KEGG   Rissa tridactyla (black-legged kittiwake): 128912290
Entry
128912290         CDS       T09443                                 
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rtd03032]
    128912290 (RIF1)
DNA replication proteins [BR:rtd03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    128912290 (RIF1)
SSDB
Motif
Pfam: Rif1_N
Other DBs
NCBI-GeneID: 128912290
NCBI-ProteinID: XP_054063829
LinkDB
Position
7:complement(2288679..2319736)
AA seq 2335 aa
MSAPAACPGLQPLLETLEDPAAPLGDLTDAHLTIANRLTGEEGKEFTADVRKHFSQLCKV
FKAHISNQNSELSNAALQALGFCVFNSNITSGLSATEIRDLLSMVNSVAVKTSDKNTRTR
ALWVISKQAFPSEIVKKEVSSIISTLETILTKGDVQSMVVEYEALNVIIRLVEQTPAQMG
EEAVRWAKLIIPLVVHSAHKVQLRGATALEMGMPLLLQKQQEVAAVTEHLMTTKLISELQ
KLFSAKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGSPVVKKIAFIAWK
SLIDNFALNPDILCSAKRLKLLMQPLSSIHVRTEALALTKLEVWWYLLMRLGPQLPANFE
QVCVPLIQSTLSLDSSAPLQGTPSRVPANQNLALATPTPKSGPYPFASAVTPRMNLNSST
AGVVVLPSIQLLGIEMLLHFLMGPEVVDFAKQNKLALSLEPLQYPLISSPSFFCKHASTL
INAVQDGFIAIGKEVPDCMLNVIWKDINGYVKMAIESGNKKEKQGSEILTMLLQALKNTV
RSNSLPVQKILSLIDITVKELPSKVLGSPAYQVADMDLLNGTPALFLIQLPFHNNLLECC
VTDERFFVILTTLVGFVLSGPTSPLAFSESVIGILNQSAKQVENKEHLWRMWSIVVNPLT
EWINRTNEVNQGDALEHNFNAVYSALLLPVSHIFPIKEFPQPTMKSLLRTWSDLYRPFAR
CAALVATAEENLCCEELCAKIISGLEGETPVMLSMMDGLTHIISVMVDCINFAPYGTKYQ
PKNRSPQTPTDWSKKKKEPLGKLASLFKLLVMLLNSFHVFSSKEICSETLVSVGPSIIAI
LHNIISHVSLPSVIGTMFAIFSKPLAVFYEKTKLADVPKVYSDLNNKLEKLLSEIIQCLQ
SHCTGSYDSDLLAQLSPLLCVIFQHKSKQIRNQCAHFWNATFAKTTSLTYPEELKSVLSQ
AKKKIPLLLPGFESMEIAEECSGPFSDAMENSQLDARISGMEVKLGQKRDSILAQTNELK
NEVKDKSSNVQVTSAKLKLEFSSSKTKSERLLEEEQSVDFVFIPPETKERILTEHQKEVL
RSKRVDIPAMYNNLDASQDTTLFSQYTQSQEDSLGKSPVIENAKEDTKTKPQEENARSER
RTSKSDEIAEDCKPDNPLENAACVEKSPVTHIKESSTSNSEGESQRDVAEAAPEEPSVGE
GLEKSTVEAASKEPSVGNKNTSNVSSSSTSSDIISGTPQPVSRRQSFITLEKFGSSENRP
FSISALNSFSEMSGSASVAGKQENTNVCKTGAKPEKSGEDKKPSKFETEQIVTAIRRLTR
RQSKMEHQGNKQSKLLVRSEQEKSMQESSASSSMENSPELSSTVEDVEHVLLAQSQALHS
TEEEIKKVEDTIAEIEKVRVLDMDSKENTPPETTVSPDQVTGDDSQVPHVSPNQKIPRRS
SRRRSETVESTSGSQDKEDGHQKRDRRKDDEKSGQKKVPQAKDDVSQKQKAVSGKTTENT
NKKESKLLERTAAEDISSKESPASRGLDEEVNKSGRRSEDNSKTDTEGQDCSSSTVDQRK
MERPRYHTRRASQGLLSSIENSEADGSETKEESTRKKRLAKAKSRSDSLEGKLKDPQPGG
RSHEASSHRNETKNVLETNEGELSPEVGTDAELTSEVCEPKHQEMPADPVKAVASASSRD
SSDAQNADVEQKSSTSMEPFPNPCVSDPDLKAPEENKPVKKQTNSEDSCPTVLPQQVPGG
NASGGDLSSLQIPECQHKRSKRVKRLRNCDCCSTKPKQRVMSVAEPKNENTLELNEPQAT
PVQTPVNTSEVSGNSSLDESLSMAPCAMSTPLHLPKEPRAFDLEGERTSEDDLQGSSVVA
QEGVENPEHTAGEITDSVVETREPADQSDPTEQRLSERGAEEPGDSSVLAGNCSEEPSAT
EKEEISQSEQLEEIPGALIVAIKPEKNQVDELESNQGDEEAAESTVGETCVIQDIEMKEE
