Rissa tridactyla (black-legged kittiwake): 128911255
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Entry
128911255 CDS
T09443
Symbol
GBF1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128911255 (GBF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128911255 (GBF1)
Membrane trafficking [BR:
rtd04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
128911255 (GBF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF1045
DUF758
Motif
Other DBs
NCBI-GeneID:
128911255
NCBI-ProteinID:
XP_054061785
LinkDB
All DBs
Position
6:51178252..51286595
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AA seq
1899 aa
AA seq
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MRGTVRMVDKNIYIVQGEINTVVGAIKRNARWSTHTHLDEERDPLLHSFSLLKEVLNNIT
ELSEIEPNVFLRPFLEVIRSEDTTGPITGLALTSVNKFLSYALIDPSHEGTAEGMENMAD
AVTHARFVGTDHASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLS
ELLRKSAEHTLVDMVQLLFTRLPQFKEEPKSYMGTNMKKISSCLLNKLELSSGEQLKALN
QLERVLLFKNLKLKMRAGGMSESSKWKKQKRSPRPPRHVTKVSPGTEQPAASTNTTTASG
VTFIDAPPSSSGSSENVSSAVSPATDSGLELSSQTTSKEDLTDLDQVASLGLNAGMPSNE
AKVTENQNQPELQNESLREEKIQSASVESIPEVLEECTSVAEHSDSASVHDMDYVNPRGV
RFTQSSQKEGAALVPYGLPCIRELFRFLISLTNPHDRHNSEVMIHMGLQLLTVALESAPI
ANCQSLLGLVKEELCRHLFQLLSVERLNLYATSLRVCFLLFESMREHLKFQLEMYIKKLM
EIITVENPKMPYEMKEMALEAIVQLWRIPSFVTELYINYDCDYYCANLFEELTKLLSKNA
FPVSGQLYTVHLLSLEALLTVIDSTEAHCQAKVLSNIHQQDKEAVKFSPETMNSTKDTSN
NNERVLSEGKSSTAVSEPAGACPPTSGCLMADQMKEGCMDLEGGSEAAEKNIPRKPTRFS
CILPSPQELMQIKNKKKLLITGTEQFNQKPKKGIQFLQEKNLLATPIDNNEIARWLRENP
RLDKKMIGEFVSDRKNIDLLESFVGTFSFQGLRLDEALRLYLEAFRLPGEAPVIQRLLEA
FTEHWRKSNGSPFANSDACFALAYAVIMLNTDQHNHNVRKQNVPMTLEEFRKNLKGVNGG
KDFEQDILEDMYHAIKNDEIVMPEEQTGLVKENYIWNVLLHRGATDEGIFLHVPPGSYDH
DLFTMTWGPTIAALSYVFDKSLEETIIQKAISGFRKCAMISAHYGLSDVFDNLIISLCKF
TALSSESIENLPTVFGSNSKAHIAAKTVFHLAHRHGDILREGWKNIMEAMLQLFRAELLP
KAMVEVEDFVDPNGKIYLQREETPSNRGESTVLSFVSWLTLSGTEQSGMRGPSTETQEAK
RMALECIKQCDPEKLITESKFLQLESLQELMKALISVTPDEETYDEEDAAFCLEMLLRIV
LENRDRVTCVWQTVRDHLYHLCVHAVEFCFLVERAVVGLLRLAIRLLRREEISAQVLLSL
RILLMMKPNVLSRVSHEVAYGLHELLKTNAANIHSGDDWYTLFTLLECIGSGVKPPAALQ
VTARADNDTGAQSDSEVSSSCHPSDMSLDRGYTSDSEVYTDHGKPGKMHRSVTDVDVVNS
GWLVVGKDDIDTSRSTAGLSRLGPSPLVNQYSLTVGLDLGPHDTKSLMKCVESLSFIVRD
AAHVTPENFELCVKTIRIFVEASLNGGYKSQEKRGKSHRYDSKSSRLKKKPKESSTRRSR
VLSQHQAHTHSDEDEDESIPASYHTVSLQVSQDLLDLMHTLHTRAATIYSSWAEEQRHLE
TIGRKIEADSRTLWSNCWCPLLQGIAWLCCDARRQVRMQALTYLQRALLVHDLQALDALE
WESCFNKVLFPLLTKLLENISPADVGGMEETRMRASTLLSKVFLQHLSPLLSLTTFAALW
LTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVMDTAGIFHSADSRTGYSDLWEITWERI
DCFLPRLRDELFKQAVIQDPVPSIPVEQQHQKSIVSALPSSPVGDVRPGTHLAPLEKPCE
LGASESERAAAPASPTISTSASPSFPASAPTKTSPVTDIPPATAQPPLILQPLASPLQVG
VPPMTLPIILNPALIEATSPVPLLATPRPTDPLTTSEVN
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggactgtcaggatggtggataagaacatttacattgtacaaggtgagatcaac
acggtggtgggagccataaagcgtaatgcccgatggagcactcacacacatctggatgaa
