Rissa tridactyla (black-legged kittiwake): 128911319
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Entry
128911319 CDS
T09443
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtd04990
]
128911319 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
rtd04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
128911319 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
Fn3_Dep-1_4th
Ig_DSCAM-DSCAML_C
EGF_3
cEGF
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
128911319
NCBI-ProteinID:
XP_054061973
LinkDB
All DBs
Position
6:complement(15770767..15791785)
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AA seq
1444 aa
AA seq
DB search
MRGLAGWAVLVALGEWLWAGGVVPLADFYPFGPTQGDAATRKQDDGGSELRPLSVPFPFF
GAGHTGLYVNNNGIISFLKEVSQFTPVAFPISKDRRVVAAFWADVDNRRAGDVYYRESTE
QPILERASRDIVQYFPEFPEFSAQWVFIATWYRVTFFGGSSFSPVNTFQIVLITDGKLSF
TIFNYESITWTTGMHASSGGDFAGLGGIAAQAGFNAGDGKRYFNIPGSRTDDIADVEMTT
NVGIPGRWVFRIDDAQVQVGGCSNTTSVCLMLRPCLNGGKCIEDCITGNPSYTCSCLAGF
TGKRCHVDVDECLSHPCQNGATCLNGAGSFSCRCPPDFRGTSCETEKSPCESRVCQNGGR
CQALNRTATCLCQPGYTGADCQTEVNECESSPCLNGGHCVDLVDNYTCVCLEPFVGQRCE
TDSSSCEDRSCRNRQTCNYIRPGRYICTCSPGYYGNNCQYGGPRVPGACLSHPCQNNGSC
LETEQGYICECQEGYTGQDCRDKLSEGCECRNGGSCLEGNVTICQCPPGFFGLLCEFEVT
TTPCNMNTQCPDGGYCMEYGGSYLCVCHTDYGTNHTMPSPCDSEPCLNGGSCEVHDDSYT
CECPRGFLGKHCEKAKPRLCSTGPCRNGGTCREADGEYHCTCPYRFTGKHCEIGKPDPCA
SGPCQNGGTCFHYIGKYKCDCPPGYAGRHCEIVPSPCFLSPCENGATCEDLDGGYTCTCP
VGYVGKHCQSEVDCGIPSEVKHAQASFNSTKVGSLAEYQCELGYTLSQHNHPRVCRLPGV
WSDPPECDEIDECWSQPCLNGGQCKDRVAEFLCLCEAGYTGHHCESDVDECRSEPCKNGG
TCQDLPASFACYCPEGFVGTQCETEVDACESGPCQNGGECESYGGSYLCVCPEGFFGYHC
ETASDPCFSSPCGSRGYCLPGNGTHSCTCKVSYTGKSCEKELLPPTSLKVERVEDTGVLI
SWHPPEDAAARQHIDGYAVTYVSLDGSYRRTDFVDRSRSAHQLRALASGRAYNISVFSVK
RNVNNKNDISRPVMLTTRTRPRPVEGFEIMNVTASAITVQWALHRLKHSTVSRVRVSIRQ
PGDLADRTVELNSSVAKYTFLDLQPGERYIIHVTTLSGLGTEDHPSESLATAPFHVWTRP
LSPQNLTASRVTATSVSMVWEQPPTGAVEGYIINVTTAQSVKSRYVPNGKLVSYTVRDLL
PGQRYRLSVTAVQNTEQGQVHSEPIHLYITTLQRDGAPERRWSQAGHPRVLRNRLPPAFL
PELRLLADHDTAEEPSPAPRFTELVDGRGRISARFGTTLGKSITVKTQPEAPVKLENVEV
SSQGSLAMQLREAKSKSEGQNCSMNPCRNGGTCTRDTKSYHCDCRPGFKGRLCELACKKV
PHSCTRLYSETKSFPVWEGGTCHYLYRRVYKVHQDVCYKESCESTGAKKTTSRKPSNSHT
LKKP
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcctggcgggctgggccgtgctagtggccctgggcgagtggctgtgggcgggc
ggcgtggtgcctctggcggacttctaccccttcgggcccacgcagggcgacgccgccacg
cggaaacaggacgacggcggctccgagctgcggcccctctctgtccccttccccttcttc
ggcgcggggcacaccggcctctacgtgaacaacaatgggatcatctcattcctgaaggag
gtctctcagttcacaccggtggccttccccatctcaaaggaccggcgtgtggtggctgct
ttctgggcagatgtggataaccggcgggctggtgatgtgtattaccgggaaagcaccgag
cagcccatcttggagagagcaagcagggatatcgtgcagtatttccctgagttcccagag
ttttctgcgcagtgggtcttcattgctacctggtaccgcgtcaccttcttcggaggcagt
tcgttttcgccagtaaacactttccagatcgtcctcatcacggacggcaagctctccttc
accatattcaactatgagtctatcacctggaccacgggtatgcacgccagcagtgggggg
gactttgccgggcttggcggcattgcggcgcaggcaggttttaacgctggtgatggaaag
cgctacttcaacatccccggatcccgcaccgatgacatcgctgacgtggagatgacgaca
aatgtgggtatccccgggcgctgggtgttcagaatcgatgatgcccaggtgcaagtgggg
ggctgcagcaatacaacctctgtctgcctgatgttgcggccctgcctgaacgggggaaag
tgtatcgaggactgcatcacggggaacccctcctacacctgctcctgcctggccggcttt
acagggaagaggtgccatgttgatgtggatgagtgtctctcccacccgtgtcagaacgga
gccacctgcctcaatggtgccggcagcttcagctgcaggtgcccaccggacttcagaggc
accagctgcgagaccgaaaagtcaccgtgtgagagcagggtgtgccagaatggtgggagg
tgccaggcattgaacaggactgcgacatgcttgtgccagccaggatacacaggggcggac
