Rissa tridactyla (black-legged kittiwake): 128911960
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Entry
128911960 CDS
T09443
Symbol
BTRC
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04114
Oocyte meiosis
rtd04120
Ubiquitin mediated proteolysis
rtd04218
Cellular senescence
rtd04310
Wnt signaling pathway
rtd04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128911960 (BTRC)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128911960 (BTRC)
04340 Hedgehog signaling pathway
128911960 (BTRC)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
128911960 (BTRC)
04218 Cellular senescence
128911960 (BTRC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128911960 (BTRC)
03036 Chromosome and associated proteins [BR:
rtd03036
]
128911960 (BTRC)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128911960 (BTRC)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
128911960 (BTRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_IFT122_1st
NBCH_WD40
F-box
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR11_2nd
Beta-prop_VPS8
Beta-prop_Nup120_160
F-box_5
DUF4508
Motif
Other DBs
NCBI-GeneID:
128911960
NCBI-ProteinID:
XP_054063574
LinkDB
All DBs
Position
6:complement(58193660..58317921)
Genome browser
AA seq
657 aa
AA seq
DB search
MDPAEAVLQEKALKFMVSTFPLPPLPSYMEADEMEKQQYCLASTIPRIHMPKDGFQLISS
GYQAWLKQCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALPAFQNSSEREDCNNDEPPRK
IIPEKNSLRQTYNSCARLCLNQETVCLGSTAMKTENCVAKTKLANGTSSMIVPKQRKLSA
SYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDFITALPARG
LDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLSERRGW
GQYLFKNKPPDGTAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYC
LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVW
DVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAA
VNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTI
RLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCL
RTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQAESTRSPSRTYTYISR
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggacccggccgaggccgtgctgcaggagaaggccctcaagttcatggtctcaactttc
cccctgcccccccttccttcttacatggaagcagatgaaatggagaagcagcagtactgc
cttgcaagtaccataccccgaatacacatgccaaaagatggattccaacttatatcttct
ggataccaagcatggctaaagcagtgctctatgcccagatctctgtggctgggctgctcc
agcctggcggacagcatgccctcgctgcgatgcctgtataacccagggactggcgcactc
ccagctttccagaattcctctgagagagaagactgtaataatgatgagccccctaggaag
atcattcctgagaagaattcacttagacagacctacaacagctgtgccagactgtgctta
aaccaggaaacagtatgtctaggaagcactgctatgaagactgaaaattgtgtggccaaa
acaaaacttgccaatggcacttccagtatgattgtgcccaagcaaagaaagctgtctgcg
agctatgagaaggagaaggaactctgcgtcaagtattttgaacagtggtccgagtctgac
caggtggagtttgtggagcacctcatctcccagatgtgtcactaccagcacggacatata
aactcatacctcaaacccatgttacagcgggacttcatcactgcactgccagctcgggga
ttggatcacattgctgagaacattctgtcatacctggatgccaaatcgttgtgtgctgct
gagctggtgtgcaaggagtggtaccgggtgacgtcggacggcatgctgtggaagaagctc
atcgagagaatggtcaggacagactcactgtggaggggcttgtcagagaggagaggatgg
ggacaatatctatttaaaaataaacctcctgatgggactgcaccacccaactccttctac
agagcactttaccccaaaattatacaggacatagagacaatagagtcaaactggcggtgt
ggaaggcacagtttacagaggatccactgccgaagcgagacaagcaaaggggtttattgt
ttacagtatgatgatcagaagatagtaagtggcctacgagacaatactattaagatctgg
gataagaatacattggaatgcaagcgaattctcactggacacacgggttctgtcctgtgc
ctccagtacgatgaacgggtgatcattactggatcttcggactcaacagtcagggtgtgg
gacgtgaatgcgggcgagatgctgaatacgctgattcaccactgcgaagcagtactgcac
ctacgcttcaataatggcatgatggtgacatgttccaaagaccgttccattgccgtgtgg
gacatggcttcaccaacagacatcaccctgaggagggtgctagtagggcaccgagctgcc
gtcaacgtagtggactttgatgacaagtacattgtatcagcatcaggtgacagaactata
aaggtatggaacactagtacctgcgaatttgtgcgcaccttaaatggccacaaacgaggc
attgcatgtctgcagtacagagacaggctagtagtgagcggctcttcagataatactatc
aggctgtgggatatcgagtgtggggcatgtttacgagtactggaaggccatgaagagttg
gtgagatgcatacgctttgataacaagaggatagtcagtggagcatatgatgggaaaatt
aaagtatgggatcttgtggctgctttagaccctcgtgctccagcagggaccctctgcttg
cgaacccttgtggagcattctggaagagtctttcgacttcagtttgacgagttccagatc
gtcagcagctcgcatgatgacaccatcctcatctgggattttctgaatgacccagctgcc
caagcagaatccactcgttccccgtccagaacatacacctacatctcaagataa
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