Rissa tridactyla (black-legged kittiwake): 128912504
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Entry
128912504 CDS
T09443
Symbol
TSR1
Name
(RefSeq) pre-rRNA-processing protein TSR1 homolog
KO
K14799
pre-rRNA-processing protein TSR1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtd03009
]
128912504 (TSR1)
Ribosome biogenesis [BR:
rtd03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
128912504 (TSR1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
Phage_gp49
Motif
Other DBs
NCBI-GeneID:
128912504
NCBI-ProteinID:
XP_054064511
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Position
7:53239081..53248331
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AA seq
810 aa
AA seq
DB search
MVAAGAHRPGPLKQQNKAHKGGKHSGASQRRAGGRLSVKAQPRRRLRDLSRVDRRHQALQ
LRRQRKEAVLAEKRSLGSRDGPPHLVVLVPLHSRAAAHNTLRLLQSQDSAVVRVGEGRAG
GFALLCPRLKQRWRFVTAQAGDLHAVLDLAKVADSLLFILDPADGWDSAGEYCLSCLFAQ
GLPSYALAVPGGTDLPSKKRIDARKKLAKAIEKRFPEAKLFPLNTEQESSLLLRHLATQK
QRHLAFRDRRAHLLAYAAEFVPGQESDLVGTLKVSGFVRGQTLDVNSLVHIVGHGDFQMS
QVDAPPDPLSLNPRVVKGQKRSQDMEIQDDSVNGTDDMEEDVKVLMKADPNKQESLQSEV
VPDPMEGEQTWPTEEELQEAEASLKANRKVVKVPKGTSKYQAAWIVDDEEEGSQEDDDDG
DEDDDVDDDMMEEAVSQEGESSEEGEEHAEEECETMTVSECLRDDQYDEKMEEDEEMLER
YKQERMDEMFPDEVDTPRDVPARVRFQKYRGLKSFRTSPWDPKENLPRDYARIFQFQNFS
QTRKRLFRQIEKEETEGASVGWYVTLHVCNVPVSVMESFKEGKPLVLFSLLPHEQKMSVL
NFLVRRHPSNSEPVRAKEELIFHCGFRRFRASPLFSQHTSADKHKLERFLRLDAALVVTV
YAPITFPPASVLLFKQRSNGMHDLIATGSLLSVDPDRIVIKRLVLSGHPFKIFSKTAVVR
YMFFNREDVMWFKPVELRTKWGRRGHIKEPLGTHGHMKCHFDGQLKSQDTVLLNLYKRVF
PKWTFDPHVPEPVPWVRSESVLPVQEVEMD
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggcgggcgcccaccggcccgggccgctgaagcagcagaacaaagcgcacaag
ggcgggaagcacagcggggcgtcgcagcgccgtgctggaggccgcctctccgtcaaggcc
cagccccgccggcggctccgcgacctcagcagggtggaccggcggcaccaggcgctgcag
ctccgccggcagcgcaaggaggcggtgctggcagagaagcggagcttgggaagcagggat
gggcccccgcacctcgtggttctggtgccgctgcacagcagggctgcagcccacaacacc
ctccgcttgctacagagccaggactcagcggttgtccgcgtgggtgaggggagagctggt
ggctttgcactcctctgtccccgactcaagcagcgctggcgcttcgtgacagcacaggca
ggggaccttcatgctgtcttagacctagcaaaggtcgctgactccctcctgttcatcctg
gatcctgcagatggctgggacagcgcaggggagtactgcctctcctgcctcttcgcacag
gggctccccagttacgctcttgctgtcccagggggtactgacttgccatctaagaagcgg
atagatgccaggaagaaactggccaaagccattgagaagcgctttccggaggccaaactc
ttccccctgaacacggagcaggagtcctcgctgctgctgaggcacctcgccacccagaag
cagcggcatctcgcttttcgggacagacgggctcacctgctcgcctacgctgctgagttt
gtacccggtcaggagagcgacctggttgggaccttgaaagtgtctggctttgtccgggga
cagaccctcgacgtgaacagcctggtgcatattgtggggcatggagacttccagatgagc
caggtggatgccccccccgaccccctctccttgaacccccgagtggttaaaggacagaag
aggagtcaggacatggagatacaggatgactctgtaaatggtaccgatgacatggaggaa
gacgttaaggtcctgatgaaggcagatccaaacaagcaggagtctttgcagtcagaagtg
gttcctgatcctatggaaggggagcagacgtggcctaccgaagaagaactgcaagaggca
gaggcttctctgaaggcaaacaggaaggtggtaaaggtccccaaaggcacatccaaatac
caggctgcctggattgtggatgatgaagaggagggcagtcaagaagatgatgatgatgga
gatgaagatgatgacgtcgatgatgatatgatggaagaggcagtttcccaggagggggaa
agcagcgaggagggagaggaacacgcagaggaggaatgtgagaccatgactgtttccgag
tgcttgcgggatgaccagtacgatgagaagatggaggaagatgaagagatgctggagaga
tacaaacaggagagaatggatgaaatgtttccggatgaggtggacacgccacgtgatgta
cctgcaagagtccggttccagaagtacagggggctgaagagcttccggacttctccatgg
gaccccaaagagaatctcccaagggattatgccaggattttccagttccagaacttctcc
caaaccagaaagcgcctcttccggcaaatagagaaagaagagactgaaggagcctcggtt
ggctggtacgttacacttcatgtctgcaatgtccctgtctcagtgatggagagcttcaaa
gaagggaagcccctagtcctgttctcgctgcttccccatgaacaaaagatgtccgtgttg
aatttcctggtgcggcggcatccaagcaacagtgagccagtgagggcaaaggaggagctc
atctttcactgtgggttcaggcgcttccgagcatcccccctgttctcccagcacacctca
gctgataagcacaagctggagcgtttcctgcgcctggatgctgccctggtggtgaccgtt
tacgctcccatcactttccctcctgcctcagtgcttctttttaaacagagaagtaacgga
atgcacgacctcattgccacgggttctctgctttctgtggacccggacagaatcgtcatc
aagcggctagtgctcagtggccaccccttcaagatctttagcaagacggctgtcgtgcga
tacatgttctttaacagagaggatgtgatgtggtttaagccagtggagctgaggacaaag
tggggtcgtagaggacacatcaaggagccattagggacccatggtcacatgaagtgtcac
tttgatggacagctaaagtcccaggacacggtgctgctgaacctctacaagcgtgttttt
cctaaatggacttttgacccccatgttccggagcccgtgccgtgggtgaggagcgagagt
gtgctgccggtgcaggaggtggaaatggattaa
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