Rissa tridactyla (black-legged kittiwake): 128911534
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Entry
128911534 CDS
T09443
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtd03009
]
128911534
03036 Chromosome and associated proteins [BR:
rtd03036
]
128911534
Enzymes [BR:
rtd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128911534
Ribosome biogenesis [BR:
rtd03009
]
Eukaryotic type
Pre-60S particles
Helicases
128911534
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
128911534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
128911534
NCBI-ProteinID:
XP_054062540
LinkDB
All DBs
Position
6:complement(37286166..37303077)
Genome browser
AA seq
709 aa
AA seq
DB search
MPEATRFSASSSEAESDSECPMETESSLESSRRRRKKEKKEKKSKRREKSRRRKAPTDES
EQSEDDTDSPKLKKSRSGVKQNGHTREESPENARLSSLSIKSTHKKRHSNSSETSSGDGD
SDQDQEMTEEQKEGAFSNFSISKGTVQLLQARGVTYLFPVQVKTFDPVYSGKDVIAQART
GTGKTFSFAIPLIEKLQGDSQERRRGRPPKVLVLCPTRELANQVAKDFKDITRKLTVACF
YGGTPYNGQIDLMRSGIDILVGTPGRIKDHLQNGKLDLTKVKHVVLDEVDQMLDMGFAEQ
VEDILRVAYKKDSEDNPQTLLFSATCPHWVYDVAKKYMKSRYEQIDLIGKRTQKAATTVE
HLAIECHWSQRAAVIGDVIQVYSGSHGRTIVFCETKKEANELALNASIKQDCQSLHGDIP
QKQREITLKGFRNGTFKVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAG
RTGICICFYQRKEEHQLRYVEQKAGITFKRVGVPTATDIIKASSKDAIRCLDSVPHTAIE
YFKESARWLIQEKGPVNALAAALAHISGATSIEQRSLLNSDAGFVTMILRCSEEINNMSY
AWRRLRELLGDDVDRKVNRMCFLKGKMGVCFDVPAADQKEIESRWEDSKQWRLCVATELP
ELVESQRGGGGGGNGRSFSSSRNGRRGSSGRNRFRGRGQKRSFDRAFDR
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagccacccggtttagcgccagcagtagcgaggccgagtcggattccgagtgc
cctatggagactgagtcatctctggagagcagccggcggcggcgcaagaaggagaaaaaa
gagaagaagtctaaacgccgtgagaaatctcggcggagaaaggcaccgacggatgaaagt
gagcagtcagaggatgacactgattccccaaaactcaagaaatcgcggagtggggttaag
caaaacggtcacacgagagaggaaagcccagagaatgcgagattgtcttctttaagcatt
aaatccacccacaaaaaaaggcacagtaattccagtgaaacatcgagtggtgatggtgac
agtgaccaagaccaggagatgactgaagaacagaaagagggtgctttctccaatttttct
atttccaaagggactgttcagctccttcaagctcgaggagtgacgtacctgtttcccgtg
caagtgaagactttcgacccagtatattctggcaaagatgtaattgctcaggcacgaact
ggaacagggaaaacattctcttttgctattcccttaattgaaaagcttcagggagactca
caggaaagaagaagaggccgtccaccaaaggtactagttctttgtcctacaagagagctg
gcaaaccaggttgccaaagatttcaaggacatcacaagaaagctaacagtagcttgtttt
tatggaggaactccgtataatggacaaattgatctcatgagaagtggcattgacattttg
gttgggacacctggtcgaatcaaagaccatcttcagaatggcaagctggatcttaccaag
gtgaaacatgttgtacttgatgaagttgaccagatgctggacatgggatttgctgagcaa
gtggaagacattttacgagttgcatacaaaaaggattctgaagacaatccccagacacta
ctgttttctgcaacttgcccacactgggtgtacgatgtggctaagaaatacatgaagtct
agatatgaacagattgaccttattgggaaaagaactcaaaaggctgctacaacagtagaa
catttggcaatagagtgtcactggtctcagagagctgcagttattggagatgtcattcag
gtctacagtggtagccatgggaggacgattgtgttttgtgagaccaaaaaggaggcaaac
gaactggctttaaatgcttcaatcaaacaggattgccagtcattgcatggtgacattccg
cagaagcaaagagagatcacgctgaaaggttttagaaatggtacatttaaagttctggtt
gcaaccaacgtagctgcccgtggtttagatatccctgaagttgacctggttgtacaaagt
tcaccaccaaaggatgtggagtcctatatccatcgttctggacgcacaggtcgagctggg
cggactgggatctgtatctgtttttatcagcgaaaggaagaacatcagctaagatatgtg
gaacaaaaagcgggcattacattcaagcgtgttggtgttcctactgcaacagatataata
aaggcttccagcaaagatgccatcagatgtctggattctgttcctcatactgctattgag
tatttcaaagaatctgctcggtggctaatacaagaaaagggaccagttaatgccctggct
gcagctctagcccatatttcaggtgctacttccattgaacagcgttccctgctgaactca
gatgcgggatttgttacaatgatactacgctgctctgaagaaataaacaacatgagctat
gcttggcgaagactgcgagaactgctgggtgatgatgttgatagaaaggtgaacagaatg
tgtttcctcaagggaaaaatgggtgtgtgctttgatgttcctgcagcagaccaaaaggaa
atagagtcaagatgggaagattcaaaacagtggcgtttgtgcgtggcgactgaattacca
gagttagtagaatcacagcgaggaggaggaggtggaggaaacggccgaagcttctccagc
tccaggaatgggcggcgtggtagctctggtagaaacagattcagaggcagaggccagaaa
cgaagttttgacagagcatttgatcgttaa
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