LVKTEITVPESAALDKEDAVKNNSVDSPQKPEDHNSLALVNESPNGMQARCTWSPSASPS
TSILKRGVKRNQDDDSLSPANKIRRVSFANPIYQEGLADDIDRRSPVVRSHSSSPSSRSL
KILSNIQAKHITTPTKGFLSPGSRNPKFKSSKKCLITEMAKESLPCPAECVYPALVGCKA
PVDVILPQITSNMCSARGLGQLIRAKNIRTVGDLSTLTASEIKTLPIRSPKVSNVKKALK
GYHEQQVKSRGFEEMSALEDAEKPVNNVEDKSLPVDEEKLATDLLEPVVLNADEQPAADL
LSQIDALAAQLASEDLHGYSGSQLFEMQEKLIGMTNCIMKNLQSRWKSPPRESSD
NT seq 7008 nt   +upstreamnt  +downstreamnt
atgagcgctcccgccgcctgccccggcttgcagccgctgctggagaccctggaggatccg
gccgccccgctgggggacctcactgacgcgcatctcactatcgccaatcgcttgacgggt
gaggaaggcaaagaattcactgcagatgtcagaaaacacttttctcaactttgcaaagtg
tttaaggcacacatttctaatcaaaactcagagctaagtaatgcagcattacaggcatta
ggattctgcgtttttaattcaaacattacatctggattatctgcaactgaaatacgagac
ttgctttcaatggtgaacagtgttgctgtaaaaacttcagacaaaaacactcgcactcgg
gcactttgggtgatctctaagcaggcgtttccttctgaaattgttaaaaaggaggtgtcc
agtataatttctaccctggaaacaatacttactaaaggagatgtacaatctatggtggtt
gaatacgaagcactaaatgttattatacgcttggtggagcaaactccagcccagatggga
gaggaggctgtgaggtgggcaaaactgatcattcctttggtcgtccattcagctcacaag
gtgcagttacgaggtgccactgctctggagatgggcatgccactgctgctccagaaacag
caggaggtagcggctgtcactgagcacctaatgaccacaaaattaatttcagaacttcag
aaattgttttctgcaaaaaatgagacttacgtgctaaaattatggccgctgtttgtcaaa
ttacttggaaagactctgcatcgtagtggcagttttatcaactcattgctgcaactggag
gaacttggatttcgtagtggctcaccagtggtaaagaaaatagccttcattgcgtggaag
agtctaatagataattttgctctaaatccagatatattgtgcagtgctaaaaggctgaaa
ctgctaatgcagccgctgagctcgatccatgtgagaacagaggctttggcactgacaaaa
ctggaggtctggtggtatttgctcatgaggctaggacctcagctgcctgcaaactttgaa
caggtttgtgtaccgttaatccaaagtactttaagtttagattcttctgctccattgcaa
ggaactccctcgcgtgtaccagctaaccaaaatttagccttggcaacccctacaccgaaa
tcaggtccttacccgtttgcaagtgcggtcacaccaaggatgaacttgaattctagtaca
gcaggagtggtggtgttaccttccattcagcttttgggaattgaaatgctgcttcacttc
ttgatgggaccagaagttgtagattttgctaagcaaaacaaacttgcacttagtttagag
cctctccagtacccactgatcagtagcccttcttttttttgtaagcatgccagcacactt
ataaatgcagttcaggatggctttattgcaattggaaaagaagttcctgattgtatgctg
aatgttatatggaaggacataaatggatatgtaaaaatggctattgaatcaggaaataag
aaagaaaagcaagggtcagaaatactgactatgttgctccaggccttaaaaaacactgtt
agatcaaattctcttcctgtgcagaaaatactgtctctcattgatattactgttaaggaa
ttgccttcaaaagtattgggatcaccagcttatcaggttgctgatatggatcttttaaat
ggaacaccagctctgttcttaattcagctgcctttccataataacctcttggaatgctgt
gtaacagatgagagattctttgtaattctaacaacgctcgtgggttttgttttgtctggg
cctacgtctccgctggctttcagtgaatctgtgatcggcattcttaatcagagcgcaaag
caagtggaaaataaagagcatctttggagaatgtggagtattgttgttaatccgctgacc
gaatggattaatcggactaacgaagtaaatcagggtgatgcactggaacacaacttcaat
gctgtttatagtgcattgttgctaccagtatcgcatatcttccccattaaggaatttcca
