Rissa tridactyla (black-legged kittiwake): 128911946
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Entry
128911946 CDS
T09443
Symbol
FARSB
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128911946 (FARSB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rtd01007
]
128911946 (FARSB)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtd03016
]
128911946 (FARSB)
Enzymes [BR:
rtd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
128911946 (FARSB)
Amino acid related enzymes [BR:
rtd01007
]
Aminoacyl-tRNA synthetase
Class II (U)
128911946 (FARSB)
Transfer RNA biogenesis [BR:
rtd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128911946 (FARSB)
Prokaryotic type
128911946 (FARSB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Glyco_hydro_77
Motif
Other DBs
NCBI-GeneID:
128911946
NCBI-ProteinID:
XP_054063551
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All DBs
Position
6:complement(21482894..21522035)
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AA seq
589 aa
AA seq
DB search
MPTVSVKRDLLFQALGRTYTDEEFNDLCFEFGLELDEITSEKDIISKEKGEEKAKGASET
ILYKIDVPANRYDLLCLEGLVRGLQVFKERINLPRYEKIIPPEGEGQRLIITGETVHVRP
HAVAAVLRNITFTKERYDSFIDLQEKLHQNICRRRALVAIGTHDLDTISGPFTFTAKPPS
EIKFKPLNQSQEYTASQIMDLYRTDSHLRHYLHLIENKPLYPVIYDSNGVVLSMPPIING
DHTKISVKTRNVFIECTATDITKAKIVLDIIVTMFSEYCEKPFSVEAAEVVYPNGKTHIY
PELAYRKEKVKPELINKKIGISETPSSLAKLLTRMCLKSHVIGNGNNIEIEIPPTRADII
HACDIVEDAAIAYGYNNIQMTIPKTYTIANQLPLNKLTELLRLDLAAAGFTEALTFALCS
QEDIADKLGMDISATKAVRIANPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISD
IVVKDPNTDVGARNYRHFCAVYYNKSPGFEIIHGLLDRVMQLLEVPPSEENGYTIKATEG
SAFFPGRCAEIFAKGQSIGKLGVLHPDVITKFELTMPCSALEINIEPFV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagcgtgaagcgggacctgctcttccaggcgctgggcaggacctacact
gatgaagaatttaatgacctttgctttgagtttggtttggagcttgatgaaattacatct
gagaaagacataataagtaaagagaaaggtgaagaaaaggcaaagggtgcatctgaaacc
attctctataaaattgatgttcctgccaaccgttatgatcttctttgccttgaagggttg
gtccgaggattgcaggtctttaaagaaaggataaatctccctaggtatgaaaaaataata
ccacctgagggtgaaggtcagaggctgattatcactggagagactgtccatgtccgtcct
catgccgtagctgcagtccttcgtaatataacttttaccaaggaacgttatgatagtttc
attgacctccaagaaaaactacaccaaaatatttgcaggagaagagcgttagtagcaata
ggtacccatgacttggacaccatctctggtccatttacttttacagctaaaccaccttct
gaaattaaattcaagcccttgaatcaatcccaggagtacacagcttcacaaattatggat
ctgtataggactgacagccaccttcgacactatttacacctaatagaaaacaagccactt
tatcctgtcatttatgacagcaacggtgttgttctgtccatgccaccaatcatcaatgga
gatcatacaaaaataagcgtaaaaaccagaaatgtgtttattgaatgtacggccacagat
attacaaaggcaaaaattgttcttgatattatagtcacgatgtttagtgaatattgcgag
aagccattcagtgttgaagcagcagaagtcgtttatcctaatgggaagacccacatctat
ccggaactggcttaccgaaaagagaaggtgaaaccagaacttattaacaagaaaataggc
atcagtgagactccatcaagccttgcaaagctgctgactaggatgtgtttgaagtcacac
gtcatagggaatgggaacaatatagagattgaaatccctcctaccagagcggacattatc
catgcatgtgatatcgtagaagatgcagcaatagcttatggttataacaacattcagatg
actattccgaaaacgtacaccatagctaatcaactccccctcaataagctcacagaactt
ctgagactggacttggcagctgctggattcactgaagcactcacttttgccctgtgttct
caggaagacattgcagataaacttggcatggatatctctgcaacaaaagcagtgcgcata
gcaaaccccaaaactgcagaatttcaggtggcacgtacaaccctccttcctgggctcctg
aaaactattgctgctaaccgaaagatgcccttgcctctgaaactctttgagatctctgac
attgtagtaaaagatcctaatacagatgtaggtgcaagaaactacaggcatttctgtgca
gtttattacaacaagagccctgggtttgagattatccacggtttgctggacagggtcatg
cagcttcttgaagtaccaccaagtgaagagaatggctacacaatcaaggcaactgaaggc
tctgctttctttcctggtcgctgcgccgagatctttgccaaaggtcaaagcattgggaaa
cttggagtcctacaccccgatgttatcaccaagtttgagctcaccatgccgtgctctgcc
ctagagatcaatattgagccctttgtgtga
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