Rissa tridactyla (black-legged kittiwake): 128912423
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Entry
128912423 CDS
T09443
Symbol
SPOPL
Name
(RefSeq) speckle-type POZ protein-like isoform X1
KO
K10523
speckle-type POZ protein
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128912423 (SPOPL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128912423 (SPOPL)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
128912423 (SPOPL)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
128912423
NCBI-ProteinID:
XP_054064235
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Position
7:complement(6804359..6840023)
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AA seq
392 aa
AA seq
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MSRVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNTNTLK
VPECRLAEDLGNLWETTRFTDCSFYVGGQEFKAHKSVLAARSPVFNAMFEHEMEESKKNR
VEINDVDPEVFKEMMRFIYTGKAPNLEKMADNLLAAADKYALERLKVMCEEALCSNLSVE
NVADILILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNQATDIMETAGWKSMI
HSHPHLVAEAFRALASAQCPQFGIPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggttcccaccccacctcctcctggggagatgtccagtggacctgtcgctgaa
agctggtgttacacacaggttaaagtagtaaaattttcctacatgtggaccattaataac
ttcagtttttgccgagaagaaatgggtgaagtcttaaagagttctaccttttcgtcaggg
ccaaatgacaaaatgaagtggtgcctgagagtgaatccaaagggattagatgatgaaagc
aaagactacctgtcattatatttgcttttagtcagttgtccaaaaagtgaagtcagagca
aaattcaaattttccctgctgaatgctaaaagagaagaaacaaaagcaatggaaagccaa
agagcgtatcgatttgtgcaaggcaaggactggggttttaagaaatttatccgaagagat
tttttactagatgaagctaatggtcttctaccagatgacaagcttacgttattttgtgag
gtaagcgtggtccaagactcagtaaatatatcaggacagtctaatacaaacactttgaag
gtacctgaatgtcgactagcagaagatttagggaatctctgggaaacaacaagatttaca
gattgcagtttttatgtaggaggacaagaattcaaagctcataaatctgtccttgcagca
cgatctccagtttttaatgcaatgtttgaacacgaaatggaggaaagcaaaaagaatcga
gtagaaataaatgatgtagaccctgaagtttttaaagaaatgatgagattcatttacacg
ggaaaagcaccaaaccttgaaaaaatggctgacaatttgttggcagctgcagacaaatat
gcactggaacggctgaaggtcatgtgtgaggaagcactctgtagtaacctctcggtagaa
aatgttgctgacattcttatcctcgcagatttgcacagcgctgaacagttaaaagcacaa
gcaatagactttattaacaggtgcagtgttcttagacaacttgggtgtaaagatgggaaa
aactggaatagcaaccaagcaacagacataatggaaacagcaggctggaagtccatgatc
cactcccaccctcacttagtagcagaggcctttcgcgcactagcatctgcacagtgtcca
cagtttggcattccacgcaaacggctaaaacagtcatga
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