Rissa tridactyla (black-legged kittiwake): 128912568
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Entry
128912568 CDS
T09443
Symbol
TAF15
Name
(RefSeq) TATA-binding protein-associated factor 2N isoform X1
KO
K14651
transcription initiation factor TFIID subunit 15
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128912568 (TAF15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtd03021
]
128912568 (TAF15)
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128912568 (TAF15)
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128912568 (TAF15)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
128912568 (TAF15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
128912568
NCBI-ProteinID:
XP_054064704
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All DBs
Position
7:complement(54852633..54875631)
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AA seq
479 aa
AA seq
DB search
MEQCMCVLCICICYMQLNWETKLILEVTVSLGASRAIRPMAIRAVKITDKHRDILVMGRV
ETIPPMDRTMEAIMGTMDKIKQVMDKIPRDMMMNPVMKIRIRARTTSSLTAVRGSRKGRL
EVEEALMNKSQTMVSTKALMTSSQAMDKTKTLMTSSQAHMTSSRAMATRAHMTNSRAMAT
RAHMTKSQAITSTKAHMAILSSPTSLRREAIATTAKMIVVKRVGMEKIIEDMAGHREEVE
GDMTWMEEVICLDMGQRDYGPRSDADSESDNSDNNTIFVQGLGEDVSTDQVADYFKQIGI
IKTNKKTGKPMINLYTDKDTGKPKGEATVSFDDPPSAKAAIDWFDGKEFNGNVIKVSFAT
RRPEFMRGGGGGGRRGSRGGYGRGGGFQGRSGEPKNGDWVCPNPACGNMNFARRNSCNQC
GEPRPEDSRPSGDFRGRGGYGGERGYRGRGGRGGDRGGGYGGKMGGRNDFRNDQRNRPY
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggagcaatgcatgtgtgttttgtgcatctgcatctgttacatgcagctgaattgggaa
actaaattgattctggaagttacagtcagtctgggggccagcagagctattcgtcctatg
gcaatcagagcagtcaaaattacggacaaacacagggatattctggttatgggcagagtg
gagacaattcctcctatggacagaactatggaagctatcatgggaactatggacaaaatc
aaacaggttatggacaagattcccagggatatgatgatgaatccagttatgaaaatcaga
atcagagctcgtacaaccagcagtcttacggcagtcaggggcagcagaaagggtcgtcta
gaggtggaagaggctcttatgaacaaaagtcaaactatggtcagcaccaaagctcttatg
accagcagtcaagctatggacaaaaccaagactcttatgaccagcagtcaagctcatatg
accagcagtcgggctatggccaccagggctcatatgaccaacagtcgggctatggccacc
agagctcatatgaccaaaagtcaggctataaccagcaccaaagctcatatggccattctc
agcagtcctaccagtctcagaagggaagctatagccacaacagccaagatgatcgtcgtg
aaaagagtaggtatggagaagataatagaggatatggcgggtcacagggaggaggtagag
ggggatatgacatggatggaagaggtcatatgtctggatatgggtcaaagggattatgga
ccaagatcagatgctgattcagagtctgacaactctgataacaacactatcttcgtgcaa
ggacttggagaggatgtttcaacagatcaagtggcagactatttcaaacaaattggtatt
ataaagaccaacaaaaagactggcaaacctatgataaatctttatacagataaggatact
ggcaaaccaaagggagaagcaacggtatcttttgatgaccctccttctgctaaagcagca
attgactggtttgatggaaaagaattcaatggcaatgttatcaaagtttcttttgcaact
agacggcccgagttcatgagaggaggtggaggtggtggacgtcgaggttcacgaggtggc
tatggaagaggtgggggcttccagggtagaagtggggaacccaaaaatggtgattgggtt
tgtcctaacccggcctgtggtaatatgaacttcgctcgcaggaattcctgcaaccagtgt
ggtgaacccagaccagaagactcacgtccatcaggagattttcgtgggagaggtggctat
ggaggagaaagaggatatcgaggtcgtggtggcagaggcggcgatcgaggaggcggctat
ggtggtaaaatgggaggaagaaatgatttcagaaatgatcaacgcaacagaccatactga
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