Rissa tridactyla (black-legged kittiwake): 128911187
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Entry
128911187 CDS
T09443
Symbol
PPIF
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase F, mitochondrial
KO
K09565
peptidyl-prolyl isomerase F (cyclophilin D) [EC:
5.2.1.8
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128911187 (PPIF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rtd03110
]
128911187 (PPIF)
Enzymes [BR:
rtd01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
128911187 (PPIF)
Chaperones and folding catalysts [BR:
rtd03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
128911187 (PPIF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
128911187
NCBI-ProteinID:
XP_054061548
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Position
6:complement(46030958..46039035)
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AA seq
208 aa
AA seq
DB search
MLALSAARRLLRPPGDLLLLPPPPGLAGMWAAGARGCSAAGADPPNPVVYLDVGVDNQPL
GRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQGGDFTNHNGTGGKS
IYGSRFPDENFILKHVGPGVLSMANAGPNTNGSQFFICTAKTDWLDGKHVVFGHVKEGMD
VVKKIERFGSKSGKPTKKIVITDCGQLS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgctgagcgccgcccgccgcctgctgcgcccgcccggcgacctgctgctgctg
ccgccgccgccggggctcgccggcatgtgggcggccggcgcccgcggttgcagcgcggcc
ggcgccgacccgccgaacccggtggtgtacttggacgtgggcgtcgacaaccagccgctg
ggacgtgtcgtgctggagctgaaagctgatgttgttccaaagacagcagaaaactttaga
gctctctgtactggtgaaaaaggatttgggtataaaggatccacttttcacagagtgatt
ccttcctttatgtgccagggtggtgactttacaaatcataatggaaccggtggaaaatcc
atttatggcagtagatttccagatgaaaatttcatacttaagcacgtaggacctggtgtt
ctttcgatggccaacgcgggacccaatacaaatggatctcagttcttcatttgcactgca
aaaactgactggctagatggaaaacatgttgttttcgggcatgtaaaggaaggaatggat
gtcgtgaaaaaaattgagcgatttggttccaagagtggaaaacccaccaaaaagattgtc
attactgactgtggccagctgtcctag
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