Rissa tridactyla (black-legged kittiwake): 128912272
Help
Entry
128912272 CDS
T09443
Symbol
USP16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128912272 (USP16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtd01002
]
128912272 (USP16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128912272 (USP16)
Enzymes [BR:
rtd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128912272 (USP16)
Peptidases and inhibitors [BR:
rtd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128912272 (USP16)
Ubiquitin system [BR:
rtd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128912272 (USP16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
MMR_HSR1
zinc_ribbon_9
C1_2
Motif
Other DBs
NCBI-GeneID:
128912272
NCBI-ProteinID:
XP_054063733
LinkDB
All DBs
Position
1:complement(105376068..105397158)
Genome browser
AA seq
823 aa
AA seq
DB search
MGKKRIKGKTAQSDESPDTLEPQCKHIRKGLEQGHLKKALLNVEWHVCQDCKADNKTQEK
SEEETDESPSIWLCLKCGHRGCGRNSQEQHALKHYKTPRSVPHCLVLSLDNWSVWCYACD
NEVSYNTSTRLGQTVDYVRKQVCTDSSHTVEKQQENKEFENKKVEKDSKNEQEKEVSLKE
NSHSSTNLEVTVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKMPGTTVKIESPELFM
EPQLIKLDQPGPLTSAMYQFLTEMQETKKGVVTPKELFAQVCKKAIRFKGYQQQDSHELL
RYLLDGMRAEEIQQVSGGILKALTDSNKQNEEELKKKIKEYEKKKGIQSFVDQIFGGELT
STIMCEECRTVSLVHESFLDLSLPVLDVQKGKMTNERNIKKTKEKESEDEEDKNNDCYLK
QRDEPPGTSKHLQKKAKKQAKKQAKSQRRQQKLQGKVLHLTDICATEQSEKDVEYNQESE
AEINSEAPDTKQVIKESSSDCKDQCLAPKDLSIEGNGTEVQSMPENIGKPEQECVENESL
VDVPMEGLDSPVTFVNGLDNLSLKDEDDENEDEEELATDFSKLHLGANAESDDGTLDDLQ
SVPVKTCEVLTEDPETAFCTLANREDLNPEEGSIYHCLYQFTRNEKLTETNKLLCDVCTQ
RHYGPKNNVKSERYVYTNAKKQMLISLAPLVLTLHLKRFQQAGFNLRKVNRHIKFPEVID
LAPFCTVKCKNVAEGNTKVLYSLYGVVEHSGTMRSGHYTAYAKMRSMNNHLSDFVLQGPS
PQALETEPVKGQWFHISDTRVQAVPAAKVLSSQAYLLFYERLL
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacgcatcaaaggtaaaactgcacagtctgatgagtctccggatacgctg
gagcctcagtgcaagcatattcgtaaaggattggaacaaggtcatctgaaaaaggcactg
ctgaatgtggaatggcatgtttgtcaggactgcaaggcagacaataagacacaagagaaa
tccgaggaggagacagacgaaagcccttcgatatggttatgtctaaaatgtggccatagg
ggctgtggcagaaattctcaagagcagcatgctttaaagcattataagacgccaagatca
gtcccccattgtttggttctcagtttggacaactggagtgtgtggtgctacgcatgcgat
aacgaagtctcatataatacttcaacccgtttgggtcagactgtggattatgttagaaaa
caagtttgtactgactcgtcacatacagtagaaaaacaacaagagaacaaagaatttgaa
aataaaaaagtagaaaaagacagcaaaaatgagcaagaaaaagaagtctcgcttaaagag
aattctcattcaagtactaacttggaagtgactgtgaaaggacttagtaacttggggaat
acgtgtttctttaatgcagtgatgcagaatttatcacaaactccagtcctgagggagctg
cttaaagaagctaaaatgcctggcacaacagttaaaattgagtcacctgagttattcatg
gagcctcagctgataaaactagatcagccaggtcctttgacatcagccatgtatcagttc
ctgacagaaatgcaagagacaaaaaaaggggtagtcactcctaaggaactttttgctcag
gtttgtaaaaaagccatacgatttaaaggttatcagcagcaagacagtcatgaattgctt
cgttacttacttgatggaatgagagcagaagaaatccaacaagtaagcggtgggatactg
aaggcactgactgactctaacaaacaaaatgaagaggaacttaaaaagaaaatcaaagaa
tatgaaaagaaaaagggaatacagagttttgtagatcaaatctttggtggggagttaacc
agtacgattatgtgtgaggaatgcagaacggtatccttggtccacgagtctttccttgat
ttgtcgcttcctgtactagatgttcagaaaggaaaaatgacgaatgagagaaatattaaa
aaaaccaaagaaaaggaatctgaagatgaagaggataaaaacaatgactgttatcttaag
cagagagatgagccccctggtacaagtaagcaccttcagaaaaaagcaaagaaacaggcc
aaaaaacaagccaagagccaacgccgccagcaaaaacttcaaggaaaggtgcttcacttg
acagatatctgtgcaactgaacagtcagaaaaagacgttgagtataaccaagagtcagag
gcagaaattaactctgaagctcctgatacgaagcaagtgattaaggaatcatcaagtgat
tgcaaagatcagtgcttagctccgaaagacctgagcatagagggaaatggtacagaagtt
cagagcatgcctgaaaatataggaaagccagaacaggagtgtgtagaaaatgagtctctc
gtggatgtccctatggaaggcttagattctcctgtaacatttgtcaatggccttgacaac
ctatctttgaaagatgaggatgatgaaaatgaagatgaggaagagcttgctactgacttt
tcaaagctacacttgggtgccaatgctgagtctgatgacggtaccttagatgatcttcaa
agtgttcctgtcaagacatgtgaagtattgactgaagatccagaaacggcattttgtacg
cttgcaaacagggaggatctgaacccggaagaaggttcaatctatcactgtttgtatcaa
tttacccgtaatgaaaaacttaccgagaccaataaactactctgtgatgtatgcacacaa
agacattatggaccaaagaacaacgtaaaaagtgaaaggtatgtttatactaatgccaaa
aagcagatgctaatctctcttgctcctctggttttaactcttcacttaaagaggtttcag
caggctggatttaatctacggaaggttaacaggcacatcaagtttccagaagtgatagac
ttggcccctttctgtacagttaaatgtaaaaacgtggctgaagggaatacgaaagtactg
tactctctctatggagttgttgaacatagtggaacgatgaggtctgggcactacactgct
tacgctaaaatgagaagtatgaacaaccatctctctgattttgtccttcaaggaccatct
cctcaagctttagaaaccgaaccagtaaaagggcagtggttccacatcagcgatacccgt
gtacaagccgtgcctgcagcgaaagtgctgagctcgcaagcttatctcctgttctatgag
cgactgctgtaa
DBGET
integrated database retrieval system
