Rissa tridactyla (black-legged kittiwake): 128911663
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Entry
128911663 CDS
T09443
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04510
Focal adhesion
rtd04520
Adherens junction
rtd04810
Regulation of actin cytoskeleton
rtd04820
Cytoskeleton in muscle cells
rtd05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128911663 (VCL)
04520 Adherens junction
128911663 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128911663 (VCL)
04810 Regulation of actin cytoskeleton
128911663 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128911663 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtd04812
]
128911663 (VCL)
04147 Exosome [BR:
rtd04147
]
128911663 (VCL)
Cytoskeleton proteins [BR:
rtd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128911663 (VCL)
Exosome [BR:
rtd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128911663 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
DASH_Spc34
Motif
Other DBs
NCBI-GeneID:
128911663
NCBI-ProteinID:
XP_054062873
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All DBs
Position
6:complement(49534137..49595274)
Genome browser
AA seq
1137 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAI
RQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQG
LDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMAEARKVA
ELCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNR
AVANTRPVKAAVHLEGKIEQAQRWIDNPTVADRGVGQAAIRGLVAEGRRLANVMMGPYRQ
DLLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKTRMQEAMTQEVSDVF
SDTTTPIKLLAVAATAPSDAPNRDEVFDERAANFENHAARLGATAEKAAAVGTANKTTVE
GIQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQE
PDFPPPPPDLEQLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEAINQPMM
MAARQLHDEARKWSSKPDVTVINEAAEAGVDVDEEDDADVEFTLPSDIEDDYEPELLLMP
TNQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQ
CAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRT
NISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttccacacgcgcaccatcgagagcatcctggagccggtggcccagcaaatc
tcccacctggtcatcatgcacgaagagggggaggtggacggcaaggccatccccgacctc
accgcccccgtctcggccgtgcaggccgctgtcagcaacctggtgcgggttggaaaagag
actgtgcagacaacagaagaccagatcttgaaaagggatatgccaccagcatttatcaag
gtggagaatgcctgcaccaaacttgttcgggcagcccagatgctgcaagcagatccttat
tcagtaccagctcgtgactatctcattgatggatcaagaggcatcctttctggaacatca
gacttacttctgacattcgatgaagcggaggtccgtaaaatcatccgtgtctgcaaagga
atattggagtatctgactgtggcggaagtagtagagactatggaagatttggtgacatac
acaaagaatctagggccaggaatgacaaagatggccaaaatgattgatgagagacaacag
gaattaacgcatcaggaacatagggttatgctggtaaactccatgaatactgtgaaggag
ctattgccagtacttatttcagctatgaagatttttgtaaccacgaaaaattctaaaagt
cagggaatagaagaagcattgaaaaatcgtaatttcacagtagagaaaatgagtgctgag
ataaatgaaataatccgtgtattacaactcacttcctgggatgaagatgcctgggcgagc
aagaaggatactgaagccatgaaaagagcattagccttaatagattcaaagatgaaccag
gcaaaaggttggctgagagatccaaatgcacctccaggggatgctggtgagcaagcaata
aggcagatccttgatgaagctggaaaagcgggagaactgtgtgccggcaaagaacgcaga
gagattctgggaacatgcaaaactctgggccagatgactgatcaactggctgacctcaga
gctagaggacagggtgctacacccatggctatgcagaaggcgcagcaggtgtcacaaggt
ctggatttgctcactgcaaaagtggagaatgcagcccgcaaattggaggccatgacaaac
tctaagcaggcaattgctaagaagattgatgctgctcagaattggcttgcagatcctaat
gggggcagtgaaggagaagaacatattcggggaattatggctgaagcaaggaaagtcgca
gaattatgtgaggagcctaaagaaagagatgatatccttcgttccttgggggaaatctct
gctttgacagctaagctgtcagatctgcgacgacatgggaaaggtgactctcctgaggcc
cgtgcgttggctaagcagatagctacgtcacttcagaatttacagtccaaaacaaacagg
gctgtagcaaacacaaggccggtgaaagcagctgtccatttggagggcaagattgagcaa
gctcaaaggtggatagacaatcctacagttgctgatcggggagtaggccaggcagcaatt
cggggtctggttgcagaaggtcgtcgtttagccaacgtcatgatgggaccttaccgtcaa
gacctgcttgccaaatgtgaccgtgtagaccaactggctgctcagctagctgacctcgca
gcaagaggggagggagaatctcctcaggccagggcaattgctgctcagcttcaggactcg
ctgaaggatcttaaaacacggatgcaagaggcaatgacccaggaggtttctgatgttttt
agtgacaccacaactcctattaaattattagcagtggcagccactgctccctctgatgct
cccaatagagatgaggtgtttgatgaaagagcagcaaactttgaaaaccacgctgccagg
ctgggagctacagcagaaaaagcagctgcagtcggaactgcgaataaaactactgtggag
ggcattcaagcaacggtgaaatcagcaagggaacttaccccacaggtagtatcagctgct
cgtatcctcctgagaaatcctggaaatcaagctgcttatgaacattttgagacgatgaaa
aaccaatggattgataatgtagaaaaaatgacagggttggtggatgaagccattgatact
aaatctctgttggatgcatcggaagaggctattaagaaagatcttgataaatgtaaagtt
gccatggccaacatgcaacctcagatgctggtagctggtgccaccagcattgctagacga
gcaaaccgcatcctactggtagcgaaacgggaggttgaaaattcagaagaccctaaattc
cgtgaggcagttaaagcagcctctgatgagctgagcaaaactatatcaccaatggtaatg
gacgctaaagctgtggcaggcaacatttctgatcctggtttgcagaagagtttcttggat
tctggatacagaattctgggagctgtggccaaagtcagagaagccttccagcctcaagaa
ccagatttcccccctcctcctcctgaccttgagcagcttcatctgactgatgagcttgct
cctccaaaaccaccgcttccagagggtgaggttcccccacccagaccaccaccacctgaa
gaaaaggacgaagagttcccagagcagaaggcaggagaagctattaatcagcccatgatg
atggctgctaggcagttgcatgatgaagcccggaaatggtctagcaagcctgatgtgact
gtgattaatgaagcggctgaggctggtgtagatgtagatgaggaggatgatgcagatgtt
gaattcactctcccctctgacattgaagatgattacgagcctgagctgctgttaatgcca
accaatcagcctgttaaccagcccattctggctgctgctcagtctctacatcgggaagca
accaagtggtctagtaagggtaacgacatcattgctgctgctaaacgaatggcgcttcta
atggccgagatgtcgcgcctggtgagaggagggagtggaaacaagcgtgcccttattcag
tgtgcaaaggatattgctaaggcctcggatgaagtcactcgactggccaaagaggtggca
aagcagtgcaccgacaagcgcatcagaacaaacctgttgcaggtctgtgagcgaatccca
accatcagtacacaactcaaaattctttccaccgtcaaagctaccatgctgggcagaact
aacatcagcgatgaagagtcggaacaggcaacggagatgttggttcataatgcccagaac
ctcatgcagtctgtgaaggaaactgtgagagaagctgaagccgcatccattaagataaga
acagacgctggattcactcttcgctgggtcagaaagaccccatggtatcagtaa
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