgctccggcgggg
acgaaattcagcggctgggagacccggcgattgacgagggagccggagaaagcggccggg
gcgaggcggccccgagcggcggctcccgccgaggaccatcccccccggggccgggggtcc
cccccggggggcggccggccggggtcggtccggcggcggcggggccgcatcccgcggggc
gcggcggggcgggagccgggggaagccggcgccgcccgcttcgggctggaggagctgcgg
ctgggcagcaccaccttcgccctggccggcgactcggcgcacaaccaagccatggtgcac
tggtcggggcacaacagcagcgtgattctaattctgacaaagctgtatgactacaacctg
ggaagcatcacagagagctctctttggaggtcaacagattatgggacaacatatgagaaa
ctaaatgataaagttggcctgaagactattttgagctacttgtatgtttgtccaacaaac
aaacgtaagattatgctactgactgatccagaagttgagagcagcttattaatcagttct
gatgaaggggccacctatcaaaaataccgtctgaacttctacatccatagtctgctcttc
catcccaagcaggaagattggatcttagcatacagccaagatcagaagttattcagttca
gtggagtttggcagaagatggctgcttcttcatgagggagttgcaccaaacaggttctac
tggtccatgatggggtctggtagagagcctgatctcgtgcacctggaggcaaagacagtg
gatggtcatgcccaatacatcacctgcaagatgcagaactgcagtgaagccactcgcagc
aaaccctttccgggctatattgaccataactctctgatcgtccaggatgattatgtcttt
gttcagttgacatcaggaggaagaccacattattacgtttcttataggaggaatgctttt
gcacagatgaagttgccaaagtactccttgcccaaggacatgcatgttatcagcacagat
gagaatcaggtgtttgcagctgtacaagagtggaaccagaacgacacgtacaatctgtat
atctccgacacccgaggggtgtacttcaccctggccttggaaaatgtcaagagcagtcaa
gggctggaggggaatttgatgattgacctctatgaggtagcagggataaagggaatgttc
ttggctaacaagaagattgacaaccaagtgaaaactttcatcacctacaataaagggaga
gactggagtttgttgcaggctccggacactgatctgagaggaaaccctattcattgtctc
ctaccctattgctcccttcatcttcacctgaaggtctcagataatccctatacctcagga
aacatcgccagccgagacactgcccccagtattattgtagcttcaggtaatataggcact
gaactatcagacaatgacatcagcatgtttgtttcttctgatgctggaaacacttggaga
cagatctttgaggaagagcacagtgttctgtacctggatcaaggtggagtactggtcgcc
atgaaacacacatctctgcctatcagacatctctggttaagttttgatgaagggagatct
tggagcaaatacagtttcacatccctcccactgtttgtagatggagttttaggggaacct
ggagaggaaactctcatcatgacagtgtttggacatttcagccaccgctcagagtggcag
ctagtgaaagtagactacaagtccatttttgatcggaggtgcgcagaagaggactacagg
ccttggcaactccatagccagggagaagcttgcatcatgggagcaaaaaggatctacagg
aagcgcaactcagagaagaaatgcatgcaaggaaaatacgctggggctatgacctcggag
ccatgcgtgtgcacagaggcagactttgactgtgattatggatatgaacgtcacagcaat
gggcagtgtttaccagcattttggtataacccatcttccttgtcgaaagattgtagcctt
ggacagagttacctcaacagcactggataccggaaagtagtttctaataactgcacggat
ggtgtgagagaacggtacacagcaaaaccacagcaatgtcctggcaaagccccccagggc
cttcggataatcacatctgatggcaaactgacagccgaacaaggacacaatgtcactttc
ctcgtgcaactggaagagggagacctccagagatcactcattcaggtggattttggagac
ggcattgctgtgtcgtatgccaatctcagctcaacagaagatgggatcaagcacatctac
cagaacgtgggcatattccgagtgaccgtgctggtggaaaacagcctgggatctgacaac
gctgtcctctacctgcatataatatgccccttggaacatgttcacttatctctaccattc
gtcaccacaaagaacaaggaggtcaacgccacggcagtactgtggccaagccaagtggga
acgcttacttacatctggtggttcgggaacaacacggagccactgatcacattggaagga
agtatcacattcacattttctgtggaagggatgaataccatcaccgttcaggtctcagca
ggaaacaccattcttcaggatacaaagactattgctgtgtatgagcaattccagtccctg
cggttgtcgttctctgcaaacctggatgactacaatccagatatcccagagtggagaagg
gacatcagtagagtagtcaagagagctctggtggaggcaacaggtatttcaagcaagcat
attctggtcgcagtgctccctggtctgcccacgtctgccgaactcttcattttaccatat
caagatgccacaggagaaaataaaagaacagcagcagacctagagcagatttcagaaacc
ctgatccagaaactgaaccaaaacctggtccattttgagttgaagccaggggttcaaatc
cttgtccatgctgcccatttaacagcagctcccctggtggacctcactcccagtcacagc
ggttcagctatgctgatgctcctctctgtcgtttttgtgggactagccgtgtttataatc
tacaagttcaaaaggaagattcctggccttaatatatatgcacagatgcagaatgaaaaa
gatcaagagatggtcagtccagtcagtcagagcgaaagcatacctaatgtccctcaaagt
gagctggtgagccctgagcaactagtagatgagaagttggaagtccagcccatagagcaa
ccccaggccacagtccagaacccaaggaaaggaaatgcaaccaaggtagtctggacagag
gacttccaaaaggcttgtggatcaccaagaggtttcaagccaagacccggagcggaagta
tttccacagctgctgagccccagagcacaaaagaaatcccttcctatgtaa
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