Rissa tridactyla (black-legged kittiwake): 128912342
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Entry
128912342 CDS
T09443
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128912342 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128912342 (RABGEF1)
Membrane trafficking [BR:
rtd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
128912342 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
128912342 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
128912342
NCBI-ProteinID:
XP_054064018
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All DBs
Position
7:complement(53970796..53996432)
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AA seq
539 aa
AA seq
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MNLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAYASSQSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFTASSRTGAKKVAQEK
IVKQGQLGRERNADNILRDLKEIFTPSWELASPTEVLAGKLKAEIQEAKAPSPSINRQAS
IETDRVSKEFIEFLKTYHKPGQDIYKQCKLFLDTMNHKRDLSIEEQSECAQDFYQNVAEK
LQTRWKVPPEKVEKAMDQIEKYIMTRQYKYVFCPETTDDEKKDLAVQKRIRALHWVTPQM
LCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASA
DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ
SLNLSQEDFDRFMTGQTSPKKQESDSFSPDVCLGVKQMYKNLDLLSQLNERQERIVNEAK
KLEKDLIDWTDGITKEVQDIVEKYPLEIKPKNQALAAIDSENVENDKLPPPLQPQVYAG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaaatctgaacgcagaggaattcacgttgatcagtcagagctactgtgcaag
aagggatgcggttactatggcaatcctgcttggcagggattttgctccaagtgctggaga
gaggaataccataaggccaggcagaaacagattcaagaggactgggagctggcagagcgg
cttcagcgtgaggaggaagaagcatatgccagtagtcagagtacccaaggggcgcagtcg
ctgaccttttcaaaatttgaagaaaagaaaaccaatgagaaaacccgaaaggtcactact
gtgaagaagttcttcactgcttcttccagaacaggagctaagaaggtggctcaagagaaa
atcgttaagcaaggacagcttgggagggagcgaaatgctgataacattctcagggatttg
aaggaaattttcactccctcctgggaactggcttcccctactgaagtcttggctggcaag
ttgaaagcagagatccaagaagccaaggctcccagcccttccataaacaggcaggctagc
atcgagacagatcgagtatccaaggaattcatagaatttctcaagacctatcataaacct
ggacaagatatctataagcaatgtaaactgtttttggacacaatgaaccataaaagggac
ttaagtattgaggagcaatctgagtgtgcccaggacttctatcaaaatgtagcagagaaa
ttacagacacgctggaaagtgccccctgaaaaagttgagaaagcaatggatcagattgaa
aaatacattatgactcgacagtataaatacgtcttttgtcctgaaacaactgatgatgag
aagaaagatcttgctgtccaaaagagaatcagggctttgcactgggtaactccacaaatg
ctgtgtgttcctgtcaatgaagagattccagaagtctccgatatggttgtaaaagcaatt
acagatattatcgaaatggattcaaagcgtgtccctcgtgataagttagcatgcatcacc
aagtgcagcaagcatatatttaatgctattaaaatcacaaaaaatgaaccagcttctgct
gatgactttcttccaacgcttatatacattgttttgaagggaaacccgccccgtctgcag
tccaacatccagtacataacacgcttctgcaatccaagcaggctaatgacaggagaagac
ggctactattttaccaatctgtgctgtgctgtggccttcattgaaaaactggatgctcag
tctttaaatctaagccaagaagattttgatcgttttatgactggtcagacatccccgaag
aagcaagaatctgacagtttttcacctgatgtgtgcctgggtgttaagcaaatgtataaa
aacttagacctactatctcagttgaatgagagacaggaaagaattgtcaatgaagccaag
aagctcgagaaagacctaatagattggactgatggaattacaaaggaagtccaagatatt
gttgagaaatatccattagaaataaaaccaaaaaatcaagccttagcagctattgactct
gaaaatgtggagaatgacaagctacccccaccgctgcagcctcaggtttacgcaggataa
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