Rissa tridactyla (black-legged kittiwake): 128911869
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Entry
128911869 CDS
T09443
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtd03021
]
128911869 (BTAF1)
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
128911869 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
Vac14_Fab1_bd
HEAT_2
TPR_Trm732_C
ARM_ECM29
Cnd1
Motif
Other DBs
NCBI-GeneID:
128911869
NCBI-ProteinID:
XP_054063355
LinkDB
All DBs
Position
6:complement(55824902..55878643)
Genome browser
AA seq
1916 aa
AA seq
DB search
MLLSTTSVCFLSRLTLICSSCQQTVLYWFQWTAITKHTDPFLLLASVLLGLQFIIIPAST
QCICPTTNIFPALICVRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVL
VYLRSTNWDTRIAAGQAVEAIVKNVPEWNPTPRAKQEPGSESPMEDSPSTDRLRFDRFDI
CRLLKHGASLLGSAGAEFEVQDDKSGEIDPKERIARQRKLLQKKLGLDMGAAIGMNTEDL
FNDEDLDYSPSSVSLVNKQPTLQAAELIDSEFRAGMSSRQKNKAKRMAKLFAKQRSRDAV
EANEKSNDSTDGEPEEKRRKVANVVINQPATDSKTLVENAPEEANEWPLESFCEEVCNDL
FNPSWEVRHGAGTGLREILKAHGKSGGKMGDSSLEEMIQQHQEWLEDLVIRLLCVFALDR
FGDFVSDEVVAPVRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIK
YALAVRQDMINTLLPKVLPAIIEGLQDLDDDVRAVAAASLVPVVESLVQLQSQKVPFILN
TLWDALLELDDLTASTNSIMILLSSLLTYPQVRKCSIQQSLTVLVPRVWPFLHHTISSVR
KAALETLFTLLSTQDQSSSTWLTPILQDMLRHIFQFCILESNQEILDLIHKVWLELLNKA
SVQYVVAAACPWMGAWLCLMMQPSHLPIDLNMLLEVKTRSKEKAGAKLRQGQTQNKEVIQ
EYIAGADSIAEDPATRDYVVMRARMMAAKLLGALCCCICDPGVNTVTQEIKPAESLAQLL
LFHLNSKSALQRISVALVICEWAALQKECRTVAICVQPRLLGVLSEHLYYDEIAVPFTRM
QNECKQLISLLADAHIDIGNRVNCSVFTIDQANELVTSVFNEVTSSFTLNPKILQQLDSK
RQQVQMTVTETNQEWQVLHLRVHTFAACAVVNLHQLPEKLNPVIKPLMEAIKKEENTLVQ
NYVASCIAKLLQQCTTRSPCPNSKIIKNLCNSLCVDPHLTPLAACPAQPQSSHENSKGPN
SDKDGMHHTVTKHRGIITLYRHQKAAFAITSRRGPTPKAPKAPIADLPTGSSGSIPTELD
EAQKPYVVQRRGAEFALSTIAKHFGAEMATGLPHLWDAMVGSLRNNIHTNNFDRKSLLEK
GDAPAQELVNSLQVFETTAASMDTQLHPLLIQHLSHLYMCLQHPSTAVRHMAARCVGVMS
KIATMETMNIFLEKVLPWLGAIDDNTKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGR
MSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIRMKAKERHFLEQLLDGKKLE
NYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCLRAQ
EYARTKLVDSVPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQHQVK
RHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGT
PIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMEALHR
QVLPFLLRRMKEDVLQDLPPKIIQDYYCILSPLQVQLYEDFAKSRAKCDIDETVSSISLN
EETEKPKLKATGHVFQALQYLRKLCNHPALVLTTQHPEYKRITEQLAAHNSSLRDIQHAP
KLSALKQLLLDCGLGNGGSSESGTEAVVAQHRVLIFCQLKSMLDIVEHDLLRPQLPSVTY
LRLDGSIPAGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDL
QAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENASLQSMGTEQL
LDLFTLDKDGKTEKADTSTSSGKASMKSVLENLGELWDQEQYDTEYSLENFMHSLK
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atgctgttatcaaccaccagcgtttgcttcctctccaggctgactcttatttgctccagt
tgtcagcagaccgtgctttactggttccagtggacagcaattaccaaacatacagatccc
tttcttcttcttgcgagtgttttgcttggactgcagtttatcatcataccagccagtact
