Rissa tridactyla (black-legged kittiwake): 128911399
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Entry
128911399 CDS
T09443
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtd03016
]
128911399 (TRUB1)
Enzymes [BR:
rtd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
128911399 (TRUB1)
Transfer RNA biogenesis [BR:
rtd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
128911399 (TRUB1)
Prokaryotic type
128911399 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
128911399
NCBI-ProteinID:
XP_054062189
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All DBs
Position
6:64425492..64463976
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AA seq
286 aa
AA seq
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MAAREAGGVVLGKSAEKLFSLSGLFAVYKPKGPTSAGVLNLLKEKLLAEAGVQTNGNKRN
QVLKIGHGGTLDSAAAGVLVVGIGKGTKMLRTMLAGSKKYTAIGLLGKATDTLDATGTVT
EEKPYDQITKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARRVR
VYSLSLQQFQPPLFTLDVECGGGFYVRSLVSDIGKELSTCATMQELTRTKQGPFTLEEHA
LHEDKWTIDEIARSLEHCTSLLPDEPSHKKLKTEHPGETAVSCEDK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagggaagcgggcggtgtcgtgctgggcaagtccgctgagaagctcttctct
ctgagcgggctgtttgccgtctacaagcccaagggccccacctcggccggcgtgctcaac
ctcctgaaggagaagctgctggcagaagctggtgtgcaaacaaatgggaacaaaagaaac
caggttttgaaaattggacatggtggaactttggacagtgcagcggcaggagttctggtg
gttggtattggaaaaggaacaaaaatgctgagaactatgttggcaggttccaagaagtac
actgccattggactactgggcaaagcgactgatacattagatgctacaggaacagtaact
gaagaaaaaccttatgaccagataacaaaaggagatcttgaaaacgtgctgcaaaagttc
acaggggacataatgcaggttcctccactctattctgctttgaagaaggatggagaaagg
ctatcaactctgatgaagagaggagaagcagtcgaagcaaagcctgctcggcgagtaaga
gtgtacagcctctctctccagcagttccagccaccactgttcacactggatgttgaatgt
ggtggtggcttttatgtcaggagcctggtcagtgacattggcaaagaactctctacctgt
gccactatgcaagagctgacccgaaccaaacaagggccatttacactagaggagcatgcc
cttcatgaagacaaatggacaattgatgaaattgcacgatccttagagcattgcacgtct
cttctcccggatgagccatctcataaaaaattgaagacagagcatcctggtgaaactgct
gtgagctgtgaagataagtga
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