Rissa tridactyla (black-legged kittiwake): 128911477
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Entry
128911477 CDS
T09443
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128911477 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128911477 (TRIP12)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128911477 (TRIP12)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
HECT type E3
128911477 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
Maestro_HEAT
Motif
Other DBs
NCBI-GeneID:
128911477
NCBI-ProteinID:
XP_054062428
LinkDB
All DBs
Position
6:complement(23984000..24063005)
Genome browser
AA seq
2067 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPENRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSAVLIPQEGDPERVNTSEKQKTGQVPKKDNSRGVKRSASPD
YRRTNSPSSAKKPKALQHTETSLETNKPHTKTKRRHLDQEQPKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTENLSCIKSGSAVESTGAEEKSAKLSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSSAVASASSTVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEPSKTSGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGED
EISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMK
EDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSS
HIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPK
VCTNGSGTLGTATTISTGTATAASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRL
PKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNMEPA
RTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLCT
ATEQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDTVSRDIR
LKRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGT
GSSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVR
GYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQ
YSLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGSKDCVGGKRGRAQTAPTK
TSPRNSKKHDELWHDGVCPSVLNPLEVYLISTPPENITFEDPSLDVILLLRVLHAISRYW
YYLYDNAICKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFD
TRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESV
MQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQE
GTKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKW
MLRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGC
SVEDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGF
ESVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSS
FDSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKL
PDYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagaatagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gctgtcttaataccacaagaaggagatccagagagagtcaatacttcagaaaagcaaaaa
acggggcaagtgcctaagaaagacaattctagaggagttaaacgcagtgctagtccagat
tacaggaggaccaattctcctagctctgctaaaaaacccaaagcacttcaacacactgaa
acttccttggaaactaacaagccacatactaaaactaagagaagacacttagaccaagaa
cagccgaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagct
gctggtagctcccgaagtcagaaaaggaaaaggacagagaatctgtcttgtataaagagt
ggttcagcagttgaatcaactggcgctgaagagaagtcagcaaaactctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttca
gcttctacatcatcctcctcctcttctgctgttgcctctgcttcttctactgttcctcag
ggtgccagagtgaaacagggaaaggaccagaataaggctagacgttcccgttctgcatcc
agccccagtccaagaaggagtagcagggacaaagaaccgagtaaaacaagtggctcttca
aagtttgactgggctgctcgattcagcccaaaagtcagtctgcctaaaacaaaactgtct
ctaccaggctcttccaagtcggagacatcaaaacctggaccttcaggactacaggctaag
ctagcaagtctaagaaaatccacaaagaagcgcagtgaatcaccacctgctgagctcccc
agtttgcggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcga
ggctctggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgat
cctgacaacaaccaggatggagttaactcttcagctgcccgtacagatgaggctccccag
ggagctgcagcttctagttctgttgctggggctgtaggtatgacaacctctggagaaagt
gagtcagatgattctgagatgggaagactacaagctctattagaggctaggggtcttcct
cctcacctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattgga
agtggagctagttctaaagcccaacagcttttacaaggtctccaagccactgatgaaagt
cagcaacttcaggcagtgattgagatgtgccagctgttggtcatgggcaatgaagaaaca
ttaggaggatttccagtcaagagtgttgtaccagctttgataacactgctgcagatggag
cacaactttgacattatgaaccatgcatgtcgggccttaacatatatgatggaagcactt
cccagatcatctgctgtagtggtagatgcaattcctgtcttcttggaaaagctgcaagtt
attcagtgcattgatgtggcagagcaggcgcttacagcgctggagatgttatctcgcagg
catagtaaagccattctgcaggcaggtgggttggcagactgtttgctgtatctggaattc
ttcagcataaatgcacagaggaatgcgctagctattgctgccaactgctgccagagtata
acacctgatgagtttcactttgtggcagactctttgccactgcttacacaaaggttaacg
catcaggacaaaaagtctgttgaaagcacttgtctctgttttgcacggctagtggacaac