tgtcagacagaggtgaatgagtgcgagtccagcccatgcctgaatggcgggcactgtgtc
gatctggtcgataactacacctgtgtgtgcctggagcccttcgtgggacagcgctgtgag
acagattcatcttcctgcgaggaccggagctgccggaaccggcagacgtgcaactacatc
cgccccggccgctacatctgcacatgctccccaggttattacggcaacaactgccagtat
ggtgggccccgcgtgcccggtgcctgcctctcccacccatgccagaacaacggcagctgc
ctggagacggagcagggatacatctgcgaatgccaggagggctacactgggcaggactgt
cgagacaagctctcagagggctgtgagtgtcgcaacgggggcagttgtctggaggggaac
gtcaccatctgccagtgcccgcctgggttttttggtctcctctgtgaattcgaagttacc
accacaccgtgcaacatgaacacgcagtgcccagatggcgggtactgcatggagtatggc
gggagctacctctgcgtctgccacactgactatggcaccaaccacacgatgccatccccc
tgtgattctgagccctgcctgaacggggggtcctgcgaggttcatgacgactcgtacacc
tgcgagtgtcctcgaggcttccttggcaagcactgcgagaaagccaagccacggctctgc
agcacggggccctgtcgcaatgggggcacctgcagggaggcggatggcgagtaccactgc
acctgcccttaccgtttcaccggcaagcactgcgagatcggtaagccggacccctgtgcc
tcggggccctgccagaatgggggcacctgcttccactacattggcaagtacaagtgtgac
tgtcccccgggctacgctggccggcactgcgagatcgtgccctccccatgcttcctcagc
ccctgtgagaacggtgctacctgcgaggaccttgatgggggctacacttgcacgtgcccc
gtgggctatgtagggaagcactgccagtctgaggtcgactgtggcatccccagtgaggtg
aagcatgcccaggcctcgttcaactccaccaaggtgggctcgctggctgaataccagtgt
gagctgggctacaccctcagtcagcacaaccacccccgtgtctgccgcttgccaggcgtc
tggagtgatccccccgaatgtgatgagattgatgagtgctggtcccagccctgtctgaac
ggcggccagtgcaaggatcgcgttgccgagttcctgtgcctgtgtgaggcaggttacacc
ggccaccactgcgagtcggatgttgatgagtgccggtcagagccctgtaagaatggcggg
acctgccaggacctccctgcgtcctttgcttgctactgtcccgagggctttgtggggacc
cagtgcgaaacagaagtggatgcctgtgagtcaggcccttgccagaacggaggggaatgc
gagagctacgggggctcctacctctgcgtgtgcccagagggtttcttcggctaccactgt
gagacagccagtgacccgtgcttctccagcccctgcgggagcagaggctactgcctgcct
ggcaatggcacccacagctgcacctgcaaagtcagctacacaggcaagagctgcgaaaaa
gaattgctgccaccaacttcattaaaggtggaaagggtggaggacactggtgtgttgatt
tcttggcacccacctgaggacgcagccgccaggcaacacattgacggctacgccgtgacg
tacgtatccctcgacggctcttaccgcaggacagattttgtggaccgaagtcgttctgcc
caccaattgcgggcactagcctccggcagagcctacaatatttctgtcttttcagtcaaa
cgcaacgtgaacaacaagaatgatatcagcaggcctgtcatgctcaccacgcgcactaga
ccgcgtccggtggaaggctttgagatcatgaacgtgacggccagcgccatcacggtgcaa
tgggctctccaccggctcaagcactccaccgtcagtagggtgcgtgtctccatccgccag
ccaggggacctggcagaccgcaccgtggagctgaacagcagcgtggccaaatacaccttc
ctggacctgcagccaggagagaggtacatcatccatgtcacgacactgagcggcctgggg
acggaagaccacccctcagagagtctggccacagcccccttccacgtgtggacaaggccc
ctctctccccaaaacctcactgcctcccgtgtcaccgccacctctgtgtccatggtgtgg
gagcagccgcccactggcgctgtggaggggtacatcatcaatgtcaccactgctcagagt
gtgaagagccgctatgtgcccaatgggaagcttgtgtcctacacggtgcgggacctgctc
cctgggcagcggtaccggctgtcggtgacagctgtgcagaacacggagcaaggccaagtg
cacagcgagcccatccacctctacatcaccaccttgcagagggatggggctccggagaga
cggtggagccaagctggacacccccgggtcctgcgcaacaggctgcccccagctttcctg
cccgaactccgcttgctagcggatcacgacacagctgaggagccctcaccagcccccagg
ttcactgagctggtggatggcagagggaggatcagtgccaggttcggcaccacactgggc
aaatccatcactgtgaagacgcagccggaagctccagtgaagctggaaaacgtggaggtg
tccagccagggtagcctggcaatgcagctgcgcgaggcaaagagcaagagtgaggggcag
aactgctccatgaacccctgcaggaacggaggcacctgcaccagggacaccaagtcttac
cactgcgactgccgcccgggattcaagggccgtctctgcgagctggcctgcaagaaggtg
ccacactcgtgcacgcggctgtactcggaaaccaagtcattccccgtgtgggaaggaggt
acctgccactacctgtacaggagagtctacaaggtacaccaagatgtctgctacaaggag
agctgcgagagcaccggtgccaagaagacaaccagcagaaaaccaagcaacagtcacaca
ctgaagaagccatag
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