Rissa tridactyla (black-legged kittiwake): 128912530
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Entry
128912530 CDS
T09443
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03030
DNA replication
rtd03420
Nucleotide excision repair
rtd03430
Mismatch repair
rtd03440
Homologous recombination
rtd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128912530 (RPA1)
03420 Nucleotide excision repair
128912530 (RPA1)
03430 Mismatch repair
128912530 (RPA1)
03440 Homologous recombination
128912530 (RPA1)
03460 Fanconi anemia pathway
128912530 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128912530 (RPA1)
03032 DNA replication proteins [BR:
rtd03032
]
128912530 (RPA1)
03400 DNA repair and recombination proteins [BR:
rtd03400
]
128912530 (RPA1)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128912530 (RPA1)
DNA replication proteins [BR:
rtd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
128912530 (RPA1)
DNA repair and recombination proteins [BR:
rtd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
128912530 (RPA1)
MMR (mismatch excision repair)
128912530 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
128912530 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
MAML1_3_TAD2
DUF4939
Motif
Other DBs
NCBI-GeneID:
128912530
NCBI-ProteinID:
XP_054064569
LinkDB
All DBs
Position
7:complement(53472256..53495648)
Genome browser
AA seq
613 aa
AA seq
DB search
MSVQLTEGAIAAIMQGECVSKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQ
LNSLVEEERLSAQCICQVNRFIVNSLKDGRRVVILMDLNVLKTADKVGGNIGNPVPYNEG
QGQQRSSAPAANPAPSKPQQQNGNLSVAGPAAPKYHAPSNQFGKASALSAVKTPGGSQAK
VVPIASLNPYQSKWTICARVTQKGQIRQWSNSRGEGKLFSIELVDESGEIRATAFNDQAD
KFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFEFV
SISDLENKPKDSIVDVIGICKSYEDVTKIIVKANNREVSKRNVHLMDTSGKLVTATLWGH
EAEQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLE
CASISDVRGGPASGMNTNWKTLFEVKSENLGQGDKADYFSCVATVVHLRKENCMYQACPS
QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADSLEYQWLTCFQETAELILGQN
AAFLGELKEKNEQAFEEVFQNANFNTYEFKIRVKQETYNDESRIKATAVDVKPVNYRDYS
KRLIASIRRNAQL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcagctgactgagggcgccatcgcggcgataatgcagggggagtgcgtctcc
aagcccgtgctgcaggtcatcaatacacgggctattgctacaggaaatgggccaccgcgt
taccgagtgttgatgagtgatggagttaacacgctctcctcattcatgttggcaacgcag
ctgaactctctggtggaagaggaacgcttgtcagcccagtgtatttgccaggttaacaga
ttcattgtcaacagcctgaaagatggaaggagagtggttatactgatggatttaaatgtt
ctgaaaactgctgataaggttggtgggaatattggcaatccagtgccatacaatgaaggg
caagggcagcaacgttcttcagctccagctgcaaatccagcacccagcaaaccacagcaa
caaaatggcaatttgtcagtagcaggtcctgctgctccgaagtaccatgctccctcaaac
cagttcggtaaagcgagtgctctgagcgcggtgaagacaccagggggatcgcaggccaaa
gtagtgccgattgccagcctgaacccataccaatctaagtggaccatttgtgctcgtgtt
acccaaaaaggccagatccgccagtggagcaactcccgtggtgaaggaaagctcttttct
atagagctagttgatgaaagtggtgagattagagcgactgcattcaatgatcaagcagac
aagttctttccactcattgaattgaacaaggtatattattttaccaaaggcaatttgaag
actgctaacaagcaatatacagctgttaagaatgactatgagattacattcactaatgag
acttcagttgtgccctgtgatgatgcccagcatcttccatctgttcagtttgagtttgta
tccatctctgacttggagaacaagcccaaagactcaattgttgatgtaattggaatttgt
aagagctatgaagatgtcactaaaattatagtgaaagctaacaatagggaggtatcgaag
aggaacgtgcatctgatggatacatcagggaaactggtgacagctacgctatggggacac
gaggcagaacaatttgatggttctagacaacctgtgatagccatcaaaggagcccgagtc
tctgatttcggtggtagaagcctgtctgtcctgtcctcaagtacagttgtcatcaaccct
gatagcccagaggcttttaagctccgaggatggtttgactccgagggccagcttctggaa
tgtgcctcaatctccgatgtgaggggtgggccggcgtctgggatgaataccaattggaaa
actttgtttgaagtcaaatctgagaacttgggacaaggagataaggcggattattttagc
tgtgtggccacagtagtacatctgcgcaaagagaactgtatgtaccaggcatgtccctct
caggattgcaataagaaagtgatagaccaacaaaatgggctgtatcgttgtgagaagtgt
gatcgtgaattccccaacttcaagtaccgcatgatgcttctggtgaccattgcagacagt
ctagagtatcagtggctgacatgtttccaagagacagcagaactcattcttgggcaaaac
gcagctttcctgggagaactgaaggaaaagaacgagcaggcatttgaagaagtgttccaa
aatgcaaacttcaacacgtacgagttcaagatccgagtaaaacaggagacttacaacgat
gaatcccgtattaaggctacagcagtggacgtcaaacctgtgaactacagagactacagc
aagaggttgatcgcaagcatcaggagaaatgctcagctatag
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