Rissa tridactyla (black-legged kittiwake): 128911533
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Entry
128911533 CDS
T09443
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128911533 (SOX2)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128911533 (SOX2)
BRITE hierarchy
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128911533
NCBI-ProteinID:
XP_054062539
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All DBs
Position
6:complement(2061413..2062360)
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AA seq
315 aa
AA seq
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MYNMMETELKPPAPQQTSGGGTGNSNSAANNQKNSPDRVKRPMNAFMVWSRGQRRKMAQE
NPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKK
DKYTLPGGLLAPGTNTMTTGVGVGATLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQ
HPGLNAHNAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALGSMGS
VVKTESSSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSAP
VPGTAINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctgaagcctcccgccccccagcaaacttcgggggga
ggcacaggcaactccaactcggccgccaacaaccagaagaacagcccggaccgggtcaag
cgcccgatgaacgcgttcatggtgtggtcccgcgggcagcggcggaaaatggcccaggag
aacccgaagatgcacaactccgagatcagcaagcggctcggggccgagtggaaactttta
tccgaggcggaaaagagacccttcattgacgaagccaagcggctcagggctctgcacatg
aaggagcacccggattataaataccgaccccggaggaaaaccaagaccctcatgaagaag
gataagtacacgttgccggggggcttactggcgccgggcaccaataccatgacgactggg
gtaggggttggggccaccttgggagctggggtgaaccagaggatggacagttacgcgcac
atgaacggctggaccaacggaggctatgggatgatgcaagagcagctcggctacccgcag
cacccgggcttgaacgcgcacaacgcggcgcagatgcagcccatgcaccgctacgacgtg
agcgccctgcagtacaactccatgaccagctcgcagacttacatgaacggatcgcccacc
tacagcatgtcttactcccagcaagggacccccggcatggccctgggctccatgggctcg
gtggtcaagacggaatccagctccagtccccccgttgtcacttcctcctctcactcaagg
gctccttgccaagctggggaccttcgggacatgatcagcatgtatctaccaggtgctgaa
gtaccagaaccagctgccccaagcagacttcatatgtcccaacactaccagagtgcacct
gttcctggcacagccattaatggcacactccctctatcacatatgtaa
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