cagtgcatatgccccaccaccaatattttccctgcccttatttgtgtcaggcttgatcgt
ctctttattttactggacaccggtacaacaccagtaacaagaaaagcagctgcacagcaa
cttggggaggtagtgaaactgcaccctcatgaactgaataatctcttatctaaagtgttg
gtgtatttaagaagtacaaattgggatactcgtattgcagctggccaggctgttgaagca
atagtgaaaaatgtacctgagtggaatccaactccaagagcaaaacaagaaccaggttca
gaaagtcctatggaagattcaccttcaacagatcggttgcgttttgacagatttgatata
tgtcggttgttaaaacatggtgcatctcttcttggttctgctggtgcggaatttgaagtt
caagatgataaatcaggtgaaattgatcctaaagagaggatagcacgacagaggaaactg
ttacaaaagaaactcggcttagatatgggtgctgcaattgggatgaatactgaagatctg
ttcaatgatgaagatctggactattctccttcttcagtttcactagtaaataaacaacct
actcttcaggctgctgagttaattgactcagaatttcgagctggcatgagcagtagacaa
aagaataaagccaaaagaatggctaagctgtttgcaaagcaaagatccagagatgcagtg
gaggctaatgagaagagcaatgatagcactgatggggaaccagaagaaaagagaagaaaa
gttgcaaatgttgtcatcaaccagcctgccacagactcaaaaactttggtagaaaatgct
ccagaagaggcaaatgaatggcctctggaaagcttctgtgaagaggtgtgcaatgatctc
tttaacccttcttgggaggttcgacatggtgcaggtaccggactgagggagatacttaaa
gctcatggtaaaagcggtggtaaaatgggagacagctctttagaagaaatgattcagcag
catcaggagtggctagaagacctggttattagactcctttgtgtgtttgcattagacaga
tttggagactttgtttcagatgaagtggtagcaccagtacgtgagacttgtgctcagact
ttgggagtagtcttgaaacatatgaatgagactggagttcataaaactgtggatgttctc
ctgaagctgcttacacaggaacagtgggaagtgagacatgggggtctcctaggaataaag
tacgctttggcagtacgtcaggacatgatcaacactttattgcctaaagtgttgcctgca
ataattgaaggtctccaagatctggatgatgatgtccgagctgttgctgcagcatcttta
gtaccagtagtggaaagcctcgtccaacttcagtctcagaaggtgccttttattcttaat
accttgtgggatgcacttctggagttggatgacttgacagcttccacaaacagtatcatg
atccttctttcttcccttctgacttaccctcaggtccgcaaatgcagtattcagcagtca
ctcacagttttggtcccacgtgtgtggcccttcttgcatcacactatatcttctgtccga
aaagcagcactggaaacattattcacactgctgtctacccaagaccagagctcttcaaca
tggctgactccaattctgcaagacatgttgaggcacatatttcaattttgtatcttagaa
agcaaccaagaaattctggatcttattcataaggtatggctggaactgttaaacaaggcg
tctgtacagtatgtggttgcagctgcttgtccgtggatgggagcctggctctgcttaatg
atgcagccatctcatttgcccattgacttaaacatgttgctagaagtaaaaaccagatca
aaagaaaaggctggtgctaaactgcgtcaaggtcaaacccagaataaggaagtgattcag
gaatatattgctggggcagacagcattgcagaagatccagcaaccagagattatgttgtc
atgcgagctcggatgatggcagcaaagttgctcggagcactttgttgttgcatttgtgac
ccaggtgtaaatactgttactcaagaaataaagccagctgaatcattagctcagctactg
ctcttccacttgaattctaaatctgccttgcagaggattagtgttgcattagtaatctgt
gagtgggcagccttgcaaaaggagtgtagaactgtggccatttgtgtgcaacctcgtttg
cttggggtcctttctgaacatctttattatgatgaaattgctgttccttttacacgaatg
cagaatgaatgtaaacaactcatctcactgttagctgatgcacacattgacattggaaac
agagtaaactgcagtgtatttacaatagatcaagctaatgagctggttacttctgttttc
aatgaggtgacatcatcctttactttgaatcctaaaattctgcagcagttggacagtaaa
cgacaacaagtccaaatgactgttacagaaacaaatcaagaatggcaagtgttgcatctg
cgagtccatacatttgctgcatgtgcagttgtgaacttgcatcaacttccagaaaaacta
aatcctgttataaaacccttaatggaagctatcaaaaaagaggagaatacactggtacaa
aactatgtggcttcatgcatagctaagttacttcagcagtgtacaacaaggtctccttgc
cccaactcaaagattataaaaaatctctgcaactccctctgtgtggatccacatcttact