gaaagggatcccctgctgcatagctttagccttttaaaagaagtgctgaataatataaca
gagctatctgaaattgaacccaatgtctttcttcggcctttcctggaagtaatccgttct
gaagacactacaggccccataactggattggccctcacctctgtgaataagttcctctca
tatgcactaatagatcccagccatgagggcacagcggaggggatggagaacatggcagat
gctgtcactcacgcccgatttgtgggcacggatcatgcgagcgatgaggttgtcttgatg
aaaatcctgcaggttttgaggaccttgctgctcactccagtgggagcccacctcaccaat
gaatctgtgtgtgagatcatgcagtcctgcttccgcatatgctttgaaatgagactcagc
gagttattgagaaaatctgcagagcacactctggtcgacatggtgcagctgctcttcaca
aggttgcctcagtttaaagaagagcctaaaagctacatgggaacgaacatgaagaaaatc
tcttcatgtctcctcaacaaactggagctaagtagtggggaacagctcaaagccctgaac
caattagagagggtattgctctttaagaacctgaagttgaaaatgagagctggaggaatg
agcgagtcatcaaaatggaaaaagcagaagagatcaccgaggccgcctcgccatgtaact
aaggtctctcctgggacagaacaaccagcagccagtactaacaccaccacagcaagcgga
gttactttcatagatgctcctcccagctcctctgggagctcagaaaatgtttcatctgca
gtcagccctgctacagacagtggtttggagttgtcctcacagactacctccaaggaagat
ctgacagacttggaccaagtcgcttctttgggtcttaatgcaggaatgccttcaaatgag
gccaaagtcactgaaaatcaaaatcagcccgaacttcagaatgaaagtctgagggaggag
aagatccagtcagcttccgtcgagtctatccctgaggtcctagaggagtgcacatctgta
gcagaacattctgactctgcctcagttcatgacatggactatgtaaatccccgaggagta
cgttttactcagtcttcccaaaaagaaggagcagcactggtcccctatgggctaccatgt
attagggaactgttccgctttcttatctcgctcaccaaccctcatgaccgccacaactct
gaggtgatgatccacatggggctgcagctgctaactgttgccctggagtcagcacccatt
gcaaactgccagtccctcttgggacttgtgaaggaggagttgtgccggcacctatttcaa
ctgctgagtgttgaacggctcaatctgtatgcaacctccctcagggtgtgctttcttctc
tttgagagcatgagagagcatctgaaattccagctggagatgtacatcaagaagctgatg
gaaattatcactgtggaaaacccaaagatgccctatgaaatgaaggagatggctttggag
gccattgtccagctgtggaggatccccagtttcgtgacagagctctacataaactacgac
tgtgactactactgcgccaacctcttcgaggagctcaccaagctgctctccaagaatgcc
ttcccagtttctggacagctgtatactgtccatctgctgtctctggaagcattgctgaca
gtgatagatagcactgaggcacattgtcaggccaaagtgctgagtaacatacatcaacaa
gacaaggaagctgtcaaattcagtccagaaaccatgaacagcaccaaagacacaagcaat
aataatgagagagtactcagtgagggaaaatcttccactgcagtctcagagccagctggg
gcatgtcctcccaccagtgggtgccttatggctgatcagatgaaggaaggctgcatggat
ttggaaggaggaagtgaggcagctgagaagaatatccccaggaagcctacccgattttct
tgtatccttccaagccctcaggaacttatgcagattaagaacaaaaagaagctcctgata
accggcacagagcagttcaaccaaaagccaaagaaagggatacagtttctgcaggagaag
aaccttcttgccacccccattgacaacaatgagatagccaggtggctacgggaaaatcct
cgcctggacaagaagatgattggggaatttgtgagcgaccgtaagaacatagacttgctg
gaaagctttgttgggactttcagcttccaaggtttaaggttggatgaagccttacgactt
tatctagaagccttcagattaccaggagaggcacccgtaatccagagactgttggaagcc
ttcacagaacattggaggaaatcaaatgggtccccatttgctaatagtgatgcctgcttt
gccctggcctatgcagttattatgctgaacactgaccagcataaccacaatgtccgcaag
cagaatgtcccaatgactctggaggagtttcggaagaacctgaaaggtgtgaatggaggc
aaagactttgaacaggacatattggaagacatgtaccatgccatcaaaaatgatgagata
gtgatgccagaagaacagacgggcctggtgaaggaaaactatatctggaatgtcctgcta
catcgtggtgccactgatgagggaatatttctccatgtgcctcctggaagctatgaccat
gatctcttcaccatgacatgggggccaaccattgcagcactttcttatgtttttgacaag
