Rissa tridactyla (black-legged kittiwake): 128911517
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Entry
128911517 CDS
T09443
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128911517 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128911517 (DHX36)
03012 Translation factors [BR:
rtd03012
]
128911517 (DHX36)
Enzymes [BR:
rtd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128911517 (DHX36)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
128911517 (DHX36)
Translation factors [BR:
rtd03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
128911517 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
AAA_23
Sir1
NPHP3_N
PhoH
Motif
Other DBs
NCBI-GeneID:
128911517
NCBI-ProteinID:
XP_054062497
LinkDB
All DBs
Position
6:complement(32221386..32242359)
Genome browser
AA seq
998 aa
AA seq
DB search
MRRAVAALRAGCRAAMSYEHRRDWGRGRGGDGGAAGSSSSSAGGHGGRGGGRGRHPSHLK
GREIGLWYARKQGQKSKETDRQQRAVVRMDERREEQIVQLLNTVQTKNEKEQEAMSWWSG
DEEGPTPEQPTKVKPDTEKAPVKQRPVLEKTFLDRDVEYLFEKNDQDTDLDEQLKEDLRK
KKSDPRYIEMQRFREKLPSYGMRQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIE
RGKGSTCRIVCTQPRRISAISVAERVAVERAEACGNGKSTGYQIRLQSRLPRKQGSILYC
TTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNIRLDLKVILMSATLN
AEKFSEYFDNCPMIHIPGFTFPVVEYLLEDVIEKLRYTPENTDRRPRWKKGFMQGHVSRP
EKEEKEEIYRERWPDYLRQLRGRYSASTIDALEMMDDDKVDLDLIAALIRHIVLEEEDGA
ILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA
TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGH
CYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLA
INHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDP
FVIPLGKEKVADARRKELSKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSSNT
LQMLHNMKGQFAEHLLAAGFVNSRDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSF
SKKRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCL
LFFGGDISIQKDKDQDTIAVDEWIVFQSPARIAHLVKNLRQELDDLLQEKIENPHPVDWN
DIKSRDTAVLTAIIDLITTQENEGARNYAPRFQSERYS
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgggcggtggcagcgctgcgagccgggtgccgggcggccatgagctacgagcac
cgccgcgactggggtcggggccgcggcggcgatggcggggccgctggttcctcctcctcc
tcggcggggggacacggcggccgcggtggcggccgggggcgccaccccagccacctcaag
ggccgcgagatcgggctgtggtacgcgcggaagcagggccagaagagcaaggagacggac
cggcagcagagagctgttgtgcgtatggacgaacgcagggaagagcaaattgtgcagctg
ttgaataccgtccaaactaaaaatgaaaaggagcaagaagccatgtcttggtggtctggg
gatgaagaaggacctactccagaacagcccacaaaagtgaaaccagatactgaaaaagct
cctgtaaaacagaggccagtcttggaaaaaacgtttcttgatcgcgatgtggaatatctc
tttgaaaaaaatgaccaagatactgatttagatgagcaacttaaagaagacttaagaaag
aagaaatcagatcctagatatattgaaatgcagagattccgagagaaactcccgtcatat
gggatgagacaggaacttgtaaaccttataaacaataatcgagtaactgtgataagtggt
gaaactggttgtggaaagacaacccaagttacacagttcattctggatgattacatagag
cgagggaaggggtctacatgcaggattgtttgtactcagcctaggaggatcagtgctatc
tcagtggctgagagagtcgcggttgaaagggcagaagcatgtggtaatggcaagagtaca
ggataccaaatccgtctacagagtcggttaccaaggaaacaaggttcaattttatactgt
accacaggaattgtcctacagtggctccagtcagataagcacttgtccagcattagtcac
gtagtccttgatgaaattcatgaaagaaatcttcagtcggatgttttaatgagcattatt
aaagatcttctgaatattcgtttggatctgaaagtaatactcatgagtgctactttaaat
gcagagaagttttcagagtattttgataattgtccaatgattcacatacctgggttcacc
ttccctgtagtggaataccttcttgaggatgtaattgagaagttgaggtatactccagaa
aacacagaccgtcggccacggtggaagaaaggtttcatgcaaggacatgtaagcagacca
gaaaaagaagaaaaagaggaaatctacagggaacgatggccagactatttaaggcagctg
cggggcaggtattcagcaagtactatagatgccttggaaatgatggatgatgacaaggtc
gaccttgatcttatagcagcacttatcagacacattgttttggaagaagaggatggtgcg
attctagtgtttcttccaggctgggacaacattagcactttgcatgatctcttgatgtca
caagtcatgtttaagtcagataggtttattatcatacctttacattcattgatgcctact
gttaaccagactcaggtttttaagaagaccccgccaggagtaaggaaaatcgtgattgct
accaacattgcagagactagcattacaatagatgacgtcgtgttcgttatagatggtgga
aaaataaaagaaactcactttgacacacagaacaacattagcacaatggcagcagagtgg
gttagtaaagctaatgccaagcagaggaaaggtcgagcaggaagagttcagccaggccac
tgctatcatctatacaatggattgcgtgctagccttctagatgattatcagttaccagag
atcttgaggacacctttggaagaactctgtttacaaatcaagattctaaagcttggtgga
attgcttattttctgagcaaactaatggatccaccatctcgtgatgctgtaatgttggcc
ataaatcatctaatggagctgaatgctttggacagacaagaagaactgactccactgggt
gtccatttagcacgattaccagtcgaaccacatattggaaaaatgatcctctttggagct
ttattctgctgcttagatccagtacttacaattgcggctagcctcagcttcaaagaccct
tttgttattcctctgggcaaagagaaagtagcagatgcaagaagaaaggaactgtcaaag
aacactaaaagtgatcatctaactgtggtgaatgctttcacgggctgggaagagactcgg
cgtcgtggtttcagaactgagaaagactattgctgggaatatttcctgtcttcaaatacg
ctgcagatgctgcataacatgaaaggacagtttgctgagcatctccttgcagctggattt
gtgaacagcagagaccccaaggatcccaaatctaataccaactcagataatgagaagttg
ctcaaagcagtcatttgtgctggtttatatccaaaagttgcaaagatccggccaagcttc
agcaaaaagagaaaaatggtgaaagtttgcaccaagacagatggaacagttaatattcat
cctaaatcagttaatgtggaagaaacagagttccattataactggcttgtgtaccatttg
aagatgagaactagcagtatttatttgtatgattgtacagaggtctccccatactgtctc
ttgttctttggaggagatatatccattcagaaggataaagatcaggataccatcgctgtg
gatgaatggattgttttccagtctccagcaagaatagcgcacttggttaagaatttaaga
caagagcttgatgatcttctacaagaaaaaatagaaaacccacatcctgtggactggaat
gatattaaatccagggatacagcagtactgacggctattatagacttaatcacaacacag
gagaatgaaggtgccagaaactatgctccacgattccagagtgaacgctatagttga
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