ccactagcagcatgtcctgcacagcctcagagtagccatgaaaactcaaaagggcccaac
tctgataaagatgggatgcatcatacagttacaaagcacaggggaataattacactgtac
agacatcagaaagctgcttttgccatcacaagtcggcgaggtcctactccaaaagctcca
aaagccccaattgcagatcttcctactggtagtagtggaagcattcctacggaacttgat
gaggctcagaaaccttatgttgtacagagaagaggagctgaatttgccttatctactata
gctaaacattttggtgctgaaatggcaacgggattgccacatctctgggatgctatggtt
ggttcattaaggaacaacattcacacaaataattttgaccgaaagtccttactggaaaaa
ggagatgctcctgcccaggagctagtaaattctttacaggtttttgaaacaacagcagct
tcaatggatactcagctacatcctctgttaatacagcatttgtctcatctttatatgtgc
cttcaacatcccagcactgcagtgagacacatggctgctcgttgtgtaggtgttatgagc
aaaatagctaccatggaaacaatgaatatctttctagagaaagttctaccatggttggga
gcaatagatgacaacaccaaacaagaaggtgcaattgaagcacttgcatgtgtaatggag
cagctggatgttggtattgttccatacattgttcttctagtggttccagttctgggtaga
atgagtgatcagacagacagtgtacgtttcatggctactcagtgctttgcaacactaatt
agactaatgcctcttgaggctggtataccagatccaccaaacatgtctgaagaattaatc
cgaatgaaagctaaagaacgtcactttctggaacaattattggatggaaaaaaactggaa
aactataaaattccagtaccaatcaaagcagaactcagaaaatatcagcaggatggagtg
aactggctggcgtttctcaataaatacaaacttcatggaattctttgtgatgacatgggt
ttaggaaaaactttgcaatccatttgcattcttgcaggtgatcactgcctcagggctcag
gaatatgcaagaacaaaactggtggacagtgttcctcttccctccttggtggtgtgccct
cctacactcacaggacactgggtggatgaagtgggcaaattttgctcaaaagaatatctt
aatcctttgcactatacaggacctcctactgagagagcaagattacaacaccaggtgaaa
agacataatctcatagtggcttcatacgatgttgtgagaaatgacattgatttcttcaga
aatattaagtttaattactgcattcttgatgaaggccacgtaataaaaaatggaaaaaca
aagctgtcaaaagcagtaaaacagctgactgccaattacaggataattctttctgggaca
ccaatccagaacaacgtcttagagttgtggtcgctgtttgacttccttatgccaggattt
ttgggtactgaacgccaatttgcagctcgttatggcaaaccaatactggcaagtagagat
gcccgaagctccagtcgagaacaagaagctggggttcttgccatggaagcactgcaccgt
caagttttgccattcctgctgaggagaatgaaagaggatgtactgcaggatcttccaccc
aaaattattcaagattattactgtattctcagtcctctacaggttcagctttatgaagat
tttgccaagtctcgtgccaaatgtgatattgatgaaacagtttcttccatttcactgaat
gaggaaactgaaaaaccaaagcttaaagctacaggtcatgtatttcaggcattgcaatac
ttacggaagctatgcaaccatccagcgttagtgttaacaacacaacatccagaatataaa
agaattacagagcaacttgcagctcataattcatcacttcgagatatccaacacgcacct
aagctgtctgctttaaaacaactgctgctagactgtggtttggggaatggtggatcttca
gaaagcggtacagaagctgttgtggcccagcacagagtacttatcttctgtcaacttaaa
agtatgctggatatagtggagcatgaccttctcagacctcagttaccttcagttacttac
ttacgactagatggcagcatacctgctggtcagaggcattccattgtttcacggtttaat
aatgacccatctatagatgttcttttgctcaccactcatgttggtggattgggacttaac
ttaacaggggctgatacagtagtatttgtggaacatgactggaacccaatgagagacctg
caagccatggatcgggcacatcgcattgggcagaaacgtgttgttaatgtatatcgcctg
ataaccaggggaactctagaggagaagatcatgggtcttcaaaagttcaaaatgaatatt
gcaaatacagtgatcagccaagaaaatgcaagcctacagagcatgggaacagaacagctt
cttgatctgttcactcttgacaaggatggaaaaactgaaaaagcagatacctctacctct
tctgggaaagcgtcaatgaaatcagtactcgaaaaccttggagaactatgggatcaagaa
cagtatgacactgaatacagtcttgaaaactttatgcattcattaaagtaa
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