cagccaactatgaaatccttgttgcgcacttggtcagacctgtatagaccatttgctcgc
tgtgctgctttagttgcaacagcagaagaaaacctatgctgtgaagaactttgtgccaaa
ataatatctgggctagaaggtgaaactccagtaatgttatcaatgatggatggtctcacc
catattatatcagttatggttgactgcatcaactttgcaccatatggtactaaatatcag
ccaaaaaatagatctccacagacacctacagattggtctaagaagaaaaaggaacccctt
ggaaagcttgcctctctatttaaactcctggtgatgttactaaactctttccatgtgttc
agttccaaagaaatctgttcagaaacattggtctctgttggtccttcaattattgctatt
cttcacaacatcatcagccacgtttcattgccttcagtgattgggactatgtttgcaatt
ttttcaaaacccctggcagtgttttatgaaaaaacaaagcttgctgatgtacctaaagta
tacagtgatcttaacaacaagcttgaaaaactcctgtccgagatcatccagtgtttacag
tctcactgcactggctcgtatgacagcgatctgctagcgcagctttctccgttgctctgt
gtaatatttcagcacaagagcaaacagatacgcaaccagtgtgcccacttctggaacgcg
acattcgctaagacgacgtcattgacgtaccctgaagagttaaagtctgtgttaagccaa
gccaaaaagaaaatcccactcttgctgcctggttttgaaagcatggagatagccgaagaa
tgcagtggcccgttctctgatgcgatggaaaactcacagctggatgcaaggataagtgga
atggaggtaaagttgggtcaaaaacgagactctatattggcacagacgaatgaactaaaa
aatgaagtaaaagacaagtccagtaatgtgcaagtaacatctgcaaagttgaaactagaa
ttttcatcttcgaagactaaaagtgagagacttctggaagaggagcaatctgttgacttt
gtgtttattcctccagaaacaaaagaaagaatactaacagaacatcaaaaagaagtgctt
aggtcaaagagagttgatattcctgcaatgtacaacaatttggacgcatcgcaagatact
accttattttctcagtatactcaaagccaggaagattctttgggaaaatcacctgtaata
gaaaatgcaaaagaagatactaaaaccaagcctcaggaagaaaatgcaaggagtgaaaga
cgcaccagcaaatcggatgaaatcgcagaggactgcaaaccagataatccactggagaat
gctgcctgcgtggaaaagtcacccgttactcacatcaaggagagctcaacttccaacagt
gagggagagtcacaaagggatgtggctgaagcagctccggaggagccatcggttggagag
ggattagaaaaaagtactgtggaagcagcttcaaaggagccctcagtagggaacaaaaac
acttcaaatgtcagcagcagttcaacgtcaagtgacatcatttccggaacaccgcagccc
gtgagccgacggcagtcttttattactttggagaaatttggtagttcagagaacagaccc
tttagcatttcagcattaaacagtttctccgagatgtctggaagtgcttctgtggcaggg
aaacaggaaaacacaaacgtatgcaagactggtgctaaaccagagaaatctggagaagat
aaaaagccttcaaaatttgagactgaacaaatagttactgcaatacgaaggctgactcgc
aggcagagtaaaatggagcaccaaggaaataagcagtccaagctgttggttaggtcagaa
caagagaaaagcatgcaagagtcttctgcttccagcagtatggaaaacagtcctgaactc
tcttctacagtagaagacgtggaacatgttctccttgctcagtcccaggctctccattcg
acagaagaagaaattaaaaaagttgaagatacaatagcggaaatagaaaaggtccgggtg
ttagatatggattctaaagaaaatacacccccagagacgaccgtgtcacctgaccaggta
acaggggacgatagtcaggttccacatgtgtctcctaatcagaagataccaagacgttct
tcaagacgacggtcagaaaccgtagaaagtacatcaggcagtcaagataaggaagatggc
caccaaaagagagacagacgtaaagacgatgaaaaatctgggcaaaagaaggtgccgcag
gcaaaagatgatgtatcccaaaagcagaaagcagtttctgggaaaactacagaaaataca
aataaaaaagaaagcaagctactggagagaactgctgcagaggacataagctcaaaggag