agcttagaagaaacaatcatccagaaggctatctctggtttcaggaaatgtgcaatgatt
tctgctcactatggccttagtgatgtgtttgacaatctcataatttctctctgcaagttt
acagccctcagcagcgagtctattgagaacctgcccactgtttttggaagtaattccaag
gcccatattgcagcaaagactgtgtttcacttggcccatcgccatggtgacattctgcgg
gagggctggaaaaacatcatggaggccatgctacagcttttccgagcagagctgctgccc
aaggccatggtggaggtcgaagactttgtggatcctaatggcaaaatctatctgcaacgt
gaggagacaccatctaaccgtggtgaatctacagtcctgagttttgttagttggctcacc
ctcagtgggacggagcaatctggtatgagagggccatctacagagacacaagaggcaaag
cgaatggctttggaatgcataaagcaatgtgatcccgagaagttgatcacggaaagcaaa
ttcctccaacttgaatccctccaggaactcatgaaggctctaatctctgtgactcctgat
gaagagacatatgatgaagaggatgctgccttctgcttggagatgcttctgaggattgtg
ctagagaatagggaccgtgtgacctgtgtctggcaaactgtccgagaccatctctatcat
ctctgtgtccatgcggtggagttctgcttcttggtggagagggcagtggtggggctgctg
agactggcgattcggctccttcgtcgggaagaaatcagtgcgcaggttctcctctcatta
cgtatcctgctcatgatgaagccaaatgtgctgtccagagttagccatgaggttgcctat
ggccttcatgaactcctgaagaccaatgctgctaacattcactccggggatgactggtac
acactcttcaccctcctggagtgtattgggtctggggtgaagccgcctgcagccctgcag
gttacagcaagggcagataatgacacaggtgctcagtcggacagcgaggtctcctcctcc
tgtcatccaagtgacatgagcctggaccgtggctacacctctgattcagaggtgtacaca
gaccacgggaagccaggcaagatgcatcgctcggtgacagatgtggatgtcgtgaacagt
ggctggctagtggtggggaaagatgacatcgacacctccagatccacagctgggctcagc
aggctggggccatctcctcttgtcaaccagtacagcctgactgtggggctggatttgggc
ccacatgacacgaagtctctcatgaagtgcgtagagtccttgtccttcattgtgcgagat
gctgcccatgtcacacctgagaactttgagctctgtgtcaaaaccatccgtatctttgtg
gaggcaagcctgaatggcggttacaagtcccaggagaagagggggaagagccacaggtat
gacagtaaatccagtcggttaaaaaaaaagccaaaggagagctccacacggcgatcacgg
gtcttgagccagcaccaggcgcacacacacagtgatgaggacgaggatgagagcatccct
gccagctaccacactgtgtctttacaggttagtcaggacctcctggacctcatgcacacc
ttgcacacacgagcggccaccatctacagctcctgggcagaggagcaacgccatctagag
acaatagggaggaaaatcgaagcagattcccgaacactgtggtccaactgctggtgtcct
ttgctacagggtattgcctggctgtgctgtgatgcccgacgccaggtacggatgcaggca
ctcacttacttgcagcgggcccttctggtacatgacctgcaggctctggatgccctggaa
tgggagtcctgtttcaacaaggtgctgttccctctgctaaccaagctactcgagaacatc
agcccagctgatgttggtgggatggaagaaactaggatgagagcctcaacgctactctcc
aaggtattcctacagcatctctccccgctgctctcactgaccacctttgctgccctgtgg
ctgacaatcctggactttatggacaaatacatgcatgctggctccagtgacttactgctg
gaggccatcccagagtctctgaagaatatgctgcttgtaatggatacggctggaatattt
cacagtgctgattcacggacgggatactcagatctctgggagatcacctgggaacggatt
gactgtttcttacctaggctgcgggatgagctcttcaaacaggcggtcatccaagatcct
gtccccagcataccagtggagcagcagcatcagaaatcaatagtgtctgccctgccctct
tctcctgtgggggatgtgagaccaggcacccacctggctcctttggagaagccctgtgaa
ctgggtgccagtgagtctgagcgagccgctgcacctgcctcacccaccatcagcacctct
gcctctccttctttcccagcctcagctcctacaaagacaagccccgttacagacatacct
cctgcgacagcacagccgccactcatcctgcagcctcttgcctctcccctgcaggttggg
gtgccacctatgactctgccaatcattctcaacccagccctaattgaagccacctctcct
gtgcccctcttagctactccacggcccactgaccccttgacaacctctgaagtcaattag
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