ttccagcatgaggagaacttgctccagcaggttgcttccaaggacttgttaacaaatatc
cagcaactcttggtagtgacgcctcctatcctgagctcaggaatgttcatcatggtggtg
cgcatgttttccttaatgtgctccaattgtcctacacttgcagtccaacttatgaagcaa
aatattgcagaaacgcttcatttcctcctttgtggagcctcaaatgggagctgtcaagaa
caaattgaccttgttccacgaagtcctcaagaactttatgagcttacttctcttatctgt
gaactgatgccttgcctgccaaaagagggaatctttgctgttgatactatgctgaagaaa
ggaaacgcacaaaatacagatggtgcgatatggcaatggcgagatgacaggggcctttgg
catccctataacaggattgatagtcgaataatagaggcagctcatcaggttggtgaggat
gaaataagcctgtctacgcttgggcgtgtctatactatcgattttaactctatgcagcaa
ataaatgaggatactggaacagcacgtgccattcagcgaaaaccaaaccctttagccaat
acaaacactagtggacattcagaattgaagaaggatgatgctcgagcacaactaatgaaa
gaggacccagaactggcaaaatcctttatcaaaacactgttcggtgttctttatgaagta
tatagttcttcagctggacctgctgttagacacaagtgccttagagcaattcttaggata
atttattttgctgatgctgaacttctgaaggatgtgctgaaaaaccatgctgtttctagt
catattgcctccatgctgtcgagtcaagaccttaagatagtagttggagccctgcagatg
gcagagattttaatgcaaaagttacctgacatttttagtgtttacttcagaagagaaggg
gtgatgcatcaagtgaaaaacttagcagagtctgaggctttgttaacaagcccaccgaaa
gtatgcactaatggatcaggaacgctgggtaccgctacaacgataagtactggaacagca
actgctgccagtaatgcagctgcggatttgggctctcctagcttacaacacagccgggag
gattctttggatcttagcccacagggacgactgagtgatgttctaaagagaaaaagattg
ccaaaacgagggccaaggagaccaaaatactctcctccaagagacgatgacaaagtagac
aatcaagctaaaagccctacaactactcaatctcctaaatcttccttcttggcaagttta
aatcccaaaacgtggggaagattaagcacacagtccaacagtaataatatggaaccagca
cgaacagcaggagtaagtggtcttgcaagggctgcttccaaggataccatttcaaataac
agagaaaaaattaagggctggattaaggagcaagcccataaatttgtagaacgttatttt
agttctgaaaacatggatggaagcaatcctgcactaaatgtattacagagactttgcact
gcaactgaacaactcaacctccaggtggatggtggaacagagtgccttgtagaaatccgt
agcattgtctcggagtctgacgtctcctcatttgaaatccagcatagtgggtttgttaaa
caactgctgctttatttgacatctaaaagtgagaaagatactgtaagcagggatatcaga
ttgaaaagatttcttcatgtatttttttcttctccacttcctggagaagaaccccttgga
agattagagccattagaaaatgcacctttgttggcgttagtccataaaatgaacaattgc
ctcagtcagatggaacagtttcctgtcaaagtgcatgacttcccaagtggaaatggaaca
gggagcagtttttctcttaacagaggatcccaagctttaaaattcttcaatacacaccaa
ttaaaatgccaactgcaaagacatccagactgtgctaatgtgaaacagtggaaaggtgga
cctgtgaagattgacccgctggctttggtacaagccattgaaagataccttgtagttaga
ggctatggaagagttagagaagatgatgaggatagtgatgatgatgggtcagatgaagaa
atagatgaatctttggctgctcaattcttaaattcagggaatgtgagacatagactgcag
ttttacattggagatcacttactgccgtacaatatgactgtgtatcaagcagtcaggcag
tacagtttgcaagctgaggaggagagggagtctacagatgatgaaagcaacccattagga
agagctgggatttggacaaaaacgcatacaatttggtacaaacctgtgcgagaggatgaa
gatggtagtaaggactgcgttggtggtaaaagaggaagagcacaaactgctcccacaaaa
acctcccctagaaattctaaaaagcatgatgaattgtggcatgatggtgtatgcccttcg
gtattaaatcctctagaagtttacctcatatctactccacctgaaaacataacatttgaa
gatccatcattagacgttattcttcttttgagagttttacatgctatcagtcgatactgg
tattacttgtatgataatgcaatctgcaaggagataattccaacctcggagtttatcaac
agtaaactgacagcaaaagcaaacaggcagcttcaggatcctttggtaattatgacagga
aacataccaacctggctgacagaacttggaaaaacatgcccgtttttctttccatttgat
acccgtcaaatgctgttttatgtaactgcttttgatcgtgatcgagccatgcaaagactg
ctggatactaatccagaaatcaatcaatcagattctcaggatagcagagtggcaccacga
ctggacaggaaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtg
atgcaggatctaggcagttcaagagccatgttggaaatccagtatgagaatgaagttggc
acaggccttggccccacgctagagttctatgcacttgtatctcaggaactacagagagca
gacttaggcctttggaggggagaagaagtgactttagccaatccaaaaggaagccaggaa
ggtaccaagtatatccataaccttcaaggcctttttgcacttccttttggtagaacagcc
aagccagctcacattgcaaaagttaaaatgaagttccgctttctgggaaaactaatggcc
aaggcaatcatggattttagactggtggaccttcctcttggacttcctttttataaatgg
atgctacgacaggaaacttccttgacatcacatgatttgttcagtattgacccagtagtc
gccaaatcaatatatcaccttgaagatattgtaagacaaaagaaaagacttgaacaggac
aaaacacagaccaaagaaagtctacagtatgcattggaggctctgacaatgaatggctgc
tcagtggaagacttagggctggacttcacacttcctgggtttcctaatatagaactgaaa
aaagggggaaaagatacaccggtcaccatccacaatttagaggagtacctcagattggtt
atattctgggcactaaatgaaggtgttgccagacagtttgactcattcagagatggattt
gaatcagtcttccccctcagtcatcttcagtacttctatcctgaggagttggagcagctt
ttgtgcggtagtaaaacggacacttgggatgcaaagactttaatggaatgttgcaggcca
gatcacggttatacacatgacagtcgagcagtgaagtatctctttgaaattctcagtagc
tttgatagtgagcagcaaagactgtttcttcagtttgtgacgggtagccccagactgcct
gtaggaggctttcgaagtttgaatcctccattgacaattgtgcgcaagacatttgagtct
acagagaatccggatgatttcttgccctcagtaatgacttgtgtgaactatctcaaattg
ccggactattcaactattgagataatgcgtgaaaaactattgatagctgcaagagaaggg
cagcagtcattccatctgtcctga
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integrated database retrieval system