tctcctgcttcaaggggccttgacgaggaagtgaacaaaagtggtaggaggtcagaagat
aactcgaagactgacacagaaggtcaggactgtagctcgagcacagtagatcagaggaag
atggaacgcccgcgataccacacaagacgagcttcacaagggttgctttccagcatagaa
aactcggaggctgatggctccgagaccaaggaagaaagcacgaggaagaaaagattggca
aaagcgaagagcagaagtgattctcttgaaggtaaattgaaagatccacagccaggaggc
cgcagccatgaggcgtcttcccacagaaacgaaaccaagaatgtgttggaaacaaatgaa
ggtgaactaagccctgaagtcggcacagatgctgagttgacctctgaagtgtgtgagcca
aagcaccaagaaatgcctgcagatcctgtcaaagctgtggcatctgccagctccagggat
tcgtctgatgcacagaatgcagatgtggaacaaaagagcagtacatcgatggaaccattc
cccaacccctgtgtatctgatccggatttgaaagcaccagaggaaaataaacctgttaag
aagcaaacaaattcagaagacagttgtccaactgttctgcctcaacaagtaccaggagga
aatgcttcaggtggtgatctctcttctttgcaaatacctgagtgtcagcacaaaagaagc
aaaagggtaaaaagactaaggaactgtgattgctgtagtacaaagccaaagcagcgagta
atgtcagtcgctgaaccgaaaaatgagaacactcttgagctgaacgagccccaggccacc
ccagttcagacgcctgtcaatacatcggaggtgtctggtaattccagtttggacgagagc
ttgtccatggcaccgtgtgccatgagcactccattgcaccttcctaaggaacccagggcc
tttgacttggaaggagagagaacatctgaagatgatctgcaaggaagtagtgttgtagcg
caggagggtgtagagaacccagagcatacagcaggtgaaattaccgactccgtggtggaa
acgagagaacctgctgatcagagtgacccaactgagcagcgtctgtctgagcgtggtgca
gaagagcctggtgacagctctgtgctggcagggaattgcagcgaagaaccatcggctaca
gaaaaggaagaaataagtcagagtgaacaactggaggagatacctggggcactgattgtt
gctatcaaacctgagaaaaatcaggtggatgagctagaaagcaatcagggtgatgaagaa
gcagctgagagtactgtaggagaaacctgcgttatccaagatatagagatgaaggaggaa
ttggtgaaaactgaaatcacagtgcctgaaagtgcagctttagacaaagaagatgctgta
aaaaataacagtgtggattcacctcaaaagccggaagaccacaattctttagcgttagtt
aatgaaagccccaacgggatgcaggctcgctgcacgtggtctccctcagcttctccatcc
actagtattttaaagagaggagttaaaagaaatcaagatgatgattccctgtcacctgct
aataagattcgccgagtctcttttgcaaacccaatttatcaagaaggactggccgatgac
atcgacaggaggagtcctgtcgttaggtcccattcttcttcaccatcttcccgaagcctt
aaaattttatctaatattcaggctaagcatattaccactccaaccaaaggatttctgtcc
ccaggatctcgtaaccctaaatttaagagctcaaagaagtgtttaattacagaaatggcg
aaggaatcgctgccttgccctgcggaatgcgtgtatcccgccttagttggctgcaaagca
ccggttgacgtcattctacctcagatcacatcgaacatgtgcagcgccagaggcctgggg
cagctcattcgggcaaagaacatcaggacggtgggtgacctgagtactctgacagcatcc
gagatcaaaaccctgcccatccgctctccgaaagtttccaatgttaaaaaagccctgaaa
ggatatcatgagcaacaggtaaaatctcgaggatttgaggaaatgtcagcgcttgaggat
gcagaaaaacctgtaaataacgtagaggataaatctcttcctgtagatgaagaaaaactt
gcaacagatctgctggaaccagttgtcctgaacgcggatgagcagccggcagcagatctg
ctgagccagatcgacgcgcttgcggctcagctcgcctccgaagatcttcacggctattcg
ggaagccagctctttgagatgcaagaaaaactcattgggatgacgaactgtatcatgaaa
aacctgcagtcccgctggaaatcgccaccccgtgaaagttccgattag

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